Basic Information

Gene Symbol
ct
Assembly
GCA_900475205.1
Location
UXGB01000014.1:208512-221229[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.7e-28 8.4e-24 84.1 0.0 2 72 393 464 392 469 0.95
2 3 1.9e-32 2.8e-28 98.4 0.0 3 77 832 907 830 909 0.96
3 3 4.8e-31 7.1e-27 93.9 0.0 3 76 1073 1147 1072 1150 0.96

Sequence Information

Coding Sequence
ATGGAGGAGGTGTCGAGGCTGCAGATGAACCTGCAGCGCCTGCAGGAGACGAGCGCCCAGGCGACGGCGCGGCTCGAGGAGGAGCTCGAGGCGCGCAGGCAGCACATCAGCCGGTTGGAGAGCAAGCTGGACCGGCAGAAGGACTACGAGGAGCTGAAGCGCGAGATCAGCGTCCTGAGGTCCGTGGACCTGTCGCAGATACCGACCGGTGAACCCGGCAAGAGCCTGGAGCAGGTGCTCATGGAGCGCTCCAAGGCGCTCCAGCAGGCCGAGACCCTCAAGCCGCCCAGCACACCCGACACACTCGGTGGACTATCGTCACCCCTGCAACGGGCCGCGACCGCCTCGCCCCACGGTGCGGTGATAGCGCCGCCATCGTCCTCCCTCGTGTCCTCACAGTCGTCGCTCCCGAGCCGCTCCACCCCCACGCCCTCCTCGGCCGCCACCTCGACGAGCTCCTCGCTCCTCTTCCCCCCGCCCCTGCAAAACGTCGAGACCTTCGGCTCCTTCCTCGGCGAGGAAATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCGATCATGagtcagcagcagcagcagcagcaacagcagcaacagcagcagcaacagccgACGTCCCAAGCGTCCACAGTCGGCCTCCATCCGACCGGTGCACCGGGCAGCGCTCTAAACCACCTCCCGTCGCCGACAGATCCCATCTCGAGCTCGAGCACGCCCGCCAAGGCGAGCACGCCGCTCGGCAGCGCGGCCGCCCTCGACTCGGCGGAGAAGGCGACGACGCCGGTCTCGGGGCACGAGACCCCGGCCCCGCCCACGCCCTCCTCCACGACGACGCTCACCTCGCCGCCGATGCTGCAGGCCCCGGCCGACGGGGCGCTGCCCGTCAACGGCCCGGCCGGCACGCCCGCGCCCAAGAGCCCGCAGGAGGAGTCCGCCTGccacaacaacaacaacaacagccACCACCTGGCCAACAACAACATCGGCGGCCTCGGCGTCCTCGACAGCCTCAAGAGCCCCTTCCGCTTCGACGAGCGCTCGCACCCCTTCCGCTTCGGCGACGAGTTCGGCCCGGTGATGGCCGGCCGCCTCGGCGAGTCCCTCATACCCAAGGGCGACCCGATGGAGGCGCGCCTCCAGGACATGCTGCGCTACAACATGGACAAGTACGCCTCGCAGAACCTCGACACGCTGCACATCGCGAGGCGGGTGCGCGAGCTGCTCTCGATACACAACATCGGCCAGCGGCTCTTCGCCAAGTACGTGCTCGGCCTGAGCCAGGGCACCGTCAGCGAGCTCCTGAGCAAGCCCAAGCCCTGGGACAAGCTCACGGAGAAGGGCCGCGACAGTTACAGAAAAATGCACGGCTGGGCCTGCGACGACAACGCGGTCTTGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCggcgttcgcgcgcggcccccagGAGGGtggcggcgcggccgccgccgggcCCGGGGGCAACGGCAACGTGGCCGGTAGCGGCTCCGCGGCCGGCGCCGTCCCCCAGGACCTGAGCGAGGAGCGCATGGCGCAGATACTGTCCGACGCAGGGCACATGCAGCTGGCCCGGCAGAGCGAGCCCGACACCTCGAACGACACCGACAGCAAGAGCCCCAGCCGGCTGAACTGCCCCAGCCCCTTCGGCAAGGACCGCAGCCTCGACAGCCAGAACCGCCGGCTCAAGAAGTACGAGAACGACGACATCTCGCAGGAGAAGGTGGCGCGGATCTACCACGAGGAGCTGGCGAAGATCACCGGGAGGCGCGTGGATGACCTCCGGGGTCCCAGAGACTTCCCCGCCAGCGCGATGTTCCCGCACTTTTTCAGCGGGCAGAACCTGCAGGGCATGGAGCGCACGCAGGAGGAGATCCGCATGGCCCTGGACGCGTACCACCGCGAGCTCCAGAAGCTGAACGTGGCGCAGGGGCTGCCCTACCCGCCGCAGATCTCGGGCCTGCTGGCCCTGCAGCAGCACGCCATCCAGCAGCACCACCTGTCGACGAACGGCGGGGCCGCCGCCGGGGCCAactccgcggccgcggcgatcgccgccgcCCAGGACCTCAGCCTCGGCAACATCCTCAGGAGCAAGATGATCAACGGCGTGTCCGAGGAGGAGAAGGAGAAGATGGAGGAGGCGATGAGGCACGCCGGCAGCGCGTTCTCCCTGGTGAAGCCGAAGCAGGAGCCGACGGGCGCCCAGTCGACGCCCGGCGGCTCCAGCGCCAGCTCGCCCCTCGGCAACTCGATCCTGCCGGCGGCGATGGCGCCCGCCGAGGAGTTCACCGGCACCGCCGCGGCCAGCCCCCTCCAGAGGATGGCCTCCATCACCAACAGTCTTATCAGCCAACCGTCCACGCCGACCCACCACTCGGCCAACCAGCGGCCGCTCAAGGCCGTCCTCCCGCCCATCACCCAGCAGCAGTTCGACATCTACAACAACCTCAACACCGAGGACATCGTGAAGAAGGTGAAGGAGCAGCTCTCGCAGTACTCGATCTCGCAGCGTCTGTTCGGCGAATCCGTCCTGGGCCTGTCCCAGGGCTCCGTATCGGACCTCCTGGCCCGGCCCAAGCCCTGGCACATGCTCACGCAGAAGGGCCGCGAGCCCTTCATCAGAATGAAGATGTTCCTGGAGGACGACAACGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCACCGGAAAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACGCCAATGAAACCGATGCTCCCGGCGAAACTGGCCCAAGAACAGATGCAGAGCATGGCCAAGGCCCAGGCTGCGGCGCAAGTCGCCGCACAGGCGGCCGCGGCAGCCCAGCATCAGGAGAGCCAAATGCAACTGGGGCCGCCCCAGCAGAGTCCGCAGCTGCCGACGCACACCCAGCCGTCACCCATGATGCTGACGCCCCCGGGACCAATCCTCCCCCACGGCCAGATGAACATGCAGGAGGTCCAgaagaagcagcagcagcaccagcagcaactgcagcagcagcagcagcaccagaGCGTCCAGATGAACCTCCACTCGCCGCACCACCAGCTGGCCCCCTCGCCCCTGCGCGGCCTCCACCCCCACATCCCGCAGAGCGTCTACGAGGCGGCCGCCTTCACCCAGGACCTCGACACGCAGACCCTCACGACCAAGATCAAGGAGGCACTGCTGGCCAACAACATTGGCCAGAAGATCTTCGGCGAGTCGGTCCTCGGCCTCTCCCAGGGCTCCGTGAGCGAGCTCCTCAGCAAGCCCAAGCCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTCTGGCTGGCCGACCCCCACAACGTCGACCGGCTGCAGGCCCTGAAGAACGAGCGGCGCGAGGCCAACAAGAAGCGGCGCAGCAGCGGCCCCGGGCACGACAACAGCTCCGACACCTCGAGCAACGACACGGCCGAGTTCTACCACGCCGCCTCCCCCGGGCCCGGGCCCACCTCCGCCAAGAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCCTTCGCCCTCGACCCCTACCCCAACGTCGCGACGATCGAGTTCCTCGCGAGCGAGCTCGGGCTCTCGTCGCGGACGATCACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGCCGCACGGGCAGCCGGAGCCGCAGTCGCCGCGCGAGCCCGGCCAGCCCTTCGACCCCGTGCAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATCCAGAAGGAGCGCCTCGGCCTCGGCAGCGTGCCCCTCGCCTACCCGCCCTACTTCAACCCCAACCTGGCCGCCCTCGTCGGCAGCGCCCTCAAGGAGCAGTGCTCCGGCCTGGACCTCTCGATGGGCTCGCTGAAGCGCGAGCCCAACCAGGAGTTCGAGGACGAGGACGCGGAGGACGCGATGAGCAACCTGGGCAGCGAGGACTCCGAGGGCTCGGCCGGCAGCATAAAGCGCGAGCCGACGGAGGCGCCCGCCCCGGCCAACACCTCGAGGTCGAACCGGCGGAAGCCCGCGGCGCCCCAGTGGGTGAACCCCGAGTGGCAGGAGCCCGCGCGGACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAGACCGACGACTACGGCGTGAAGCGCGAGGCCGAGGAGACGGTGCGGGTCGAGCCGACGCCCGTGCAGGACCGCTACGAGGAGGACGCGCAGAGCGACGTGTCCTCGGTGTCGGCGGCCAACGCGCCGGACCGCGAGAGCCCCTCGCCCAGCCCCAAGTCGGCGCAGAACAGCCCGGCGCCGTCGCCCAGGCCGCCCTCGGCCCCGCAGCACGGGCCCCAGCCGGCCGAGCTCGCCTCCGAGAGCCCCAAGGACATCGTGAAGCACGAGCCCGAGGAGACGTGGGACTACTAG
Protein Sequence
MEEVSRLQMNLQRLQETSAQATARLEEELEARRQHISRLESKLDRQKDYEELKREISVLRSVDLSQIPTGEPGKSLEQVLMERSKALQQAETLKPPSTPDTLGGLSSPLQRAATASPHGAVIAPPSSSLVSSQSSLPSRSTPTPSSAATSTSSSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQQQQPTSQASTVGLHPTGAPGSALNHLPSPTDPISSSSTPAKASTPLGSAAALDSAEKATTPVSGHETPAPPTPSSTTTLTSPPMLQAPADGALPVNGPAGTPAPKSPQEESACHNNNNNSHHLANNNIGGLGVLDSLKSPFRFDERSHPFRFGDEFGPVMAGRLGESLIPKGDPMEARLQDMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKEYVSGKEQGMPAFARGPQEGGGAAAAGPGGNGNVAGSGSAAGAVPQDLSEERMAQILSDAGHMQLARQSEPDTSNDTDSKSPSRLNCPSPFGKDRSLDSQNRRLKKYENDDISQEKVARIYHEELAKITGRRVDDLRGPRDFPASAMFPHFFSGQNLQGMERTQEEIRMALDAYHRELQKLNVAQGLPYPPQISGLLALQQHAIQQHHLSTNGGAAAGANSAAAAIAAAQDLSLGNILRSKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPTGAQSTPGGSSASSPLGNSILPAAMAPAEEFTGTAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDIYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMLPAKLAQEQMQSMAKAQAAAQVAAQAAAAAQHQESQMQLGPPQQSPQLPTHTQPSPMMLTPPGPILPHGQMNMQEVQKKQQQHQQQLQQQQQHQSVQMNLHSPHHQLAPSPLRGLHPHIPQSVYEAAAFTQDLDTQTLTTKIKEALLANNIGQKIFGESVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADPHNVDRLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQPPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLDIQKERLGLGSVPLAYPPYFNPNLAALVGSALKEQCSGLDLSMGSLKREPNQEFEDEDAEDAMSNLGSEDSEGSAGSIKREPTEAPAPANTSRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSVSAANAPDRESPSPSPKSAQNSPAPSPRPPSAPQHGPQPAELASESPKDIVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309398;
90% Identity
iTF_00714260;
80% Identity
iTF_00713563;