Basic Information

Gene Symbol
pnr
Assembly
GCA_900480045.1
Location
UXGC01001309.1:7942-16718[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-05 0.055 13.8 5.5 1 31 420 451 420 455 0.86
2 2 1.1e-17 4.9e-14 52.4 7.1 1 35 481 514 481 515 0.97

Sequence Information

Coding Sequence
ATGAAAGAGAATCTGTGCAAGCAGGAAATGGAGAGAAAAATGGAATGGGACAACCAGCAACAGCCCCAGCAGCAGCTCTCGGAGGCCGGCTCGCCCCACGATGTGATAACGAGCCGACGACACGTGCGCACGATCACCACGGCCGGACACATAGAGACTCTGGCGGAGGCcgagccgtcctcgccggAGGCGGCGGGCCAGCCCGAGCTTCAGCAACACGTCGTCCAGCAGCAGACGAGGATCAAGCAGGAGAGCCAGGAGCAACCGCCGCCGCCGTACGCCGAGGAGCAGGCTCAGTACATACGCATATCCCACGAGCAAAGCCCCGAGGACCAGCAGAGACTCGCCGAGCAGCAGAAGCAGCACGTTATCTACGCTACCGCCAATGGACAAGTCGAGGCGGCCGAGAACAGAGAGCCCACTATTGCGCTCGCCGTCGAAGAGGCACCCAGGTATGAGACCCCGGGACCAGATCGGGTTGAAATAGACCGAACGGTGACGTACGTGTACACAAACGAGGAGGATCTGAGGCGCGAGATAATGGAGCAACACCGACAGTCGGTGCCTCATGAACGTTACAGCCCTCACCAGGGTGGCTCGCCGAACGGCGAGAACCTCGCCGAGGGGCAGACGCTGGTCGCCACTCAGAACTACCCACATCATCACCTGGTCGCGTACACGACCGACACTATCAAGTATAGCGCGGAGGTTAGCGTCACCCCCGAGAATCTGAAGGCCTCGTACACCACCCTCGAGACCATGCCACCCACCCAGACTGTCCCCTACGCACAATTCATACCCACTACAGAAACATTCCAGTCGTTACCTGCCGGCTACGGCTACCCCAAGCATCAGGATATCCTCGTTTGTCAACCGTCTAGTCAACCATGTAGGAGTGGCGAGTACGAGCACGCGACGAACATGCTGCTGAAGAGCGACCCCACGCTGACCTCTTCGTCGCTCATTCGTTCGGGCGCCCTGGCGTACGAGCAGCCGCAGTCGCCGTCGCAGGTGAGCATGTACACCAGCGGCTCGGTGACGTACCAGATCACCAAGCCCAGCGAGTACTACAACCAGTCGCCGACCTTCGACTACGGGCCGAATTACGCGAGCGTGCCGATCTcgggcggcgacggcggcggcctGATATTCGCGACGAGCAACCCCTACATGGCCACCGGCTCCAACACCTCGGGCTGGCTGACGGCCAACTCCGAGGACGCGTACGAGGCGCAGCTGCCCGGCCCCGGCAAGGAGTGCATCCACTGCTGCTCCAGCGACACCACCAGCTGGCGCAAGGACCCCACCACCGGGCACCTACAGTGCGCCGCCTGCGGCAACGTCTACTACAAGCCCAACGGCATGCCCAGGCCGCCGGCGCAACGCGTCAAGCCCAAGGCCACTGCACCGCCGACTGGAGGAAGAAGGATGGGCGTGAGGTGTGCAAATTGCTCAACCAACACAACTACCTTGTGGCGACGAAACAACAATGGAGAACCAGTGTGCAACGCCTGCGGACTTTATTACAAACTTCACCAGGTGAATCGGCCGATGAGCATGAAAAAGGACAGCATCCAGTCGAGGAAAAGGAAGCCGAAAAATCACAATGCGaatgtaaataacaataatcacGGAGTGTCGAATGCAATTCACAAACCAGAGATCAAAGCCAGCTTACTCGCGGAAACGAAGATGCAGTTGAGTATGTTCGCTAACGGAGGCGGGGACGGTGGGTCCGAAGAACATTACGCGCCCGTCAGTAGCGCTTTACCGACCGCCCAGAATCCGCTGGCACTGCCGTCTTACGGTACCTCCCACTCACCCTTACCTTTACCTACCGCCGCCGATTTGAATCGCCAAACTACTCTTACCGTGCCACCGCTAGAACCGGTTAATAACCGGCCGAACGCGGACCTGACATCGGTGATAACGTCGACGGCAGCTGCACAAACGAGCGAGAGATCGTAA
Protein Sequence
MKENLCKQEMERKMEWDNQQQPQQQLSEAGSPHDVITSRRHVRTITTAGHIETLAEAEPSSPEAAGQPELQQHVVQQQTRIKQESQEQPPPPYAEEQAQYIRISHEQSPEDQQRLAEQQKQHVIYATANGQVEAAENREPTIALAVEEAPRYETPGPDRVEIDRTVTYVYTNEEDLRREIMEQHRQSVPHERYSPHQGGSPNGENLAEGQTLVATQNYPHHHLVAYTTDTIKYSAEVSVTPENLKASYTTLETMPPTQTVPYAQFIPTTETFQSLPAGYGYPKHQDILVCQPSSQPCRSGEYEHATNMLLKSDPTLTSSSLIRSGALAYEQPQSPSQVSMYTSGSVTYQITKPSEYYNQSPTFDYGPNYASVPISGGDGGGLIFATSNPYMATGSNTSGWLTANSEDAYEAQLPGPGKECIHCCSSDTTSWRKDPTTGHLQCAACGNVYYKPNGMPRPPAQRVKPKATAPPTGGRRMGVRCANCSTNTTTLWRRNNNGEPVCNACGLYYKLHQVNRPMSMKKDSIQSRKRKPKNHNANVNNNNHGVSNAIHKPEIKASLLAETKMQLSMFANGGGDGGSEEHYAPVSSALPTAQNPLALPSYGTSHSPLPLPTAADLNRQTTLTVPPLEPVNNRPNADLTSVITSTAAAQTSERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00714059;
90% Identity
-
80% Identity
-