Eaur021809.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637668.1:943410-945497[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2.2e-05 0.0015 19.3 6.5 1 23 7 30 7 30 0.95 2 18 5.7e-05 0.004 18.0 0.1 2 23 36 58 35 58 0.95 3 18 2.1e-05 0.0015 19.4 0.1 2 23 67 89 67 89 0.96 4 18 0.00018 0.012 16.5 2.2 2 23 97 119 96 119 0.96 5 18 0.00022 0.016 16.2 0.1 2 23 127 148 126 148 0.96 6 18 2.4e-06 0.00017 22.3 3.1 2 23 158 179 157 180 0.94 7 18 4.2e-06 0.0003 21.6 3.7 1 23 186 209 186 209 0.98 8 18 2.2e-05 0.0015 19.3 0.4 2 23 225 247 224 247 0.96 9 18 0.036 2.5 9.2 0.8 2 23 304 326 303 326 0.94 10 18 0.002 0.14 13.1 3.1 1 23 343 366 343 366 0.96 11 18 8.7e-06 0.00061 20.6 1.2 2 23 373 395 372 395 0.96 12 18 0.00059 0.041 14.8 5.1 2 23 402 424 401 424 0.92 13 18 9.3e-05 0.0065 17.4 2.5 1 23 430 453 430 453 0.98 14 18 0.019 1.4 10.1 3.7 2 23 461 483 461 483 0.94 15 18 0.057 4 8.6 1.4 1 23 490 513 490 513 0.94 16 18 1.2 85 4.4 0.0 2 20 521 539 520 543 0.84 17 18 0.017 1.2 10.2 2.8 2 23 557 579 557 579 0.96 18 18 0.35 24 6.1 0.3 1 12 628 639 628 645 0.83
Sequence Information
- Coding Sequence
- ATGGCACAATTAACAGACTTCGTCTGCGACTACTGCCATCGTAACTTCACAAGAAAGTACAACCTGCGCACTCACATAGAAAACTGTCACTTATACAGCTCAAGCTACTGCGGCGTGTGCGACCAAACCTTCTCCAGCCCTGCCAGCTTAGCCCAACACCAGAGCAAAGGCCACAACCGTTTCGGCCAAGGTTTACCAGAATGCGACTATTGCGGGCGAATTTTCAAACGAAAGCAGAATATCGTTGCGCATATGATATCAGTGCATCTCCCCCAGAGCTTGGACATACGATGCGAGCAGTGCGATAGAACGTTCACGACTTTAAGGAACAAGAATAGACATACAAGACAGATACACAGCTCAGACATGAAGTATCTTGTTTGCGATATTTGCAAGAAGGTTTTTAAAGGGAAAACTGCCCTAATTGGTCACATTCAAGGACACGATAATAGTATAGAAACTGATACCTCAACTTGCAAACTATGCGGGAAGACTTATACGAATCCAAGAAATCTGAGACGACATACCGAAATGCATCACGGAGCTAAAACGGAATTCAAATGCGAGATGTGTCCTAAAAGTTACCCGTCCAACTATAGTTTGAGACGGCATACCCGCATGTGCCACGAAAACGAGAACACAGAAAGCCAATCTGAAGACGATACTCATATTACTTGTGGGATATGCTTTAAAGCCTTCGACAGTGAAAGCTATTTGAGACAGCATATGAAGATCAAACATTCGTTTGGTAACTTCTATAATTATTGCAAGATGTCTTTGCTAACTAAAGCGACGATCGACGTTGAGAAGGACGGTAACAAAAAACTGTGCTATGTGTGCTACGACAAGTTCTCGAAAGACAATCTTGAAGAGCATAAAAAGTCTTGCAAACCACCTGAAGGAACAAAATCCTGCGATAGTTGTGAAAAACTCTTCACAGACCCATCAAGTTTGGAGTTCCATAAACGTATATTCCATTCCCAATCCGTGGTCACTTCAACAATTCAAGATCCATCGTCATCCTATTACAATTGCGATCTGTGCAGCCGAGTTTATAACAGTGATCGTTCGTTAAAACATCATATGAAACTAAAGCATTCGACTGAGAAAGCGGTCAGTTGTCAAATGTGTGGAAAAGTGTGCAATAACAAATATTACTTGGAAAGTCACATGAAAATCGTTCACAGCCGTGGAGGTTGGACTTCTTGCACCCACTGCCGAAAACTTTTCAAATCTAAACGAAATTTACGTCGGCATATAGAGTTTACTCATTTGGGCCAAAGACGATACAAGTGCCTAGAGTGTGATACGCTGTTTAAAGAAAAACGTTCCCTACGTAAGCACGTAAGGACTAAACACCCAGATTCTTCAGTTTTTCCTTCTTGCCACGTTTGCGGGAAAAGATTTGAAAGCGCAAAATCTTGCAAAATACACCTGAAGCTAGTACATTCGTTGAAGCTAGACACGCACGCTTGCCATCTCTGCTCTGGTTCGTTCGTGTCGTACAAAGATTTGAGCGGTCACATCCAAAATGAACACTCTACTgataaagttataatgaaaTGCGAATTATGCAACCTTGTCTTTGAAGGAGAAGCGGCTTACGATAGACACAACGTTGTCAGCCATTTGAATATGCAGCAATCTAGTAGTAAAAGACCGTTGCCGCGATGTGTTCTTTGCATGAAAGATTTTAGCTCAACTAAAACGCTGAAAAGACATATCAAGAAGTTTCATAACGAATTCGATGCGGATGAACTAGCTGGTTATGGAGCTAGGAAGGCAAAAGTGACATTATTAGACTGCGATGATTGCGTCAGAAGATTCAACGATGACTTCTACAATACTCTCATTGAAAAGCAAACTAGTGATGCGGTAGTGTTTAAATGCGATCTCTGTGACCAGTCGTATACAAAAGTGGAATTCCTAATCCAAAGGCACAGGTTTAAAGTGAACGATGTTAATAGAATTGTGTTCAGTGAATTGTGTACCACCGAAATGGGGTACGTGAGCGGGGATGATTTGGAACCTGAGTCGACTACGAATCAGGATGTTATTGAGATAAATGACGAATTGGATTCGACTTAG
- Protein Sequence
- MAQLTDFVCDYCHRNFTRKYNLRTHIENCHLYSSSYCGVCDQTFSSPASLAQHQSKGHNRFGQGLPECDYCGRIFKRKQNIVAHMISVHLPQSLDIRCEQCDRTFTTLRNKNRHTRQIHSSDMKYLVCDICKKVFKGKTALIGHIQGHDNSIETDTSTCKLCGKTYTNPRNLRRHTEMHHGAKTEFKCEMCPKSYPSNYSLRRHTRMCHENENTESQSEDDTHITCGICFKAFDSESYLRQHMKIKHSFGNFYNYCKMSLLTKATIDVEKDGNKKLCYVCYDKFSKDNLEEHKKSCKPPEGTKSCDSCEKLFTDPSSLEFHKRIFHSQSVVTSTIQDPSSSYYNCDLCSRVYNSDRSLKHHMKLKHSTEKAVSCQMCGKVCNNKYYLESHMKIVHSRGGWTSCTHCRKLFKSKRNLRRHIEFTHLGQRRYKCLECDTLFKEKRSLRKHVRTKHPDSSVFPSCHVCGKRFESAKSCKIHLKLVHSLKLDTHACHLCSGSFVSYKDLSGHIQNEHSTDKVIMKCELCNLVFEGEAAYDRHNVVSHLNMQQSSSKRPLPRCVLCMKDFSSTKTLKRHIKKFHNEFDADELAGYGARKAKVTLLDCDDCVRRFNDDFYNTLIEKQTSDAVVFKCDLCDQSYTKVEFLIQRHRFKVNDVNRIVFSELCTTEMGYVSGDDLEPESTTNQDVIEINDELDST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00716291;
- 90% Identity
- iTF_00716291;
- 80% Identity
- iTF_00716291;