Ecal017387.2
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- pnr
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010009751.1:1015-3157[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-06 0.018 15.7 4.0 1 27 110 135 110 143 0.94 2 2 3.8e-18 1.6e-14 54.2 7.0 1 35 170 203 170 204 0.97
Sequence Information
- Coding Sequence
- ATGCTATTGAAGAGCGACCCCACGCTGTCCTCGTCGTCGCTCATTCGGTCGGGCGCCCTGGCGTACGAGCAGCCGCAGTCGCCGTCGCAGGTGAGCATGTACCAGACGTACCAGATCACCAAGCCCGGCGAGTACTACAACCATTCGCCGCCCTTCGAGCCCTACGGGCCGAATTACGCGAGCATGCCGATCACGACCGGCGACGGCGGCAGCCTGATATTCACGACGAACAACCCCTACCTGTCCGCCGGCTCCAACACCTCGGGCTGGCTCACGGCCAACTCCGAGGAGGCGTACGAGGCGCAGATTTCCGGCTCCGGCAAGGAGTGCGTCCACTGCTGCGCCAACGACCCCAGCAACTGGCGCAAGGACCCCGACGGGCACCTCCACTGCATCGCCTGCGGCAACCCCTACTTCAAGCCCAACGGCATGTCCAGGCCACCGGCGCAACGCGTCAAGCCCAAGGCCACTGCACCGCCGACTGGAGGAAGAAGGATGGGCGTAAGGTGTGCAAATTGCTCAACCAACACAACTACCTTGTGGCGGCGAAACAACAATGGAGAACCAGTGTGCAACGCCTGCGGACTTTATTACAAACTTCACCAGGTAACTACTacaattaatgaatatattttcttcCAAAATACGTGA
- Protein Sequence
- MLLKSDPTLSSSSLIRSGALAYEQPQSPSQVSMYQTYQITKPGEYYNHSPPFEPYGPNYASMPITTGDGGSLIFTTNNPYLSAGSNTSGWLTANSEEAYEAQISGSGKECVHCCANDPSNWRKDPDGHLHCIACGNPYFKPNGMSRPPAQRVKPKATAPPTGGRRMGVRCANCSTNTTTLWRRNNNGEPVCNACGLYYKLHQVTTTINEYIFFQNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -