Basic Information

Gene Symbol
CDC5L
Assembly
GCA_900475205.1
Location
UXGB01001674.1:13730-17931[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-16 2e-13 50.9 1.5 2 46 9 54 8 54 0.97
2 2 4e-12 7.1e-09 36.4 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCACGTATTATGATAAAGGGCGGTGTTTGGAGAAACACTGAGgATGAGATATTGAAGGCGGCGGTGATGAAATATGGAAAAAACCAGTGGTCGCGTATAGCCTCCTTATTGCACAGAAAGTCAGCGAAGCAGTGCAAAGCTCGATGGTTTGAATGGCTTGATCCAAGCATCAAAAAGACAGAATGGAGCAGAGAGGAGGACGAAAAACTGTTACATTTGGCAAAGCTCATGCCAACGCAATGGAGAACAATTGCTCCGATTATCGGACGAACAGCAGCCCAATGCTTAGAACGATACGAATATTTGCTaGACCAAgcacaaaaaaaggaagagggaGATGAAAGTGTAGATGATCCTAGAAAATTGAAACCTGGAGAGATTGATCCAAATCCTGAAACAAAACCTGCAAGACCAGATCCTAAAGACATGGATGAAGATGaacTGGAAATGCTGTCTGAAGCAAGAGCTAGGTTAGCTAATACGCAAGGTAAGAAGGCAAAGAGAAAGGCTCGTGAAAAGCAATTGGAGGAGGCACGAAGGCTTGCAGCTCTACAAAAAAGAAGGGAATTGAGAGCTGCAGGGATACAAGttgcacaaaaaaataaacggaaaagaggaattaattataatacagAGATTCCATTTGAAAAGAAACCAGCACCAGGTTTCTATGATACGTCAACTGAGGAAATCGATCCTCTTTCGGCTGATTTCTCAGCATTGAGgcaacaaaatcaaaatcaattgACTAGacaagaaagagaagaaatagaaagaaaaaaggataaacaaaagttaaagcaacgaaaagaaaatgatatcccaacaaatatattaaatcaaGAGCCAGTTAAAAAGCGAAGTAAACTTGTTTTGCCAGAGCCGCAAATCTCTGACAAAGAATTGCAGCAAGTTGTTAAATTGGGTCGTGCATCAGAggcTGCAAAAGAAATTGCCCTTGAAGGAGGAGTCCGCAGTTCAGATATATTGCTGGCTGATTATTCTTTGACTCCCAATGCAGCAGCAACTCCACGAACACCAGCAGTGGTTGACAGAGTTATGCAGGAAGCTCAGAATGTGATGGCATTGACGCACGTTGATACTCCATTGAAgggtGGCATGAATACACCTCTTCAAAATGCTGATTTTAGTACGTCAGTACCAACGGCAAATGCTGTAGCCACCCCGAATACAGTGCTTGCCACACCATTCAGATCGCAGAGGAGTGACGCGTCACCAGCTCCATTTAGTACTCCAGGTTCTGTAAGAGGTCCAAATGGTACACCATCACAGACTCCCCTTCGCGACAAGTTAACTATCAATCCAGAGGAGGCAATGGAAGCTACTGAGACGCCCATTATTCGCAAACaggTGAAAGATCAATTGAAAACAGGCTGGAGTTCTTTGCCGACACCGAAAAATGATTACGAAATAGTAGTTCCTGAAGAGGAAGAAGCACCCGATGAAGAAGAGGCAGGTGCTTCAGGAAGTGATGTTGTTGAGGACCAAGCTGATATTGATGCAAGGAAACAGCAGGAGCTCATAGAACAAcAAAAAAGAGATCTGGCCAAAAGATCTCAAGTGATACAAAGATCTCTTCCACGACCTACTGAAGTTAACATGAATATTTTGCGCCCATCTAATGAAGTTTCACTTACGGATTTGCAAAAggctgaagaattaataaaaagggaGATGATTTCAATGATGCACTTCGATGCTTTGAAGAATCCAGTTAATCCTAATCACAAGCGAGCTCAGTCATTTATTAATCAAGCTGAGAATTACTTAGAGTCTCACCCTTACGACGAATTTTCTACAGACGAATATGAAGAAGCCAAGGAAgttctgaaaaaagaaatagcgGTTGTAAAAGAAGGAATGGCTCACGGACATCTCAGTTTAGATAATTATTGTACAGTATGGGAAGAGTGTTTGTCACAGGTTTTGTACCTGGAACCTCAAAAGAGATATACTAGGGCTACATTAGCTTCAAAGAAAGATAGAATTGAAGCATGTGAACGTAAGTTGGAAGAAAATAGAATGCACATGACGGGTGAAGCAAAAAAAGCTGCAAAGATGgaaaagaaactaaaagtATTATTAGGCGGTTATCAgaatCGAGCTCAAGTACtagtaaaacaattaaatgatttgAACGATCAAATCGAACAAGCTCGACTGGAGCTATCTACATTCAAATTCTTGCAAGCGCAGGAAGAGGCTGCCATTCCCAAACGAATAGACGCACTGGTAGAAGATGTAAATCGGCAGAAAGAGAGGGAGCAGGCATTGCAGATGCGATTTGCGGAACTGCAAGAGAAGTTGCAGGAAGCTCAACAAAGGCGCACCTCCTAA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDESVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIQVAQKNKRKRGINYNTEIPFEKKPAPGFYDTSTEEIDPLSADFSALRQQNQNQLTRQEREEIERKKDKQKLKQRKENDIPTNILNQEPVKKRSKLVLPEPQISDKELQQVVKLGRASEAAKEIALEGGVRSSDILLADYSLTPNAAATPRTPAVVDRVMQEAQNVMALTHVDTPLKGGMNTPLQNADFSTSVPTANAVATPNTVLATPFRSQRSDASPAPFSTPGSVRGPNGTPSQTPLRDKLTINPEEAMEATETPIIRKQVKDQLKTGWSSLPTPKNDYEIVVPEEEEAPDEEEAGASGSDVVEDQADIDARKQQELIEQQKRDLAKRSQVIQRSLPRPTEVNMNILRPSNEVSLTDLQKAEELIKREMISMMHFDALKNPVNPNHKRAQSFINQAENYLESHPYDEFSTDEYEEAKEVLKKEIAVVKEGMAHGHLSLDNYCTVWEECLSQVLYLEPQKRYTRATLASKKDRIEACERKLEENRMHMTGEAKKAAKMEKKLKVLLGGYQNRAQVLVKQLNDLNDQIEQARLELSTFKFLQAQEEAAIPKRIDALVEDVNRQKEREQALQMRFAELQEKLQEAQQRRTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309433;
90% Identity
iTF_00714307;
80% Identity
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