Basic Information

Gene Symbol
ct
Assembly
GCA_035586675.1
Location
JAXIUT010000009.1:11370450-11383135[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-27 1.1e-23 84.1 0.0 2 72 390 461 389 466 0.95
2 3 5.6e-32 3.6e-28 98.5 0.0 3 77 829 904 827 906 0.96
3 3 1.4e-30 9.2e-27 93.9 0.0 3 76 1069 1143 1068 1146 0.96

Sequence Information

Coding Sequence
ATGGAGGAGGTATCGAGGCTGCAGATGAACCTGCAACGCCTGCAAGAGACGAGCGCCCAGGCGACGGCGCGTCTCGAGGAGGAGCTCGAGGCGCGCAGGCAGCACATCAGCCGGCTGGAGAGCAAGCTGGACCGACAGAAGGACTACGAGGAGCTGAAGCGCGAGATCAGCGTCCTGAGGTCCGTGGACCTGTCGCAGATACCGACCGGCGAGCCCGGCAAGAGCCTGGAGCAGGTGCTCATGGAGCGCTCCAAGGCGCTCCAGCAGGCCGAGACCCTCAAGCCGCCCAGCACACCCGACACACTTGGTGGACTATCGTCACCCCTGCAACGGGCCGCGACCGCCTCGCCCCACGGTGCGGTGATAGCGCCGCCATCGTCCTCCCTCGTGTCCTCACAGTCGTCGCTCCCGAGCCGCTCCACCCCCACGCCCTCCTCGGCCGCCACCTCGACGAGCTCCTCACTCCTCTTCCCCCCGCCCCTTCAAAACGTCGAGACCTTCGGCTCCTTCCTCGGCGAGGAAATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCGATCATGAgtcagcagcagcaacagcagcaacagcagcagcaacagccgACGTCCCAAGCCTCCACAGTCGGCCTCCATCCGACCGGGGCACCGGGCAGCGCTCTAAACCACCTCCCGTCGCCGACAGATCCGATCTCGAGCTCGAGCACGCCCGCCAAGGCCAGCACGCCGCTCGGCAGCGCGGCCGCCCTCGACTCCGCGGAGAAGGCCACGACGCCGGTCTCGGGGCACGAGACCCCGGCCCCGCCCACGCCCTCCTCCACGACGACGCTCACCTCGCCGCCGATACTGCAGGCCCCGGCCGACGTGGCGCTGCCCGTCAACGGCCCGGTCGTCACGCCCGCGCCCAAGAGCCCCCCGGAGGAGTCCGCCTGccacaacaacaacaacaacagccACCACCTGGCCAACAACAACATCGGCGGCCTCGGCGTCCTCGACAGCCTCAAGAGCCCGTTCCGCTTCGACGAGCGCTCGCACCCCTTCCGCTTCGGCGACGAGTTCGGCCCGGTGATGGCCGGCCGCCTCGGCGAGTCGCTCATACCCAAGGGCGACCCGATGGAGGCGCGCCTCCAGGACATGCTGCGCTACAACATGGACAAGTACGCCTCGCAGAACCTCGACACGCTGCACATCGCGAGGCGGGTGCGCGAGCTGCTCTCGATACACAACATCGGCCAGCGGCTCTTCGCCAAGTACGTGCTCGGCCTGAGCCAGGGCACCGTCAGCGAGCTCCTGAGCAAGCCCAAGCCCTGGGACAAGCTCACGGAGAAGGGCCGCGACAGTTACAGAAAAATGCACGGCTGGGCCTGCGACGACAACGCGGTCTTGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGCATGCCGgcgttcgcgcgcggcccgcagGAGGGTGGCGTCGGCGCAGCCGCCGGTCCCGGGGGCAACGGCAACGGGGCCGGTAGCGGTTCCGCGGCCGGCACCGCCCCCCAGGACCTGAGCGAGGAGCGCATGGCGCAGATACTGTCCGACGCCGGGCACATGCAGCTGAGCCGGCAGAGCGAGCCCGACACCTCGAACGACACCGACAGCAAGAGCCCGAGTCGGCTGAACTGCCCCAGCCCCTTCGGCAAGGACCGCAGCCTCGACAGCCAGAACCGCCGGCTCAAGAAGTACGAGAACGACGACATTTCGCAGGAGAAAGTGGCGCGGATCTACCACGAGGAGCTGGCGAAGATCACCGGGAGGCGCGTGGACGACCTCCGGGGTCCCAGAGACTTCCCCGCCAGCGCGATGTTCCCGCACTTTTTCAGCGGGCAGAACCTGCAGGGCATGGAGCGCACCCAGGAGGAGATCCGCATGGCCCTGGACGCGTACCACCGCGAGCTCCAGAAGCTGAACGTGGCGCAGGGCCTGCCCTACCCGCCGCAGATCTCGGGCCTGCTGGCCCTGCAGCAGCACGCCATCCAGCAGCACCACCTGTCGACGAacggcggcgccgccgccggagccaactccgcggcggcggcgatcgcCGCCGCCCAGGACCTCAGCCTCGGCAACATCCTCAGGAACAAGATGATCAACGGCGTGTCCGAGGAGGAGAAGGAGAAGATGGAGGAGGCGATGAGGCACGCCGGCAGCGCGTTCTCCCTGGTGAAGCCGAAGCAGGAGCCGACGGGCGCCCAGTCGACGCCCGGCGGCTCCAGCGCCAGCTCGCCCCTCGGCAACTCCATCCTGCCGGCGGCGATGGCGCCCGCCGAGGAGTTCACCGGCACCGCCGCGGCCAGCCCCCTCCAGAGGATGGCCTCCATCACCAACAGTCTTATCAGCCAACCGTCCACGCCGACCCACCACTCGGCCAACCAGCGGCCGCTCAAGGCCGTGCTCCCGCCCATCACGCAGCAGCAGTTCGACATCTACAACAACCTCAACACGGAGGACATCGTGAAGAAGGTGAAGGAGCAGCTCTCGCAGTACTCGATCTCGCAGCGTCTGTTCGGCGAATCCGTCCTGGGCCTGTCCCAGGGCTCCGTATCGGATCTCCTGGCCCGGCCCAAGCCCTGGCACATGTTGACGCAGAAGGGCCGCGAGCCCTTCATCAGAATGAAGATGTTCCTGGAGGACGACAACGCCGTGCACAAACTGGTGGCCAGCCAGTACAAGATTGCACCGGAAAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGCGGAACGCCAATGAAACCGATGCTCCCGGCTAAACTGGCCCAGGAGCAGATGCAGAGCATGGCCAAGGCCCAGGCAGCGGCGCAAGTCGCCGCAcaggcggccgcggcggctcaGCACCAGGAGAGCCAAATGCAGCTCGGACCGCCCCAGCAGAGTCCGCAACTGCCGACGCACGTGCAGCCGTCGCCCATGATGCTGACGCCTCCGGGACCCATCCTCCCCCACGGCCAGATCAACATGCAAGAACTCCAGaagaagcagcagcagcaccagcagcagcagcagcagcagcagcaccaagGCGTCCAGATGACCCTGCACTCGCCGCACCACCAGCTGGCCCCGTCGCCCCTGCGCGGCCTGCATCCCCACATCCCGCAGAGCGTCTACGAGGCCGCGGCCTTCACCCAGGACCTCGACACGCAGACCCTCACGACCAAGATCAAGGAGGCGCTGCTGGCCAACAACATTGGCCAGAAGATCTTCGGCGAGTCGGTCCTCGGGCTCTCCCAGGGCTCCGTGAGCGAGCTCCTCAGCAAGCCCAAGCCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTCTGGCTGGCCGACCCCCACAACGTCGACCGGCTGCAGGCCCTGAAGAACGAGCGGCGCGAGGCCAACAAGAAGCGGCGCAGCAGCGGCCCCGGCCACGACAACAGCTCCGACACCTCCAGCAACGACACGGCCGAGTTCTACCACGCCGCCTCCCCCGGCCCCGGCCCCACCTCCGCCAAGAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCCTTCGCCCTCGACCCCTACCCGAACGTCGCGACCATCGAGTTCCTCGCCAGCGAGCTCGGCCTCTCGTCGCGGACGATCACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGCCGCACGGCCAGCCGGAGCCGCAGTCGCCGCGCGAGCCCGGCCAGCCCTTCGACCCCGTGCAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATCCAGAAGGAGCGGCTCGGCCTCGGCAGCGTGCCCCTCGCCTACCCGCCCTACTTCAACCCCAACCTCGCCGCCCTCGTCGGCAGCGCCCTCAAGGAGCAGTGCTCCGGCCTCGACCTCTCGATGGGCTCGCTGAAGCGCGAGCCCAACCAGGAGTTCGAGGACGAGGACGCCGAGGACGCGATGAGCAACCTCGGCAGCGAGGACTCCGAGGGCTCGGCCGGCAGCATCAAGCGCGAGCCCACGGAGGCGCCCGCCCCGGCCAACACCTCGAGGTCGAACCGGCGGAAGCCCGCCGCGCCCCAGTGGGTCAACCCCGAGTGGCAGGAGCCCGCGCGGACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAGACCGACGACTACGGCGTGAAGCGCGAGGCCGAGGAGACGGTGCGGGTCGAGCCGACGCCCGTCCAGGACCGCTACGAGGAGGACGCGCAGAGCGACGTGTCCTCGGTGTCGGCGGCCAACGCCCCGGAGCGCGAGAGCCCCTCGCCCAGCCCCAAGTCCGCGCAGAACAGCCCGGCGACGTCGCCCAGGCCGCCCTCGGCCCCGCAGCACGGGCCGCAGCTCGGGCCCCAGGCCGCCGAGGAGAGCCCGAAGGACATCGTGAAGCACGAGCCCGAGGAGACGTGGGACTACTAG
Protein Sequence
MEEVSRLQMNLQRLQETSAQATARLEEELEARRQHISRLESKLDRQKDYEELKREISVLRSVDLSQIPTGEPGKSLEQVLMERSKALQQAETLKPPSTPDTLGGLSSPLQRAATASPHGAVIAPPSSSLVSSQSSLPSRSTPTPSSAATSTSSSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQPTSQASTVGLHPTGAPGSALNHLPSPTDPISSSSTPAKASTPLGSAAALDSAEKATTPVSGHETPAPPTPSSTTTLTSPPILQAPADVALPVNGPVVTPAPKSPPEESACHNNNNNSHHLANNNIGGLGVLDSLKSPFRFDERSHPFRFGDEFGPVMAGRLGESLIPKGDPMEARLQDMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKEYVSGKEQGMPAFARGPQEGGVGAAAGPGGNGNGAGSGSAAGTAPQDLSEERMAQILSDAGHMQLSRQSEPDTSNDTDSKSPSRLNCPSPFGKDRSLDSQNRRLKKYENDDISQEKVARIYHEELAKITGRRVDDLRGPRDFPASAMFPHFFSGQNLQGMERTQEEIRMALDAYHRELQKLNVAQGLPYPPQISGLLALQQHAIQQHHLSTNGGAAAGANSAAAAIAAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPTGAQSTPGGSSASSPLGNSILPAAMAPAEEFTGTAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDIYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMLPAKLAQEQMQSMAKAQAAAQVAAQAAAAAQHQESQMQLGPPQQSPQLPTHVQPSPMMLTPPGPILPHGQINMQELQKKQQQHQQQQQQQQHQGVQMTLHSPHHQLAPSPLRGLHPHIPQSVYEAAAFTQDLDTQTLTTKIKEALLANNIGQKIFGESVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADPHNVDRLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQPPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLDIQKERLGLGSVPLAYPPYFNPNLAALVGSALKEQCSGLDLSMGSLKREPNQEFEDEDAEDAMSNLGSEDSEGSAGSIKREPTEAPAPANTSRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSVSAANAPERESPSPSPKSAQNSPATSPRPPSAPQHGPQLGPQAAEESPKDIVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309398;
90% Identity
iTF_00714260;
80% Identity
iTF_00714260;