Basic Information

Gene Symbol
-
Assembly
GCA_951802225.1
Location
OX637641.1:12371836-12382329[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-16 3.5e-13 50.2 0.1 21 89 20 85 6 85 0.87
2 2 2.5 7.9e+03 -2.2 0.0 53 65 101 113 93 125 0.63

Sequence Information

Coding Sequence
ATGCATCTTGATAGTATAATTATGAACAAATATAATGCTAGCATTTTAAAAGTTCAACAAAGTGTATTAAGTATAGACAGTCTCGAAGTTGACATACCCAAGTTGTTCCATACTGTGCAAGCAAATGGTGGATTGAgtaatgttctagaaaaaaagaaatggaATAAGGTAGCCGAAGAAATGGGTTGGGAACCAAAACCCAGTTTGGCTAAACGACTTGATCAACTGTACGTCAAGTTTCTGGTTCCTTATGACACCTTAAGCAACCGTGAACGACTGGAAATAGTGACTCACGTAGAGATGGCCTGGAGCAAGCGGTACCAAAAGATGTTGTTCCGCGCGCGCAACCCGCTGCACAAGCAGCGGCGCGAGCTGTGCCTGTCCGCGTCGTCGGACGAGGAAGAGGAGGACGAGGTCGGCTGCGTGGGCGGCTTCGATGACTGCGTCGTGCGCGGCCGCTCCATGAACCTCGCCACCTTCAAGCGGGTTACTATTACAAACATTCCTCTTTTATTTATCTCAACCGTTTGA
Protein Sequence
MHLDSIIMNKYNASILKVQQSVLSIDSLEVDIPKLFHTVQANGGLSNVLEKKKWNKVAEEMGWEPKPSLAKRLDQLYVKFLVPYDTLSNRERLEIVTHVEMAWSKRYQKMLFRARNPLHKQRRELCLSASSDEEEEDEVGCVGGFDDCVVRGRSMNLATFKRVTITNIPLLFISTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-