Eher072936.1
Basic Information
- Insect
- Euschistus heros
- Gene Symbol
- -
- Assembly
- GCA_003667255.1
- Location
- RCWM01000239.1:781767-796739[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.7 7.7e+03 -0.5 0.2 2 11 530 539 529 541 0.87 2 3 0.13 2.7e+02 4.1 0.1 28 41 542 556 540 559 0.79 3 3 8.8e-08 0.00018 23.9 0.0 1 29 569 597 569 598 0.98
Sequence Information
- Coding Sequence
- ATGGAAGCGCCAAACACAGAAGTGTTTTCCAATACTGAGGACAGAACAGTCGCAGAAGGTATACCACTAGAGGAGGAATATGATGATGTAATCTTGGAAGAGGACGTGGAAAGAGCTGTAGAGAGGCTAAAGATAGGCAAAGCAGCCGGTAGCGATGGTATTGCTCCAGAGTTAATTAAGTTCGGAGGGCCAGAATTGCAGAAGAAACATCTACAAGGCCTCtttcaaacagttttttttcaaaaactaatgCCGAAGGATTGGGAATATAACATCCTCATTCATATACACAAAAAAGGAAGCTCAAGTGACTGTAGGAATTACCGGCCTATATGTCTATCCCAGGTGCCATACAAGCTTTACACATCCATCCTTGAACAAAAGCTAAGAGGGTTTGTAGAGGAAAATCTTCAAGAGGAACAAGCAGCCTTCAGACCACACCCCCAAGCACAAGACCACATATTCTCTCTCAGGACCATAATTGAAAAGTCATGGGAAAGGGGGAAAAGTATATTTCTGGCTTTCCTGGATATAAAGGCAGCATTTGACTCAGTACCGGGACATGAGATATGGACAGCTCTAGCTGCTAAAAATGTCCCAACTGCACTTATAGATGATGTAAAATCCACTTACAACATCACAAAAGGCATTATAAGAATAAACGGAAGAGAATCCGAGGCCTTTGAAATGGCGAAGGAAAGCAAGAACAGTGGTTTTGTGAAATGGAATATGAGGACAATCCTTGCTCAAGCTATGGTGTACACAGATGACATTGTTCTCATACCAGATTCGGAAGAAAGCCTACAGCAAGCAGTCGTACAGATTTCCAACCGAATCAAAAAGGCAAACAGCATCTATTACCAACTATGCAACACGGCCTACCAGAAGACGTACCAGAGTCCCAGAGGCAGGCCTAGACTAACATGGACGGATCACATCTCCAGGCTGGGACAAAATAGAGGAAATAGCCTAAATGCCATGAAAGCGCTGGCAAGAGACTGGGAAGCATGGCGGACTTGGgATACTACTTTAAGTGCAAAGCGGATTCTATATGGTGCTGTCCTTCCTCAAACTCCCAATGGGACTCATAGTGATGTTGGGACTTCAACAGATGACCAGGATACTAAAGATATCATTGATACTGCTTTAGTTGTGGCATCACCACCACCTGAGCTGACGCAGAAAGTTACACCACAGGTGGTGGTGACAGAACATGGAAATGAGCTGAATGAATCGACAGCTCCTGTTACACTTGTTTCTCCAGTAGATATTCCTCAAGGAACAACTCATAGGGACATTGCAGTTGATGCTAGCGATCTTGCTGCTGGAGTGGAAGTTGATGAGGATGAAAATGTGAAGGTTAAATTTGAAACACTTAGGGCTATAGATCAGACAGAACAGATGGATATGGAACACATGCCTGATCGTGGAGTGCAAGCAGTTGGAGAAGATGGTATGCACACCATGATGATAACACCTGAACTGCTTGGCCTCATTCCTTCCTCCCAATCtgATGGGAGTGATGCAGGCAGTATCACCAAAGGCTCTACAAACAACACTATTAGTAGTGGAGGCAAATCTTGGAGGCAAGAAGACATGGAAGCTGCTCTTGAAGCCCTTAGtataccCTCCACCACTTTATGGCAGAGGGCTCACAgaCAAGGAATTGAAACTCCTAAAAAGGATGGTCCTTTGAAAACATGGACTGAAGATAATCTTAATGTAGCCCTTGATGCTCTCAGAACTGGTTCAATATCAGCCAACAAAGCTAGCAAGGCTTAtgATATACCACCTGTTCCTACCTATGAGCCTGACCTTGATACTTATGTCAGTtag
- Protein Sequence
- MEAPNTEVFSNTEDRTVAEGIPLEEEYDDVILEEDVERAVERLKIGKAAGSDGIAPELIKFGGPELQKKHLQGLFQTVFFQKLMPKDWEYNILIHIHKKGSSSDCRNYRPICLSQVPYKLYTSILEQKLRGFVEENLQEEQAAFRPHPQAQDHIFSLRTIIEKSWERGKSIFLAFLDIKAAFDSVPGHEIWTALAAKNVPTALIDDVKSTYNITKGIIRINGRESEAFEMAKESKNSGFVKWNMRTILAQAMVYTDDIVLIPDSEESLQQAVVQISNRIKKANSIYYQLCNTAYQKTYQSPRGRPRLTWTDHISRLGQNRGNSLNAMKALARDWEAWRTWDTTLSAKRILYGAVLPQTPNGTHSDVGTSTDDQDTKDIIDTALVVASPPPELTQKVTPQVVVTEHGNELNESTAPVTLVSPVDIPQGTTHRDIAVDASDLAAGVEVDEDENVKVKFETLRAIDQTEQMDMEHMPDRGVQAVGEDGMHTMMITPELLGLIPSSQSDGSDAGSITKGSTNNTISSGGKSWRQEDMEAALEALSIPSTTLWQRAHRQGIETPKKDGPLKTWTEDNLNVALDALRTGSISANKASKAYDIPPVPTYEPDLDTYVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -