Ecal034698.1
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- -
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010062569.1:6881-8501[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-11 6.8e-08 33.2 0.0 3 38 14 49 12 53 0.91 2 2 2.7 5.2e+03 -1.7 0.0 32 44 124 137 122 138 0.87
Sequence Information
- Coding Sequence
- atgattaaaactaagaaaaagaaaggatcGTGGAGTATAGAGAACATGAAGATTGCAATTAAATTGgtgttagaaaaaaaactttctcaaAGAGAAGCATCTGAAAAATTTGGATTACCAAGGTCTACTTTGAGAGATCGCTTAAAAGCTATCAATGCTGGTGAAGAAGTGGATTTTATTCCTAAATTAGGAAGATTTAGTCTAACATTTAACACAGAATTAGAACAGCAGTTAACTACATACATTAAAGATCTCGACAGTAAACTGATGCCCTTTAACAGGAAAgagtttctaaaatttgtttacgatTTGGCAGAATATTTGAATCTTCCCCATCAATTTAATAAGGATAAAAAAACAGCagaagaaacattttattacagtttcaTGAAGCGACATCCGGATTTGTCTTTAAGGAGTCCTGAATCAATCAGTATTGAAAAAGCAGtagaattcaataaaaatcatgtCAAATATTTCTTCAGCAGATATTTTGCTCTTCTAAAAAGCCATTCAAGTCATAAAGAtcttaatgtattattattcgCTGAAGAACATCATATACATATACTTGGACTTCCTCCACATgcaaaacataaaatacaaCCGTTAGATTGTGATATTATGAAACTATTTCAAACATCCTATAAAAGTGCATGCAAAAACTGGATGCAAAAGCACGACCCAAGGCAATTATCCCTTAAAGATGTTACAAgttTAGCTGCAAAAGCTTATTACTCTATTTGTAATATGGAATTAGTAAAGGATGCTTTCAAAGACACAGGTATCTGGCCTCCTGATTGTAATGTATTTGAAGGTATAGAATTTATCTCTTTGAAAGAATTAGATAATTCAGAAAACTTAAATGAAGCAAAAGAATCACCGTTTTCTCCAACTTCTGATCTACTaatggaattaaataaaaattctgttgATCCAGACAACACCTTTCAtgATTAA
- Protein Sequence
- MIKTKKKKGSWSIENMKIAIKLVLEKKLSQREASEKFGLPRSTLRDRLKAINAGEEVDFIPKLGRFSLTFNTELEQQLTTYIKDLDSKLMPFNRKEFLKFVYDLAEYLNLPHQFNKDKKTAEETFYYSFMKRHPDLSLRSPESISIEKAVEFNKNHVKYFFSRYFALLKSHSSHKDLNVLLFAEEHHIHILGLPPHAKHKIQPLDCDIMKLFQTSYKSACKNWMQKHDPRQLSLKDVTSLAAKAYYSICNMELVKDAFKDTGIWPPDCNVFEGIEFISLKELDNSENLNEAKESPFSPTSDLLMELNKNSVDPDNTFHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -