Ebru020343.1
Basic Information
- Insect
- Eurytoma brunniventris
- Gene Symbol
- ZNF341
- Assembly
- GCA_900475205.1
- Location
- UXGB01001504.1:22270-26274[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.04 4.7 8.6 3.5 1 23 45 67 45 67 0.98 2 13 0.0001 0.012 16.8 5.0 1 23 217 239 217 239 0.99 3 13 2.6e-07 3.1e-05 24.9 0.4 1 23 245 267 245 267 0.98 4 13 0.0017 0.2 12.9 1.2 1 23 292 315 292 315 0.96 5 13 0.01 1.2 10.4 0.5 1 23 321 345 321 345 0.97 6 13 7.2e-05 0.0084 17.2 1.3 1 23 350 372 350 372 0.98 7 13 0.0082 0.96 10.7 4.0 1 23 384 408 384 408 0.90 8 13 0.00013 0.015 16.4 2.2 1 23 410 432 410 432 0.98 9 13 6.8e-06 0.0008 20.4 0.2 1 23 438 460 438 460 0.96 10 13 8.6e-06 0.001 20.1 1.5 1 23 466 488 466 488 0.96 11 13 0.0017 0.2 12.9 1.2 2 23 495 521 494 521 0.89 12 13 0.14 16 6.9 6.1 1 23 528 551 528 551 0.93 13 13 0.00061 0.072 14.3 2.7 1 19 553 571 553 574 0.96
Sequence Information
- Coding Sequence
- ATGGCGCACTCAATATTCGATGCACTGTCCGGTGTATCTCTGGATGGCTCTACGGTCCAGTCTTTACTGGAGTCCCAGACTTTGTTAAGTGAAGTGGAACAATCGGctTTGGATCAAGATGAAGAAGATATATTTCAGTGCGGCAAGTGTAAGAGTCAGTTTACGTCCTTGCACTTGTTTGTAATTCACAAGAGAGAGCATACTAAAGTTCAAGAGCAGTCCGTGGACTTAAATCAGTATTTAGCGAATGACGACAGTCATATCGTTCAGAATGAGCACGATGAGACACAGTACAATTTCGATCAGACACATCAGCTTTGTGAGTCAATTATTTTGGAGGAAAATGATATACTTTTTAGTATGGACCAAGAAGGTGCTAGCTACTTAACTTCcgattctaattttaatgtcccgataattttaaatacggATGGATTAGAATCATTTGCCAATACTCCTTTACATGAAACGGAAGATGATCCTATGAACGAGGAAGTAAGTGAAATGCACATTTTGGATAATGATATTAATCAGAATTTTGAAGACAGTGATCTACATAAACAATTAGCTATTGATGTTCCTGAAGTGAAGACACCTGTTGAAAATTCTGAAGAAGAGAATAAGTCTGGCCAAACACAAAATCTaaagTACAAGTGCAGTTACTGCAACAAgcaatttaccaaaaaattctACTGGCAGCAACACGAACGTTCCCACACGGGAGAGAAGCCATATCAGTGCGTAGTCTGCGGTCGTCCGTTCGCTCAGAAGTCCAATGTAAAGAAGCACATGTCATCGCACAAAGTGTGGCCCGGCACTGCCATTCACTCCCTGCCCCCCGAGGCACCAACGGACGGCAGCATCGAGCGCTCCTACCACTGTCAATTCTGCAAGGAGATCTTTGATTCGTACAAAGCGCTGAAGGCCCACCTGATAGTCTCCCACCTGACGCTGAAGGTGTACAAGTGCGTGCAGCACGGCTGCGGCCTGATGTTCGCCGAGCTCGAGGACTTCCTCGAGCACACGCGCAGCCACAAACGCTCCGAGTACCGCTGCCACGTCTGCGCCGAGACCTTCAGCACCCTCTCCGATCTCGGCCTCCATCAGTACACGCACTCCGAGCAGAAACAAAAGCCCAATGAAAAGTACTTCTGTTGTTCGGTGTGTAAGTCGTCGTTCTCGAACCTCGAGGCGCTGCAGCACCACACGGAGACGACGACGCACAACTACGTGTGCCCGCACTGCGGCAAGAGCTTCCTCATCGAAAGATTTCTCAGGCGCCACCTGAAGACCCACGCGTCGTCGGCGCGCTTCGCCTGCGAGGACTGCGGCAAAGCTTTCAAGACCGAGCAGTACCTTGCCAATCACAAGCTCATACACAGCGAGGAGACACCTTATCTTTGTCCTCACTGCCCGGCGAGATTCAAGCGGAAGGACCGATTGAGCCGGCACATGCTGATCCACGACTTGACGAAGCGGTTGAAGTGTCCGTTCCGCGTCCACCTCGGCTGCATGCGCGAGTTCTCGCGGCCGGACAAGCTCAAGCGTCACCTGCTCACCCACAGCAACATGAAGCGCAACTTCAGCTGCGGCTCCTGCAACCGGCACTTCCACCGCGCCCAGGCCCTCAAGCATCACGAACTCAACAAGCACTGCTTCAAGTGCGACGTCTGCTCCCACGCGTTCAAAACGAAGGATCAGTTGATAAACCACAATTGCGATCAGTCGGCCGAGGTGAAGAAGCACTCGAGCTCCCAGTTGCCCAGGAAAGCCTCCGGTTCGTTCAAAACGAGGAGGCCGACGCCCAAGCGGCAAGTATCCTCTAAGAGCACAACGGTTACCTCGACCGTTTCAAATGCTTCTGATAAAGAGAAGGAGAAGAGTAGAGCTGACGATACtcaaaaaaagaattcccctgaaactttaaaatctaCTCACGAGGATGCTTTCGGTGTAAAAATGGAAAGCTTAGATTTCGATTTGAGCAATGGAAATACATTAACTTCGGAAATTTTGAGAAACgaataa
- Protein Sequence
- MAHSIFDALSGVSLDGSTVQSLLESQTLLSEVEQSALDQDEEDIFQCGKCKSQFTSLHLFVIHKREHTKVQEQSVDLNQYLANDDSHIVQNEHDETQYNFDQTHQLCESIILEENDILFSMDQEGASYLTSDSNFNVPIILNTDGLESFANTPLHETEDDPMNEEVSEMHILDNDINQNFEDSDLHKQLAIDVPEVKTPVENSEEENKSGQTQNLKYKCSYCNKQFTKKFYWQQHERSHTGEKPYQCVVCGRPFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPTDGSIERSYHCQFCKEIFDSYKALKAHLIVSHLTLKVYKCVQHGCGLMFAELEDFLEHTRSHKRSEYRCHVCAETFSTLSDLGLHQYTHSEQKQKPNEKYFCCSVCKSSFSNLEALQHHTETTTHNYVCPHCGKSFLIERFLRRHLKTHASSARFACEDCGKAFKTEQYLANHKLIHSEETPYLCPHCPARFKRKDRLSRHMLIHDLTKRLKCPFRVHLGCMREFSRPDKLKRHLLTHSNMKRNFSCGSCNRHFHRAQALKHHELNKHCFKCDVCSHAFKTKDQLINHNCDQSAEVKKHSSSQLPRKASGSFKTRRPTPKRQVSSKSTTVTSTVSNASDKEKEKSRADDTQKKNSPETLKSTHEDAFGVKMESLDFDLSNGNTLTSEILRNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691382;
- 90% Identity
- iTF_00714599;
- 80% Identity
- -