Basic Information

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.3 1.2e+04 -0.8 0.0 34 44 13 23 8 25 0.84

2 5 2.2e-12 2.1e-08 36.8 0.8 1 45 31 77 31 78 0.93

3 5 1.7e-06 0.016 18.0 0.2 1 44 85 132 85 133 0.89

4 5 2.7e-13 2.7e-09 39.7 0.0 1 42 139 180 139 182 0.98

5 5 5e-14 4.9e-10 42.1 0.2 2 43 192 234 191 236 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.3	1.2e+04	-0.8	0.0	34	44	13	23	8	25	0.84
2	5	2.2e-12	2.1e-08	36.8	0.8	1	45	31	77	31	78	0.93
3	5	1.7e-06	0.016	18.0	0.2	1	44	85	132	85	133	0.89
4	5	2.7e-13	2.7e-09	39.7	0.0	1	42	139	180	139	182	0.98
5	5	5e-14	4.9e-10	42.1	0.2	2	43	192	234	191	236	0.97

Coding Sequence: ATGAAGATATCGTCTAAGGAATCTCTTGACATTCTTACTCCTGGTGAATGCTTAAGATattggaatttaattttatcccCTAAAGTCAATAGAGGAACATGGACAcagcaagaaaaaaaagaacttaaaaaactagcAATGCAATGTAATTACCAGAATTGGGATAAAATAGCTGAATTACTTAATACTAAAAGAACAGGTTACCAATGTTTTATTCAGTTCAAAAAGCACTTTGGAATGGTGGATTTTAACAGAGGTCGCTGGAGTAAAAAAGAAGATGTACAATTGTCCTATCTTGTTAGCATAAGTGAACAGGGAGGTGTGATTGGATGGGCTAAGGTATTATGCCATTTGGAAGATAGGACAATGGCCCAAGCATTAAATAGATGGTATCGCTTAGATCCAGGTTTAAAGAAAGGTAAATTTACAGATGAAGaagatattattttagtaaatgcTGTTGAACAGTTTGGTCTTGATTTTCAGAAAGTTGCTTCTGTATTTCCTAACAGATCAGCAATCCAATTACGAGAACGATATTTTGCCAAAAGGGACATGAAAGTTAATAAATGTGGTGAATGGTCTTTAGCTGAAGATAAGCTTCTTATGGATTTAATTGGAATTCATGGCGAAAGAAAATGGTCAAAGATAGCTGAGAACTTTCCTTCCAGAAATAGAATTCAAATCAGACATCGATATAAGtgtattaaattgaatttgCAAAAGGATCCAGGATTTAAGCTTGAAAACTTAAATAGGTTTAAGAGAAATACTCATGTTAATGCTAAAAACAAGCGAGATGAAGCAGCTATATCAAAAAGCACTGCAATTGATATCATCAGTAAAACTATCGAagaaggtaaaatattttacaataaaagaagaattttaaaaagaactGGAAGACTCAAAGAGAGAGGCTAA
Protein Sequence: MKISSKESLDILTPGECLRYWNLILSPKVNRGTWTQQEKKELKKLAMQCNYQNWDKIAELLNTKRTGYQCFIQFKKHFGMVDFNRGRWSKKEDVQLSYLVSISEQGGVIGWAKVLCHLEDRTMAQALNRWYRLDPGLKKGKFTDEEDIILVNAVEQFGLDFQKVASVFPNRSAIQLRERYFAKRDMKVNKCGEWSLAEDKLLMDLIGIHGERKWSKIAENFPSRNRIQIRHRYKCIKLNLQKDPGFKLENLNRFKRNTHVNAKNKRDEAAISKSTAIDIISKTIEEGKIFYNKRRILKRTGRLKERG*

Sequence clustering based on sequence similarity using MMseqs2