Ebru023859.1
Basic Information
- Insect
- Eurytoma brunniventris
- Gene Symbol
- bab1
- Assembly
- GCA_900475205.1
- Location
- UXGB01000196.1:106415-108307[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-13 2.7e-09 37.3 0.1 1 38 325 363 325 367 0.93
Sequence Information
- Coding Sequence
- ATGAGTGATCCGGGTCAGCAACAATACTGTTTGCGGTGGAACAACCACAGTACCAATTTTGTAACAGTATTTGAAGAGCTTTTCAGAACAGAGGCTTTCACTGATGTTACTTTATCTGCTTATGATGGATTTGCACTTAGATGCCATAAAATGGTACTGGCTGCCTGTTCGACATATTTCCAGGAtctctttattaaaagtacaacTTGTGAAAACCCTGTTGTCATTCTCAATGACGTCAATCACGTTGAAATTAAAGCAATTCTGGATTATATGTACAGAGGTGAAGTCAATGTAGCTCAAGATCAACTTGCCAGCTTACTAAGTACTGCCAGATGTTTGAGgATCAAAGGACTAGTAGATGATACTGACCCACCCCAAGAAAACCACAAAGTGGAAGAAGAGGAGATCCTGACACCACCGCCATCTAACTCAACAAGTACGAGCAGTGCAGCTCATAGCTCTGGATATTTGACCCCCCCTCCCAATCCTAATACAACTTTTATCCCTTATGGAAACATTCCAGTAGAGCAAAACCATAATCACCTGGCATCGTGGTCTGCTTTCTCAGGTCAACCTCCTCTGCAACAAGACAATGTTCAAGGTCCAAAGAGCCAGGGCACCTCAACCCACAACAGCCGGTCAACAAGTCGCAGGAAACTTAGTGGCTCCTACGAGAGGTCATCCGAATCTTCTCCTCTCACCAAAAAGAAATACTCCAGCATAGTGCACCAGTCGCGTGACTCACAGATTTTGAGGAACGTACTTCATCACGGCCAACAGGATTTGCACATCCCTGATAATGTGCACCAAAAAAGCAACGGCTCGCTTCACGACAGGAGGAACAGCGAGGAGCACATCGAAACTCCTATGGATGATCATGAAGAAAAACACGTACCGCTAGCAAACTATTCTGCGTCCACTACTAGATCAGGAAATCCGAAGCCCGAATGGAAGCGCTACAAGCAGTACACACGCGAGCACATCCAAGACGCAATGAATGCCGTACGCACGAAGCAGATGAGTGCACTCCAAGCTGCTCGCAAGTACGGAGTGCCGTCTCGCACCCTCTACGACAAACTGAAGAAAGCAGGTATTCTACCGTCCAGAGCTCCAGGCGGTGTTCAACGCCGGGACTCTGGCTCACACGGTGGTAGCGCACGTTTTCCGTACACTTCGCCCACACTTAATGGTAGCATTTACGGTACGAGTCTAGGGGCCGCCGCGGTCTCGGAAAGCGAAAGCGAGACCAACGGCTTGGGGTCATTGAGCATCGGCGAGACTGCCTACGGCATCGTTCGCAGTCTCCACCAGCAACGCGATTCTGTCAGTCTCACTTCCCCTTCTATATCCATTAAttccgtcgccgccgccgccgctgccgctgtCGTGGCTGCTGCCGTGGCTGAAGACACTGTAATGGACATGTCGAAGACGCGCACTCCCAGTCCCGCCCATCATCATCCTGCAATTGTTTTCAAACGCTCAGCACACTCGCCCATCCATGCCGAAGAGGAAGATCAAGTTGAAGATTTATCCATGTCGCGTACTTCCGGGGGTAGCGATGGGCAGCCTCTCGACGGTAGCCGGTCCAGCGCCTCGCCCGTCACTGCTGCTCACACTCTGCCTCTCGCAGCCATGCCCTTGCCCCTGCGCGCTGTCTCACCCGTCGTCAAGCAAGAGCGAAACGAGGATTCTAATGACGGCTCCACTCGTACCTGA
- Protein Sequence
- MSDPGQQQYCLRWNNHSTNFVTVFEELFRTEAFTDVTLSAYDGFALRCHKMVLAACSTYFQDLFIKSTTCENPVVILNDVNHVEIKAILDYMYRGEVNVAQDQLASLLSTARCLRIKGLVDDTDPPQENHKVEEEEILTPPPSNSTSTSSAAHSSGYLTPPPNPNTTFIPYGNIPVEQNHNHLASWSAFSGQPPLQQDNVQGPKSQGTSTHNSRSTSRRKLSGSYERSSESSPLTKKKYSSIVHQSRDSQILRNVLHHGQQDLHIPDNVHQKSNGSLHDRRNSEEHIETPMDDHEEKHVPLANYSASTTRSGNPKPEWKRYKQYTREHIQDAMNAVRTKQMSALQAARKYGVPSRTLYDKLKKAGILPSRAPGGVQRRDSGSHGGSARFPYTSPTLNGSIYGTSLGAAAVSESESETNGLGSLSIGETAYGIVRSLHQQRDSVSLTSPSISINSVAAAAAAAVVAAAVAEDTVMDMSKTRTPSPAHHHPAIVFKRSAHSPIHAEEEDQVEDLSMSRTSGGSDGQPLDGSRSSASPVTAAHTLPLAAMPLPLRAVSPVVKQERNEDSNDGSTRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01381441;
- 90% Identity
- iTF_00713746; iTF_00712767; iTF_00713002;
- 80% Identity
- iTF_00713746;