Ecal001753.1
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- nfxl1
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010000002.1:827519-830263[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 2e+04 -3.2 1.1 15 19 123 127 122 127 0.81 2 18 0.34 6.5e+03 -1.6 0.3 4 10 158 164 157 164 0.87 3 18 1.2e-08 0.00023 22.2 16.7 1 19 172 189 172 189 0.99 4 18 2.7e-07 0.0052 17.8 17.7 3 19 227 243 215 243 0.83 5 18 0.33 6.3e+03 -1.6 0.3 5 10 267 272 267 274 0.92 6 18 0.00013 2.4 9.3 10.0 1 19 278 297 278 297 0.91 7 18 6.4e-05 1.2 10.3 8.5 1 18 333 350 333 351 0.97 8 18 0.0068 1.3e+02 3.8 7.6 1 12 385 396 385 396 0.94 9 18 1.2 2.3e+04 -3.4 1.7 6 10 406 410 406 410 0.97 10 18 8.7e-08 0.0017 19.4 14.6 1 19 416 434 416 434 0.93 11 18 9.1e-05 1.8 9.8 9.7 9 19 482 492 480 492 0.90 12 18 0.00015 2.9 9.0 6.6 1 12 502 512 502 512 0.95 13 18 0.86 1.6e+04 -2.9 5.8 14 18 543 547 543 548 0.89 14 18 1.6 3.1e+04 -3.8 0.6 9 12 565 568 565 568 0.77 15 18 0.00012 2.4 9.3 7.0 1 12 584 595 578 595 0.91 16 18 0.47 9.1e+03 -2.1 0.9 6 10 610 614 609 614 0.93 17 18 0.008 1.5e+02 3.6 15.3 3 19 623 639 622 639 0.91 18 18 9e-06 0.17 13.0 11.6 1 16 684 698 684 704 0.89
Sequence Information
- Coding Sequence
- ATGAGGAAATTTCGAAGAGCTCAAGCCCAAAATCAAGCTTCTATTGTAAAACACTTAGAAGCGAATGCTATAGAATCTTCTAGCAGtgatgaagaaaatgaagaagtaTTTGAATCAGCAgtggaaaaagttttatctaatTATCAATGCGAGGGTGgagatgtaaataaaatagtgtCATACTTGACGGAAACTTTTCAATCTGGTGGTGCGGTTTGTCTTATATGTATATCATCTGTAAAGAAGACAGATCCaatatggAGCTGTTCCGAgtgttatacatttttacatttacctTGCATTCAACACTGGGTGAGAGACAGTTTAAGTTACAAACATGAAAAAGGAATCACTCCTTTATGGGCTTGtCCAAAATGCAGAACGGAATACCAGGAAGATCAGATACCAAGAAAATACCTTTGCTTTTGTGGAAAAACAGAAGATCCTCCCTATCAGCCATGGACCATATCTCATTCCTGTGGAAGTATGTgcggaaaatttttacaaccaAAATGTGGCCACAAGTGCATGCTTCTGTGTCATCCTGGACCTTGTCCTCCTTGTCCAAAGATGGTTTCAGTCCCTTGTTTTTGTGGGAAACAAGCACCACAACCTAAGAGGTGTAATGCCAAAGAATGGAGTTGTGGTGAGATATGTGGCAAAAAGTATCAAAGTTGCAATCACAaatgtgtacaaaaatgtCACTCTGGTCCTTGTCCACCTTGctcagaaaaaattctaacagCTTGCAATTGCgaaaataaatctgaattacGCAAATGCAATGAATCTATTTGGAAATGTGACAAAGTATGTGGCCGATCTTTCTCCTGCAATGTTCATGTTTGTAATGAAGTTTGTCATAAGCAAGGTGATTGCAATGCATGTCCATTAGAGCGTAACAGAACATGCCCATGtggtaaaaagaaatatgctATATCTTGCAAGCAACCGCAAGTACCAACATGTGGAGATACATGTGGCAAACTATTAGATTGTGGAGCTCATTACTGCAATATGAGATGTCATACAGATCGTTGTGGACAATGTCTCGAGGTGGTAACAAAAACTTGCAGATGCGAAAGCTTCAGTAAAGAAACTGCCTGTGTCAAAGAATTTCACTGCACCAAAAAGTGTACGCAAATGAGGCTGTGTGGCAGACacttatgcaataaaaaatgttgtgactgtttattaaaaaacaattttaatgtgTGTGAAAAAGTATGTGATAATACTTTGAATTGTCGAAAACATAAGTGTTCAGCTCCTTGTCACAGTGGACCTTGTTATCCGTGCCCTCGTACGGTAGTTATTCAATGCCGCTGTGGCAATAGTAAAATCACTGTACCATGTggtacagttaaaaaaattaaacctcCACATTGCAACAAAATGTGCAAAATTCCACCAATTTGTCATCATCCTAAAAGAGAATCGCATAAATGCCATCAGGGTCCATGTCCACCATGCCGTAAAGTTTGTGGCTTAACATATAAGAAATGTGGTCATACTTGCCCAGCACTTTGTCACACTAAAGTATGGACAAAAGTAAAACCAAATGGAGTGACCAAACCCATAGGACCATGGGAGAACCAAAAAGAAAGATGggaatatcaaaattttccatGCCCTCCTTGTGAAGTTTCTGTCATGGTTACCTGTCTTGGAGGACACGAAACCCGTCCATGGCCTTGCCACAAGGCTATTTCAAGTTCATGCCTTAGAGAATGTGGTCAATTATTATCTTGCACAAATCATAATTGTGAAAGACTTTGTCACAAATTACAATCGTCTAGTGATGACGACGAAGATAAATGTATAGACTGTGAGAAAGTGTGTATTTTTCCAAGACCAAAGGGATGCACACATGTTTGTCCAAAGTCTTGTCATCCAGCACCATGCAATCCATGTAAGAATCTTGTAAAAGTTTCCTGTCACTGTGGTATTAACACACTTTATATTCGTTGTGCTGAACTTACATCTGCTAATACTGAAAAACGCAATGAGATTTTACAATGTGGAAACCAGTGTCCGCGaaattatcCGTGTGGGCACAGATGTGTTGATAACTGCCATCCAGGACCATGCCAAAATACAGAGGCTTGCAACAAAAAGGTCAAggtattttgtaaatgtaaacgAATAAAGAAGGATTTTTCGTGCATTTTAGTACGTTCAGGAAAAGCTGTTGTTGCATGTGATGAAATCTgtcagaaaaagaaagaagagttGGATCGTCTTCGAGAAATTGAGCaagagaaaaaacgaaaagaggAAGAACTCAAGAATcagaaagaaattgaaatgtttgaaaagaaatttaaaccaAAACGAAGAGGAAAGGATCGTcatcaaaataaagaagagtCGCGCAATAAAGGCAGCTCCTGCAAATGGATATGGATCATTGCATTACTCATTGTTGGAATTTCTGTTGCAGTAATGCTGACATTCCACACCAATGgtgaaatattatacattgGATAA
- Protein Sequence
- MRKFRRAQAQNQASIVKHLEANAIESSSSDEENEEVFESAVEKVLSNYQCEGGDVNKIVSYLTETFQSGGAVCLICISSVKKTDPIWSCSECYTFLHLPCIQHWVRDSLSYKHEKGITPLWACPKCRTEYQEDQIPRKYLCFCGKTEDPPYQPWTISHSCGSMCGKFLQPKCGHKCMLLCHPGPCPPCPKMVSVPCFCGKQAPQPKRCNAKEWSCGEICGKKYQSCNHKCVQKCHSGPCPPCSEKILTACNCENKSELRKCNESIWKCDKVCGRSFSCNVHVCNEVCHKQGDCNACPLERNRTCPCGKKKYAISCKQPQVPTCGDTCGKLLDCGAHYCNMRCHTDRCGQCLEVVTKTCRCESFSKETACVKEFHCTKKCTQMRLCGRHLCNKKCCDCLLKNNFNVCEKVCDNTLNCRKHKCSAPCHSGPCYPCPRTVVIQCRCGNSKITVPCGTVKKIKPPHCNKMCKIPPICHHPKRESHKCHQGPCPPCRKVCGLTYKKCGHTCPALCHTKVWTKVKPNGVTKPIGPWENQKERWEYQNFPCPPCEVSVMVTCLGGHETRPWPCHKAISSSCLRECGQLLSCTNHNCERLCHKLQSSSDDDEDKCIDCEKVCIFPRPKGCTHVCPKSCHPAPCNPCKNLVKVSCHCGINTLYIRCAELTSANTEKRNEILQCGNQCPRNYPCGHRCVDNCHPGPCQNTEACNKKVKVFCKCKRIKKDFSCILVRSGKAVVACDEICQKKKEELDRLREIEQEKKRKEEELKNQKEIEMFEKKFKPKRRGKDRHQNKEESRNKGSSCKWIWIIALLIVGISVAVMLTFHTNGEILYIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470178;
- 90% Identity
- iTF_00713387; iTF_01381770;
- 80% Identity
- -