Basic Information

Gene Symbol
kn
Assembly
GCA_003667255.1
Location
RCWM01000295.1:180123-206807[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.6e-21 4.8e-16 61.0 0.0 209 252 126 171 112 188 0.86
2 3 4.2e-97 2.7e-92 312.8 0.0 240 391 250 401 233 406 0.93
3 3 1.1e-08 0.00073 20.8 13.5 405 512 394 505 394 523 0.67

Sequence Information

Coding Sequence
ATGCTCCCCCACCGTGTTCCCATGGGGACTGCCTCCTCCCCGGGGGGTTCGATTCCTAACCTCTCCGGTCCGCAGCTTACGTCACGGCTGCCCTCTACTCCGTCTATTAGATGCATCTACGCCTCTTCCTTACACGGCTTTAGTGTTTTCCGACAAGATGGCGGTCTAGGAGGTTCTCAATGGACGACTCGCGAGTTCGGTCAAGAGGGCGAAGAGTGTATCTTCTCTACGCTGGGCGCTGTATCTTCTCTCACGAGTTTCTCTGTTATTGTTCATACAATAGGGCGTCATTTGTCCCGTGAGGGTGTTGTCTGCCGCGAGAGGGGTCCAAAAATCGAGTTAGCTCCTCCGACAAAGACTTCCCGTGTCTTCCCGCCGGTTGTGATCTCGACGATGGTTTCTGTCGAGGGTCCACTCCTCGCCATCTCGGACAACATGTTCGTCCATAACAACTCCAAGCACGGCAGGAGGGCGAAAAGGATAGACCCTTCCGAAGGCGAATCagCAGCGCCGCGCACGTTTGCGGCTGATCAGCTGATTAACCTCAAGCCGCCTCCTTGCATATCGTATCGCTGGGGAACTAAGGCGAGAATTTCAAGTGTTGATAAGGAGCAATACAAAGGCAGAAGACATCCTCAAGACGACAAAACAAAACCTTATCCGATCTCACCCCTCCTACAACAGCTTTGTATTATGATAATAGCGCTTAGCCAACAAAGAGAAAATCCTAGCAACTTCAAAACTTTGCGGTTACGCCTGTACCCACCTTTACCTGTTGCAACACCGTGCATCAAAGCTATATCGCCAAGCGAAGGCTGGACAAGCGGTGGTTCGACAGTCATTATCATTGGAGACAACTTCTTCGATGGCCTTCAAGTTGTCTTCGGCACGATGCTTGTCTGGAGTGAGCTGATAACCTCCCATGCGATAAGGGTGCAAACACCGCCAAGGCATATTCCGGGGGTTGTGGAGGTAACCTTGTCCTACAAGAGTAAGCAGTTCTGTAAAGGTGCTCCTGGACGTTTCGTCTATGTTTccTTGAATGAGCCTACGATTGACTACGGATTTCAACGCTTACAGAAGTTGATACCGAGGCATCCCGGTGACCCGGAAAAACTCCCGAAggaaataatattgaaaaggGCAGCAGACTTGGCAGAGGCGCTGTACACGATGCAGCCAAGGAACCAGCAACTCGCAGCTCCGAGATCTCCTACAAACAACAACAGCACTGCCACCTTCAACTCCTACACCGGCCAACTGGCTGTGACGGTCCATGAGAACAACGGTCAGTGGACGGAAGAAGAGTACACGAGGGGAGGAGCTGGAAGTGTTTCGCCAAGAGGATACGGCTCCAGTACGAGTACACCTCACTCCAGCAACGGCGGGTACAACAACTCGACGCCGACCTACCCGACGTCTTCGCAGGCTACGTCCACAACGCCTGTCATCTTCAACTCATCCGCACCTAGAGTTGGAAGTCTTGTCTCCTCACCTTTCACTGGAATGAACCCTTTCGCTCTTCCGACATGTAATTCACAGAGTTACAGTCCCCTTGTATCAACACCAAAATGA
Protein Sequence
MLPHRVPMGTASSPGGSIPNLSGPQLTSRLPSTPSIRCIYASSLHGFSVFRQDGGLGGSQWTTREFGQEGEECIFSTLGAVSSLTSFSVIVHTIGRHLSREGVVCRERGPKIELAPPTKTSRVFPPVVISTMVSVEGPLLAISDNMFVHNNSKHGRRAKRIDPSEGESAAPRTFAADQLINLKPPPCISYRWGTKARISSVDKEQYKGRRHPQDDKTKPYPISPLLQQLCIMIIALSQQRENPSNFKTLRLRLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMQPRNQQLAAPRSPTNNNSTATFNSYTGQLAVTVHENNGQWTEEEYTRGGAGSVSPRGYGSSTSTPHSSNGGYNNSTPTYPTSSQATSTTPVIFNSSAPRVGSLVSSPFTGMNPFALPTCNSQSYSPLVSTPK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-