Basic Information

Gene Symbol
pnr
Assembly
GCA_900475205.1
Location
UXGB01000806.1:6579-31170[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.46 1.9e+03 -0.8 0.1 21 26 76 81 73 84 0.81
2 2 9.5e-17 4.1e-13 49.4 4.3 1 35 475 508 475 509 0.98

Sequence Information

Coding Sequence
ATGTCGTCGGAAAGCGGCGAGGAGGCCGCTGGCAGCAGCCCGCAGCAGAGGCAAGGACCGCCGAACGTAGTGCCGGCCAAGTTCTACAAACTGTGCCGCCTTTGTCTAGCCGATGACGGCGTCAGGCTCTCCATCTTCGAGACTCCGCACCAGCAAATCAGATTCGACGAAAAGATATCCAGCTGTCTCTCCATCAAGGTGGAAAGTGGGGACTTGTTGCCGCAGAGCATTTGCAACAGATGCGTCTACAAGCTGGACGTGCTGCACAACTTTCGGGAGGTGTCTCGCAAATCTGACGTCTTACTCAAAAAGTACCTCCAATATGCCGAACAGGTTTCCAGAGAAGAGGCGgaaaaggaAAAAAATGCTATGCCGAACGGCGACTTGAGCGGTTTCCACACGTACCTCGGCCTCATGAGAACgacgccgtcgtcgtcgccgcccgCCGATGGTCCGAACTCGCCGGTCTCCATAAGCCAGCACCAGATCCCGGAGTCCACGCGCATCCACCACCTGGAGCAGTCGGCGCTGCACGCGCTGCGCGCGGCGGACGGCCAGCAGCAGGGCGAGACGCTGGCCGAGGACGACGCGATCTCGAACGACTCGGACCCGGACCGGCTGGAGATCGAGGACCGCGACGAGGAGGAGCCGGCCGAGAGCGAGGAGGCCGAGGAGAACGGCAGCTACGACGCGAGCGCGCAGCCGGTCAAGCGCTCGAAGGTGGACAGCGGCATCGGCGAGGCGAACAGGCccggcagcagcagcccgaACACCGCCAACGTCAGCCCGATCAACAGGATGGACACGCCCGAGAGCAACTGCTCCGACACCCCCGTCGTCGACCAGGGCACCAAGCTCTGGCAGGCCCTCGCTAACAATCGTGACTTGGAGATAACGCGGACGAACGGCGACAAGCCGAACAAGGTGAACGGATTCACCACCAGCGACACGGCGATAAATATGATCCGCAACTTCATCAATGTGACGGCGATGCAGCGGGGAGCGGAGGTGGTGGCAGCCGCCACTGGAGCCGCGGGTGTCGGCGTGCCTCAGGTGTGCTTCTACCGGGACACCCAAGGCGCGCCGAGCCTCGCACCCCCATCCGCTGACGGACCTGTGCACGGAAACCGAACCAGCATCGCCGGACGCCTCGAACATCAGAACACATCGATGGATAGCAACCCGTCGAGTCCGGCGAATGGTCGCAAGGAGACGAAGGGCCGGCGGAAGCAGAGCTACCCGAGCAAAGCCGCCAGTCCCGCTGACTATTCACAGAAGGAATCCGTGGAAGACCAAGCTCAAGACTTTACTGCATGGCCCAATACAAATAAGAGCAACGTAGAGCTGGATCAGCAGGGAATGATGGTGGGCGGTAACGGCGCGAACAACGTGAACAATGCGGCCAAGAAGGTGGACATGTCGTGCACGAACTGCGGTACAATGACGACGACGATCTGGAGGAGAAACATGAAGGGCGAGATGGTCTGCAACGCTTGCGGCCTCTACTTCAAGCTGCACGGGGTGAACCGGCCGGTGACCATGCGACGCGACACCATACACACCCGACGGCGTAGGCCCAAAGGCGAGAAGACCAGTAGGCATCGAAAGAAGGGTGACAACGGCAACGTAACCATACAGCCCCAGCAGCAAGTTGTTAGCAGCCATTCGCAGCCACAGAAACCAGAACAATCAGAAGCAATGGACCCAGACAGCGTGGACATGATGGAGGCGTTACGCCGACAACTCCAGCCACACCTGATCAGGGCTGCGATGGCGACGCCTTCACCACTAGGATACGGTATTCCGACGATTCACGGATCACCCGTGGCTGCGGCGCCTCACAACTTCTCCGTTCCCCTTAATGCCTTCATGATGCATCAAGTGAAGCAAGAGCAACCGGACTACGAAGAGATGGATGAGGTCGGCGACGAGGAGAATATGTCGGATGTGCCGTTGAACTTGGTCGCCACGTCGTTGGCCGAGGAGGCTCACTGA
Protein Sequence
MSSESGEEAAGSSPQQRQGPPNVVPAKFYKLCRLCLADDGVRLSIFETPHQQIRFDEKISSCLSIKVESGDLLPQSICNRCVYKLDVLHNFREVSRKSDVLLKKYLQYAEQVSREEAEKEKNAMPNGDLSGFHTYLGLMRTTPSSSPPADGPNSPVSISQHQIPESTRIHHLEQSALHALRAADGQQQGETLAEDDAISNDSDPDRLEIEDRDEEEPAESEEAEENGSYDASAQPVKRSKVDSGIGEANRPGSSSPNTANVSPINRMDTPESNCSDTPVVDQGTKLWQALANNRDLEITRTNGDKPNKVNGFTTSDTAINMIRNFINVTAMQRGAEVVAAATGAAGVGVPQVCFYRDTQGAPSLAPPSADGPVHGNRTSIAGRLEHQNTSMDSNPSSPANGRKETKGRRKQSYPSKAASPADYSQKESVEDQAQDFTAWPNTNKSNVELDQQGMMVGGNGANNVNNAAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYFKLHGVNRPVTMRRDTIHTRRRRPKGEKTSRHRKKGDNGNVTIQPQQQVVSSHSQPQKPEQSEAMDPDSVDMMEALRRQLQPHLIRAAMATPSPLGYGIPTIHGSPVAAAPHNFSVPLNAFMMHQVKQEQPDYEEMDEVGDEENMSDVPLNLVATSLAEEAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-