Basic Information

Gene Symbol
ct
Assembly
GCA_951802225.1
Location
OX637661.1:6467753-6496740[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 1.8e-23 82.8 0.0 2 70 211 280 210 287 0.94
2 3 4.5e-32 5.7e-28 97.2 0.0 4 77 612 686 610 688 0.96
3 3 5.1e-31 6.5e-27 93.9 0.0 3 75 814 887 812 891 0.95

Sequence Information

Coding Sequence
ATGCTATTTGCCGACCTTCGGTGGATATCAATTGTTCAACAATTGCTGGTGGGGTCGAGGATGGAGATCTCTCAACTGGTCGAAGACGTGAGCAGGCTCCAGGCTTCGCTGACAGCGTTGCAAGAAGCCCATGCCCAACAGTTGCAGAGACTTGAGGAGCGTTTAGACGAAAAGAAACAACACATAGCCAGGCTAGAAGCCCGGCTTGACACCCAGAGGGATTATGATGAGTTGAAGAGAGAAATCAGCATGCTGCGGTCGATGGATCTGTCAAGCGAAAGGCGCGAACTGGAGCGGAAACCGGAGCCTCTTCGATCCCCAGTCGCCCTGGTCCGCGAGGAGCGACTCTCAGCAACCCCCATCGACCGACCAGGTGGCGAGGAGTGGGCCGGTTCGCCGCTGAACAACAACACGACGCACCACAACAACAATGGGCCTGTACACGCGCCGCACCCCCCGCCGAGCCCATTCAGGTTCGAGGAGCACCGGCAGTACCGCTTCGCTGACGACATGGGCCCGCTGCCGCCCGGCGCTCTGGTCGGCAGGCTCGGCGACTCCCTCATACCAAAGGGTGATCCCATGGAAGCGAGGTTGCAGGAAATGCTTCGCTACAACATAGACAAATACGCGAGCAGCAACCTTGACACCCTGCACATAAGTCGGCGTGTCAGAGAGCTCCTGTCGGTTCACAACATCGGGCAGCGACTGTTCGCCAAATACGTCCTCGGTCTCAGCCAAGGGACGGTGTCAGAGCTGCTGTCCAAACCAAAACCCTGGGAGAAGTTGACTGAAAAAGGAAGAGACTCGTACAGGAAGATGCACGCGTGGGCCTGCGATGAAGCCTCCGTCATGCTGCTCAAGTCTTTAATACCCAAAAAAGTTGGAACTAAAGATGGTACAGGATCGAGCTTCGGTAGGCCTGACGGTGAGAACGATGACCGTCTAGCCCACATCCTGAGCGAGGCGTCACACATGATGAAGAACCCTGGAGGTCCCATCAACAACGACGACTCACGAAGCAATGAAGACTCCAGCTCGCCGCGGACCCAGTGCCCTTCACCTTTCTCCAACAAGGATTCAAGCCAGAACAGGCGGCTGAAGAAGTACGAAAACGATGACATTCCCCAAGAGAAAGTTGTACGAATTTACCAGGAGGAGCTCGCGAAAATCATGAGCAGACGGGTTGAGGACATGCGCCACAATAGAGACGGGTTCCCTGGTATGTTTCCACCCTTTTTCAGCGGTGGAATGCCGCCACATATGGAGCGGCCACCAGAAGACATCCGCATGGCCCTAGAGGCGTACCACCGGGAGCTGGCTAAGATCCAGCCTGGAGGGAACATGCCCAACCTGCACAACCTGCCAGGTATACCACCGTTCCCAAACCTCTTGGCTCTGCAGCAGCAGGCGCTACAAGCTCAAAGCCAACACATGAATGGTTCCGGCGCAGTTCAGGACCTCTCACTCCCTAAAGATAAGAACTCAAAAATAAATGGAATGACTGATAGTGATAAGCATAAAGAAATGGATGCAGAAGAGGCTATAAGGCATGCGGGAAGTGCGTTCAGCCTCGTCAGACCAAAGCTAGAGCCTGGACAGCAATCCACTGGATCGTCTGCCTCCAGTCCGCTGGGCAATTCAATACTACCGCCAGCGATTACGCCCAATGACGATTTTAGCACCTCAGCGGCTGCAAGCCCGCTTCAAAGGATGGCATCCATCACTAACAGTCTAATATCACAAACGCCAAATCCGCCATCACACGCGCCGCAACCAAGATCTATGAAGGCAGTTCTCCCACCAATCACGCAGCAGCAGTTCGATCTATTTAACAACTTGAACACTGAAGACATTGTCAGGAGGGTTAAGGAGTCTTTGAGTCAATACTCCATCAGCCAAAGACTTTTCGGAGAATCAGTTCTAGGCCTTTCCCAAGGATCTGTCAGCGACCTGCTAGCGAGGCCAAAGCCCTGGCATATGCTGACTCAAAAGGGACGAGAGCCGTTTATCAGGATGAAAATGTTCCTGGAAGATGACAACGCCGTACACAAGTTAGTTGCATCGCAGTACAAGATCGCGCCTGAGAAGTTGATGAGGACTGGCAATTACAGCGGAGCGCCTCcTCTTCCGCCAAACATGAACAAGCCGATGCCACCAACCCAGAAAATGATCTCAGACGCCACTTCCCTGCTCAGCAAGATGCAGCACGAGCAACTCCTGGGTCCAGGCCACCTCGGCCACCTGGGCCAGCCCTCGCCTCTACTGCTGACTCCTCCAGGCTTCCCGCCGCATCACGCCGTGACCCTCCCTCCCCAGCACCACGACAACAACAACAAGGAGAGGAAGCCTCCACCTCCGCCACCTCACCACCAACCTCCGATTATGAGAAGTCTTCACCAGCACATTTCACCAAGTGTTTACGAGATGGCTGCCCTTACCCAAGACTTAGATACGCAAACGATCACAACGAAAATTAAGGAAGCTCTCCTTGCCAATAACATAGGTCAGAAGATCTTTGGCGAAGCGGTACTGGGGCTTTCTCAAGGATCTGTAAGTGAGTTACTCTCAAAACCCAAACCATGGCACATGCTTAGCATCAAAGGCCGGGAGCCGTTTATTAGGATGCAGCTCTGGCTCAGCGATGCGCACAACATTGACCGTCTCCAAGCGCTAAAAAATGAGAGACGCGAAGCTAACAAAAGGCGACGGTCGAGTGGACCAGGACAAGACAACTCTTCGGATACATCTTCGAATGACACTTCAGAGTTTTACCACTCCAGCTCACCCGGCCCTACCTCTGGAGTACCTTCAGCCAAAAAACAAAGAGTCCTCTTCTCTGAAGAACAGAAGGAGGCATTGAGACTTGCCTTTGCATTAGACCCTTACCCCAACATGCCAACGATAGAATTTCTTGCAGCGGAGCTCGGTCTATCGAGTAGAACGATAACAAACTGGTTCCACAACCACAGAATGAGGCTAAAACAGCAGGCGCCGCACGGTCTACCGGCCGAGCCCCCTCCAAGAGACCAGTCTTCCGCTCCGTTCGACCCTGTGCAGTTCAGACTTCTTCTAAACCAGAGGCTTCTTGAGTTGCAGAAGGAAAGATTAGGTCTCGCTGGTGTACCGCTTCCATATCCACCTTACTTTGCGGCAAACTCAAACCTAGCAGCTTTGATTGGCCGTGGCTTGATCCCTCCAGAAGAAAAGAGGGATCAATCTGGCGGGTTAGACCTGTCCATGCCATTGAAGCGCGAGCCAGATGGTGATGACTTTGAGGATGAGGATGTAGAAAGCAATTTAGGTTCAGATGATTCACTTGATGACGGTGAGAAGCACGAGCCCAAAGCAGCATCGACGCCCGTTGGCGGCTCGAGTCGGAGAAAACCGGCTGCGCCGAAATGGGTAAACCCTGACTGGCAGGAAGATAAGCCACGGAACCCTGACGAGGTTATAATAAATGGTGTTTGTGTGATGAGGAGCGATGACTTTAGGCGGGAAGCTGAGGAGACTGTGAGGGTCGAGCCGTCGCCCGTGCCGCGGGAAGGAACGCCCCCGTCAGCCGCCGTGGCCATGTCCCCCCCACGGTCCGCTGAGGACGTCCTCCCCGAAGACAAAATAAAGTGCGAAACAGAGGACGATCGGTGGGAGTACTAG
Protein Sequence
MLFADLRWISIVQQLLVGSRMEISQLVEDVSRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDELKREISMLRSMDLSSERRELERKPEPLRSPVALVREERLSATPIDRPGGEEWAGSPLNNNTTHHNNNGPVHAPHPPPSPFRFEEHRQYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYASSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWEKLTEKGRDSYRKMHAWACDEASVMLLKSLIPKKVGTKDGTGSSFGRPDGENDDRLAHILSEASHMMKNPGGPINNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMSRRVEDMRHNRDGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNMPNLHNLPGIPPFPNLLALQQQALQAQSQHMNGSGAVQDLSLPKDKNSKINGMTDSDKHKEMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNSILPPAITPNDDFSTSAAASPLQRMASITNSLISQTPNPPSHAPQPRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPLPPNMNKPMPPTQKMISDATSLLSKMQHEQLLGPGHLGHLGQPSPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPPHHQPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPPRDQSSAPFDPVQFRLLLNQRLLELQKERLGLAGVPLPYPPYFAANSNLAALIGRGLIPPEEKRDQSGGLDLSMPLKREPDGDDFEDEDVESNLGSDDSLDDGEKHEPKAASTPVGGSSRRKPAAPKWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPREGTPPSAAVAMSPPRSAEDVLPEDKIKCETEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00715701;
80% Identity
iTF_00715701;