Eher039244.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euschistus heros
Gene Symbol
pol
Assembly
GCA_003667255.1
Location
RCWM01000075.1:3502488-3524895[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-11 3.3e-08 35.8 0.0 2 41 874 914 873 917 0.91

Sequence Information

Coding Sequence
ATGTACGCCTCCGAATGTTGGACTCTCACAAAGAGCGATGAACTGAGCCATCTGAGATTTGAAAGAAGAGTTTTAAGAAAGATTTCTGGACCTATCCGTGATGGTGAAATCTGGAGACAGCGGACTAATCGGGAACTAGACCAGCTGTTCAATGAGACCGATGTAGTCCGGGTAATAAAGATAGGTAGATTCAGATGGGCTGGTCACGTCGCGAGGATGAGCGAAAAGGAGATTCCAAGGAAGATACTGGAGGAGAAGATCCATGGTAGGCGCCGAGTCGGCAGACCCAAATTGAGATGGCAGGATGGTGTTAGTGACAACGCAAGGTCCATGCTTGGAGTGAGAGACTGGAGAGCGGCAGCAAGAGATGGAGACAACTGGCTTAAAAtgttggaggaggccaggacccactCAAGGGTATATTATGAAAAACTTTACCATGACCAACCATGTATTAGTGTAGTAGTAGAAAAGATAGATAAATGGGACCCAGAAAAGTATGCCATTCTCTCAGAAGAAGTTAAAGCTACAGTAAAGAGCTTAAAAGACAAGATATCTGCTGGACTAGATGACATCACAGGGGAGATGACAAAAGCAGGTGGAGAAACCTTTAGGAATAACTCAGTGAAGATAATCTTTCCTAACTTTGTACAACGCACTCGCCTTGTTCCTAAACCTATCAAAGTCATTACTCCTCCGATACTGCCCGTAGTCGGAGTATCGGGGCTGTCTCGAATTAAATTTTCCGCTCCAACGTTCTTCGCCCAACTCGGGAGTGCAAAGCCTGAGCAAAGGGGGGAATCAATATGGCCGAGGAGACAAGGGCTGGTCGACCCGAGGAACCCAGATGGTGGAGGAACTTGCCGAAGAGTTAGGCCCCAGTTTTCCGCGGATCTGAACACGATGTGGAGGAGATCCCGAAATTTTCCGCTTCATTTCCTTCTGATTTGGTCCGCGGAGGACATACAGTACAGACCTACCTGGGTAGCAGGGGAGCATGGGGATTGCAGGCATTTAGGTGGCAGCCCCACCAGCAGACTAGGAACCAGTCTACTGGATGTTAGAGTCTACAGAAGTGCGAATGTAGACTCGGATCATTACCTCTCGATAGCTCACTTCAAAGAAAGGATCTCCCGACTAGGTTCTGAAAATACCCGAAAACACCATAAGAAAAACTTCAACACACGGAAGCTCATAGACCCAGATGTGTCAAACCGATACTCGATAACACTGGACCTCAACTTCCGGACATGTAATATGAAGGATAATGCAGTCGAAGAACAATGGCAAACTTTCTTCAGAGTAATAGAGGAAACATCAAATAATATCCTGGGACCAATCAAGAAGCAACCACGATCTCAGTGGTTTGATAGGGAATGTGAGGCTGCTGCAACTCAAAGGAAAAATGAAGCCTACAGAGCAATGACCCAACGAGAGACAAGGAGGAAGGTTGAAGAATATAGAAGACTCCGCAGAgagcagaaaaaaaagttacatcgGCAGAAAAAGAGAAACTACGAAAGGGAAGAACTCCAAAGGATCGAGGAAGTGCATGATGCCAAAGAAATTAGGGATTTTTTCTGTAAAGTAAATAAGTGGAGGAAACCATTCGCACCCCAGCTCCTTAAATATGGAGGAAGTGAGGCAGTGAAGGCTCTTCAGAATATCCTGCAGACTGTTTGGACGGAGGAGATAATGCCTTCTGGATGGAACAAATCTCTAATCCACCCAATACAGAAAAAGGGTAACCCCCTGAAGTGCCCAAACTACAGAGGTGTCTCCTTGCTACCCACTGGCTATAAACTCTTCTCTAACATCATATTCCAACGCCTATTACCATACGCTGAGAGAGTCTTGGGCCCATATCAAAGTGGTTTCAGACGTGGTAAATCCACCACTGACCCAATTTTCACACTTAGAACTATCCTGGAGAGAGGGCACGAATATAATATTAAGACTCATCACCTATTTATAGATTTCAAGTCAGCATATAACTGTATCAACAGGGAAAAGCTCTACCAAGCCATGGGTGAATTGCAGATACCCAAAAAGCTAATACGGCTAGTTAAACTGACAATGAAAACTGTCTTATGCTCAGTTCGTATAAGTGGAGAGCTTTCAGAAGAGTTCAACGCCTCAGGAGGAGTAAGGCAAGGAGATGCTCTCGCCAGCCTCCTCTTTAATATCGCCTTGGAGAAAGCAGTAAGGGACTCAGCCTATGCTGATGATATAGACATCGTAGGACGCTCCTTCCAGGTAGTCAAAGAAGCTTTCTTGGCACTGGTGGAATCAGCTGGAAGACTCGGGCTTAAAGTGAATgaatcaaaaactaaatatatggtgaCGGGAGATAAACCGAATCCAAATGAAAGCGTTTCATTTGGAAAGTATACTTTTGAAAAGACTGCAGACTTCGTATACCTAGGATCAATGGTGTCTCAGGATAATGATGGTGGAGCTGagCCCGGGGTGAAGGTGGTGTGGTGGGGTGGAGAGCCGGCCGAACTGGAGCCAGGGGAACCTTACGGCATTAGTGCCTCTGCCCCTTCTACCATATTCGGTATTCTGtgGTTAGCACTTCCTATCAGGAAAAAGAAGACTAATCGAAGGGAATGGAACCCTGATTCGATGAAAAATGCTATATATGCTGTTATGAGAGGTGAAATAAGCTATAAAAGAGCAGCAGACTCTTTTAAAGTGCCGCAATCTACATTAGAACGACGTGTAAAACAGACTAGAGAACATGGTGAAAAAACTGATGATGTGTTGACAATAGGCCCAAGTGagaaagaaaattttttaatcgattatTTGTCTAAAATGGAGGAAAAGCTGTTCGGGCTTACCTCTTATGATCTGAGACTACTTGTGTTTCATTCGACGGAGAAGCTGGGGAAAATCATACCTTTTCTGCCGAAAAAACAAGAAATCAGAGCCCACAGTGCGGCTAGAGCAGCAGCCTTTAACAAACACAATGTTACTAATTTCTTCACTTTGCTAACTCGCATTGTGGATACCCATAAGTTAACTGCTGACAGGATCTACAACTGCGACGAAACCGGCGTTACTGTTGTTCCCAAACATAGGTCAAAAGTACTCTCACTAAAGGGTAGAAAACAAGTTGGTGTGCTATCATATGCTGAAAGAGTAGGATGcagtcagatatttttttttatatggtttaAGAAGTTTGTGGAATGGAGCAGAGCTACGAAAGAGAAACCTGTCCTCTTGCTTTTGGACGGGCATTTCACCCACACTAAGAACATGGATGTAATTGATCTCGCAAGGGCAAAGGGGTCTTTTGCCACTTACCCCACTGAAAACCCCATCTAG
Protein Sequence
MYASECWTLTKSDELSHLRFERRVLRKISGPIRDGEIWRQRTNRELDQLFNETDVVRVIKIGRFRWAGHVARMSEKEIPRKILEEKIHGRRRVGRPKLRWQDGVSDNARSMLGVRDWRAAARDGDNWLKMLEEARTHSRVYYEKLYHDQPCISVVVEKIDKWDPEKYAILSEEVKATVKSLKDKISAGLDDITGEMTKAGGETFRNNSVKIIFPNFVQRTRLVPKPIKVITPPILPVVGVSGLSRIKFSAPTFFAQLGSAKPEQRGESIWPRRQGLVDPRNPDGGGTCRRVRPQFSADLNTMWRRSRNFPLHFLLIWSAEDIQYRPTWVAGEHGDCRHLGGSPTSRLGTSLLDVRVYRSANVDSDHYLSIAHFKERISRLGSENTRKHHKKNFNTRKLIDPDVSNRYSITLDLNFRTCNMKDNAVEEQWQTFFRVIEETSNNILGPIKKQPRSQWFDRECEAAATQRKNEAYRAMTQRETRRKVEEYRRLRREQKKKLHRQKKRNYEREELQRIEEVHDAKEIRDFFCKVNKWRKPFAPQLLKYGGSEAVKALQNILQTVWTEEIMPSGWNKSLIHPIQKKGNPLKCPNYRGVSLLPTGYKLFSNIIFQRLLPYAERVLGPYQSGFRRGKSTTDPIFTLRTILERGHEYNIKTHHLFIDFKSAYNCINREKLYQAMGELQIPKKLIRLVKLTMKTVLCSVRISGELSEEFNASGGVRQGDALASLLFNIALEKAVRDSAYADDIDIVGRSFQVVKEAFLALVESAGRLGLKVNESKTKYMVTGDKPNPNESVSFGKYTFEKTADFVYLGSMVSQDNDGGAEPGVKVVWWGGEPAELEPGEPYGISASAPSTIFGILWLALPIRKKKTNRREWNPDSMKNAIYAVMRGEISYKRAADSFKVPQSTLERRVKQTREHGEKTDDVLTIGPSEKENFLIDYLSKMEEKLFGLTSYDLRLLVFHSTEKLGKIIPFLPKKQEIRAHSAARAAAFNKHNVTNFFTLLTRIVDTHKLTADRIYNCDETGVTVVPKHRSKVLSLKGRKQVGVLSYAERVGCSQIFFFIWFKKFVEWSRATKEKPVLLLLDGHFTHTKNMDVIDLARAKGSFATYPTENPI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-