Eher072934.1
Basic Information
- Insect
- Euschistus heros
- Gene Symbol
- -
- Assembly
- GCA_003667255.1
- Location
- RCWM01000239.1:769674-776067[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.3 6.1e+02 3.0 0.0 28 39 11 22 10 25 0.88 2 3 1.3e-16 2.6e-13 52.2 0.0 2 45 40 84 39 84 0.98 3 3 3.7e-17 7.6e-14 53.9 0.0 2 42 92 133 91 135 0.96
Sequence Information
- Coding Sequence
- ATGTACCAATTTAATTACCACAAGCTCAGAATCCCGAGCAGCACTCTTTACAAAATAGCCCGCAGAGAAGGAATTCGTTTAGCTGCACCTTTCAATGCTGCACCAACTTCGTGGGCTCCTGAAGATCTGGAGCGTGCTCTAGAGTCTATCAGATCTGGACAGTCAACGGTACAGAGGGCAGCTGCAGAGTATGGTATTCCCTCTGGCACCCTATATGGTAGGTGTAAAAGGGAAGGCATTGAGCTGTCACGGGCTAACCCTACCCCATGGTCAGAAGCTGCAATGAACCAGGCGTTGGATGCTGTTAGaaTTGGGCAAATGAGTATAAACCAAGCTGCAATTCATTTTAACCTACCGTATTCCTCATTGTACGGAAGGTTTAAGCGAGGTAAGTATGATGGTAGTGGAGGGATTGAAGAGACGAATGGGCCTATAGAGGCTACAGGCGCAGAAGCAACACCGCCTGCAGCTGACCTGTTGCCAACAGCCCAAAGCCAGCCACAGATAATGCTCGTCCAATATCAGCAGCCAATCCACATGTATCAACCAACCTGA
- Protein Sequence
- MYQFNYHKLRIPSSTLYKIARREGIRLAAPFNAAPTSWAPEDLERALESIRSGQSTVQRAAAEYGIPSGTLYGRCKREGIELSRANPTPWSEAAMNQALDAVRIGQMSINQAAIHFNLPYSSLYGRFKRGKYDGSGGIEETNGPIEATGAEATPPAADLLPTAQSQPQIMLVQYQQPIHMYQPT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -