Ecal008666.2
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- lola
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010000048.1:16133460-16148912[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-10 7.1e-07 29.9 0.1 9 40 414 446 411 451 0.91
Sequence Information
- Coding Sequence
- ATGGAGGACGACCAGCAGTTCTGCCTTAAGTGGAACAACCACCAGTCCacattaatacaaaatttcgaCACACTACTCGTGTCAGGCACGTTAGTGGACTGCACGCTGGCGGCGGAGGGGAAGTACCTAAAGGCCCACAAAGTCGTCCTCTCCGCTTGCAGTCCGTACTTTGAGggTCTCTTGAGTGAACACTACGATAAACACCCAGTCTTCATACTCAaggatgtaaaatttaaagaactgAAGGCCATGATGGACTACATGTACAGGGGGGAAGTAAACGTCTCCCAGGACCAGCTAACGGCCCTGTTGAAGGCGGCCGAGTCCCTACAAATAAAAGGCCTGTCGGATAGCAGAACGGGCGGCACCGGCGGCGCCACGACCGGCAAGGCCGAGACGAGGACAGCGAAAACGGCGAGCTCGACGGCCGCCTCGTCGTCGGTCGACATTCCACACGCGTCTTCCGGTCTTAACACAGAGAAGAACAGCAAAGTTCCTAGGCAAAGTCTACAGCAGGTCTCCGTTAGTGATCTGCCCGAGGACTCGGCCAGCCCTCAACTCAGGGGTCTCTCCTCAAGGGAAGGATCACAAAGCCCGACAAGGAAAAGAAAGAGGTTGCGAAGGCGAAGTCTCGGAAACGAAGACTCCAGTAACATCTTGGAGAATCATGAAGCATCGAACTCGAGCGACGTTAATCTGAGCACATCGACGCTCGGAGTAGTCGCGCCAGTCGCAGACGACAGCACACATGCCGAACCCGCAGATTCGATCAGCAGGTCGGCGCTAATGCAACAGTTAACGAAACCCGCCGACGAGATGCTTCAGatTCCCATCGAAAAACCAGAGCCTAGTGAAGAAATGTTACAGCCAAAGTCTGAGTACCTGGACGACCAGGAAAGCGTGGAAGATCTTACCAACCTCGACGATGACATGAATGACCTCACAGAAATGCAAGAAGACAGTAGAGCGGGCCCCAGTGGTCATGATCCTTCCCAACATCCAGGTGGGTGGTCGGTGGGTCGCGGTACAAAGCTAACTTCTTCGCGGTCGTCTCGTTCTCATTCCTCTGCGAGGCCCCCGCCTGACGTGGACGTCGGCGGCTGGGGAGCCTTGCATTTCCTCGGGTACGGCAAGACAAATAATCCAGCGCGGCGCGCCGATGTCGACGTGAGCTCGTTGCTCCGCTCGCTCGCAGGCAAGCAGGGTAGAAAGTACAGTTTAGAATCGGTTAGGTTGTCGCTGGAGGCAATACTCCAGGGAGGCGTTAGTACAACTCAAGCTTCGGAAATGTATGGGATCAATCGGTCgactttacaattttacttaaaaaagttgaacGTCGTGAGGCGCCGTTGGCGAAAGCCACCGGTGCCCGCCTCCTCTACCACAGGCATCGCGTCGTGGCACATGGCAGGCGACAGAAGCAATGCCAGCGTCGTCGCAGGTGGACCGCCCGGAGGTCAGGATGAAGTTTTCCTCGCTGCCCATGAAGCCGCCCAAGCACAACGCGACTCGCAAGCGTCGAGCGGCAGCAACGGCGGTAACAGCGACATCGGCGTCAATCCAATGGCCGACTATCGGAGGCTGTGCTGCCCAAGCTGCGGTCGCAGCTACAAGTACCGCGGCGGTTTGCTCAGGCACGTCGCCGAGTGCCTGACCGAGGCCGAGATGCTCGAGGCCCGGCAGCAACCCAACGCTGTTGCGAAGGACGTGCGCGTGCTGTTCAACCTCTGGAAGCCATGA
- Protein Sequence
- MEDDQQFCLKWNNHQSTLIQNFDTLLVSGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNVSQDQLTALLKAAESLQIKGLSDSRTGGTGGATTGKAETRTAKTASSTAASSSVDIPHASSGLNTEKNSKVPRQSLQQVSVSDLPEDSASPQLRGLSSREGSQSPTRKRKRLRRRSLGNEDSSNILENHEASNSSDVNLSTSTLGVVAPVADDSTHAEPADSISRSALMQQLTKPADEMLQIPIEKPEPSEEMLQPKSEYLDDQESVEDLTNLDDDMNDLTEMQEDSRAGPSGHDPSQHPGGWSVGRGTKLTSSRSSRSHSSARPPPDVDVGGWGALHFLGYGKTNNPARRADVDVSSLLRSLAGKQGRKYSLESVRLSLEAILQGGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRKPPVPASSTTGIASWHMAGDRSNASVVAGGPPGGQDEVFLAAHEAAQAQRDSQASSGSNGGNSDIGVNPMADYRRLCCPSCGRSYKYRGGLLRHVAECLTEAEMLEARQQPNAVAKDVRVLFNLWKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00714498;
- 90% Identity
- iTF_00714498;
- 80% Identity
- iTF_00714498;