Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_900480045.1
Location
UXGC01000019.1:142397-148789[+]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.33 5e+03 -1.9 0.2 11 24 440 453 437 456 0.87
2 2 4.1e-25 6.2e-21 74.6 4.3 2 50 514 562 513 562 0.96

Sequence Information

Coding Sequence
ATGGCGCACCAAACGTATAACACCATGGGCTACAACCAGCGGGGCCCGATGGGGGGCATGGCCGGCCCTATGGGCATGAACAACTACGCCGGCATGGGCACGGTCAACCCGATGATGCCCTCCATGAACTCGATGAACTCGATGAGCGGCATGAGCAACGTGAACCCCATGAACCCGATGATGATGGGGAGCAGCGTTAATAACATGAACGGCATGAGCGGAATGACGCCCATGAACCCGATGAGCAACATGAATAACATGGGAATGATGAGCGGCGGCATGGGTACCACCGCAGTCCCCATGAATAAAATGACGATGCAGCAGCAGACGCAGCAGGCGTACGCGAGACGCATGGGGCCCTATCCCAACCCGGCGATGCACGTAGCGCAAAAGCGCATGCAGCAGCAGCCCCCGCCGCAGCAGCAGGTCCCCTACGGCGCGGCCGGTCCCAACCCAACCGGCATGCCGCACGCGGCCTACGGCGGAATGACCGCCGCCCAACAATACCCGAACGGTtacgcgagcgccgccgcccgACCCAACATGAATCCGGCTGCGATGTCGGCGACGGGCTACCCCGGAGCTGCGTCTGCTGGGATGATGCGGAGCGCCGGCGGCGTCAGGCAGCAGCAGCCCCAGCcccagcaacagcagcagcagcagccgtcGATGGGTCCCGGCTACGGGGCTGTACCCAATCAGGCTAGTCAGTACTACAACAGCCAGCTGCAGTCGTCGACGGGCGTCAACCCCAGCCCCGGCAACATCAACGTCAACGTCAACGTCTCCTCGCCCTACGGCGTCAACAACGGACAGTACCAGCCGGACTCGCCCATGAGGTCGGCCCTCGGAGTCCAGCCGATCGGCAACATGAGCTATCAGCACAGTCCGATACCCGGCAACCCGACTCCACCGCTCACCCCGGCCGGCAGCATGACGCCCTACGTCAGCCCCAGCTCGGACGGCAAGCACGGCTTCAACGACATCAAGCCCATGATGCCAAAAGAGGACCAACTGAGACTAACATTCCCCGTGAGGGACGGCATGATCATGGCGCCGTTCCGTCTGGAGCACAACCTGTCTGTGAGCAATCACGCATTCCAACTGACGGCCGACGTGCACGAGGCTCTGATGAAGCGGACGGACCTCGAGCTCGAGCTCAAGTGCTTCCACCACGAGGACAAGCAGAGGAACACGAACTGGCCGCAGAGCGTCCAGATCTCGGTGAACATGACGCCCCTGATCATCGACCGGGGCGAGAACAAGTCCTCTCACAAGCCCCTGTATCTCAAGGACATCTACCAGGCCGGGCGCAACACCATCCAGATCACCGTCTCCGCCTGCTGTTGTTCGCATCTATTTATCCTGCAATTGGTCCACCGGCCGACCGTACAGAGCGTACTGCAGGGCCTGTTGCAAAAACGGCTTCTCACCGCGGAGCACGGCGTATCGAAGATAAAGCGAAACTTCAACAACACTCTTCCCAGCAACGGAATACCTACAGAGAAGGACGTCGTTGAGCAGACGTCGATTAAGGTGCCGCTCAAGTGTCCCATAACGTTCAAGCGTATCTCTCTACCGGCAAGGGGCCAAGAGTGCAGGCACATACAGTGCTTCGATCTGGAATCGTTCTTGCAGCTCAACTGCGAGCGAGGAAATTGGAGGTGTCCAGTCTGCACTAAACCAGCCATGCTAGAAGGCCTGGAGGTAGACCAGTACATGTGGGGAATCCTGAACAGCACGAGCTCGGACGTGGACGAGGTGACGATAGACTCGTCGGCGAACTGGAAGCCGAAGAAGGCCGAGGAGGACAGCGAGTGCAAGCGCATGACGAAGGCTATGTCGCCGGGCAGCATGAACATGCCGACGATGAACAGCTGGATAGACGCGCATCAGGCGATGAGCCCGTACATGCCGCCCGACATGAACAGCATCCCCAGCAACGTCTCCACGAACATGACCGGCATGGGCACCGCCGACATGTCCATGAGCGGCAACCCCGGCCAGAACGACTACGCCGGCACGAATCCGCTCTCACACCTGAACGACCACGCTAACTCCCTCGACCATCTCAGTGCCATCGACAAGTCACTAAGCGATCAGATGCCCCACACGCCGCACACGCCGCACACGccaggcggcggcggcggaaaTAGCGGCCCCCCGAGCGTCGCGCCCTCCGTCTCCCAGGACACCAGCGGTAACAACCTCAACACCTCGACGGGCAGCGGTGTACCAGGAGTCACGGACACCTCCGACATCATCGCCTCCGACCTGAACTTTGACCCTGCGGCCGTCATCGACGGCGACGCCGGCCAAGAGGCTCTCAACCTCTTGCCAGACCAAGTTGACCCGATGGAGTTGCTGTCGTACTTGGACCCGCCGGACCTGAACACACCGCCCAGCAGCGGCGCGAGCAGCGGCAACCCACCGTCGAACGACGACATCCTCGCCCTCTTCGAGTAA
Protein Sequence
MAHQTYNTMGYNQRGPMGGMAGPMGMNNYAGMGTVNPMMPSMNSMNSMSGMSNVNPMNPMMMGSSVNNMNGMSGMTPMNPMSNMNNMGMMSGGMGTTAVPMNKMTMQQQTQQAYARRMGPYPNPAMHVAQKRMQQQPPPQQQVPYGAAGPNPTGMPHAAYGGMTAAQQYPNGYASAAARPNMNPAAMSATGYPGAASAGMMRSAGGVRQQQPQPQQQQQQQPSMGPGYGAVPNQASQYYNSQLQSSTGVNPSPGNINVNVNVSSPYGVNNGQYQPDSPMRSALGVQPIGNMSYQHSPIPGNPTPPLTPAGSMTPYVSPSSDGKHGFNDIKPMMPKEDQLRLTFPVRDGMIMAPFRLEHNLSVSNHAFQLTADVHEALMKRTDLELELKCFHHEDKQRNTNWPQSVQISVNMTPLIIDRGENKSSHKPLYLKDIYQAGRNTIQITVSACCCSHLFILQLVHRPTVQSVLQGLLQKRLLTAEHGVSKIKRNFNNTLPSNGIPTEKDVVEQTSIKVPLKCPITFKRISLPARGQECRHIQCFDLESFLQLNCERGNWRCPVCTKPAMLEGLEVDQYMWGILNSTSSDVDEVTIDSSANWKPKKAEEDSECKRMTKAMSPGSMNMPTMNSWIDAHQAMSPYMPPDMNSIPSNVSTNMTGMGTADMSMSGNPGQNDYAGTNPLSHLNDHANSLDHLSAIDKSLSDQMPHTPHTPHTPGGGGGNSGPPSVAPSVSQDTSGNNLNTSTGSGVPGVTDTSDIIASDLNFDPAAVIDGDAGQEALNLLPDQVDPMELLSYLDPPDLNTPPSSGASSGNPPSNDDILALFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-