Basic Information

Gene Symbol
pnr
Assembly
GCA_003667255.1
Location
RCWM01000093.1:512806-524423[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-18 6.1e-13 50.9 3.5 1 34 57 89 57 91 0.95

Sequence Information

Coding Sequence
ATGTCTCATCTGCTTCGACTGAGTCCGATCGTAATCTGCCAGCGAGCCGATGGTTGTGACATCCCGGCGATATGCGAGGCCTTCTCGCCTTTCCTTCGAACCATTGGGTTGAGGGGTTACAACTGTGGAGCAGACGGTTCGATGGAGTGCTTCAACGAGGGACGGGAGTGCGTGAACTGCGGAGCGATCAGCACCCCGCTGTGGCGGCGGGACGGTACCGGCCACTACCTCTGCAACGCCTGCGGCCTCTACCACAATATGAACGGCATGAACAGGCCTCTCGTCAGCAGCCCAGGCGACTGTCTGCTTCAAGAAGAGTCGTTTGACATGTTCCAATTGCGGAACCAGTACAACATCGCTATGGCGAAGAAATACAGTTGGAGAGCCAGTCTGCAATGCATGCGGCTTGTATTTCAAACACATGGAGTCAACAGGCCTCAAGCAATGAAGAAAGATAGCATTCAGacaagaaagcgaAAACCAAAAGGCAGTAAAACGGAAAGGGCAATGGCAAATCAGATTAAACTGGAACACAAtgGGCTGAACGACCTACGAGGAGCAGTGAGCCACGCCTCAGGAGGGCTTGGATACAACAATATGTTGAGCTATACCAGCCATAACATCCCTCCCTCTTACCTCGAAATGGGAGCCAAGCAGGAGCACAGTGTAGAGACACCACACATAGTCACCTCGCATAACACCAAACAAGAACGACCATCTGTCCTTGTATGA
Protein Sequence
MSHLLRLSPIVICQRADGCDIPAICEAFSPFLRTIGLRGYNCGADGSMECFNEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHNMNGMNRPLVSSPGDCLLQEESFDMFQLRNQYNIAMAKKYSWRASLQCMRLVFQTHGVNRPQAMKKDSIQTRKRKPKGSKTERAMANQIKLEHNGLNDLRGAVSHASGGLGYNNMLSYTSHNIPPSYLEMGAKQEHSVETPHIVTSHNTKQERPSVLV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-