Eadl012937.1
Basic Information
- Insect
- Eurytoma adleriae
- Gene Symbol
- -
- Assembly
- GCA_900480045.1
- Location
- UXGC01001036.1:16197-20138[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0088 0.93 10.8 2.6 2 23 55 77 54 77 0.92 2 13 0.22 23 6.4 0.2 2 15 81 94 80 97 0.88 3 13 2e-05 0.0022 19.1 1.4 1 23 107 130 107 130 0.96 4 13 0.073 7.8 7.9 0.2 1 23 141 164 141 164 0.97 5 13 0.039 4.1 8.7 0.5 2 23 184 206 184 206 0.96 6 13 9.7 1e+03 1.2 1.4 3 20 252 268 251 268 0.83 7 13 6.4 6.8e+02 1.8 4.4 1 23 278 301 278 301 0.95 8 13 0.00089 0.095 13.9 3.4 2 23 303 324 302 324 0.97 9 13 1.7 1.8e+02 3.6 0.7 1 23 458 482 458 482 0.87 10 13 0.9 96 4.5 1.2 2 19 486 502 485 505 0.76 11 13 0.24 25 6.3 8.2 2 23 513 535 512 535 0.97 12 13 0.0063 0.67 11.2 0.5 1 21 594 614 594 615 0.94 13 13 0.42 45 5.5 0.5 1 13 622 634 622 646 0.87
Sequence Information
- Coding Sequence
- atgttttGCTGCCCAGGTCCATCTCATGGTTCGCATAGCATCTATCTTAAACAGGAGGCTGTTGACATTGATAATTTTTCCGaagtCCAAATGGATTCATCTTCTTTCTTTAACGAATACTTTACCACTCAAAGTTCTGATGAAGCAAAATCTACCAACTTACGTTGTCTGATATGCGATATCGAATTTCCAGATAAGCACGAATTGCACTCGCACCACTTAGCCAAACACGCCGTTTCTAAGTGTCCGAAGTGCGGGCCGGCGTTTCGCAGCATGTCTCATCGCATGCACTATACAAAGTGCGGCAAAACCAACGTCTACAAGTGTCCCCGCTGTAAAGAAACCTTCAGATCGGTCTCCCAGGTCAAGCGGCACATCAACGAGAAGCACCTGCTGAACAAGTTCGAGAGTCACCGTGTCTTCATGTGCGACCTCTGCGTGTACATCGGCCGCAGCAAGAGCAGCATCGCGTCGCACCTGCGGCGCATCCACTGGATGCTGTTCCCCGATTTCGAGGAGAAATTCGCGGAGCCGGTGAGCGAGGTGCGCCGCTGCCCCTTCTGCGCCTACTGCACCAACGTCCCGGAGAGCCTGGCGATGCACATGAAGGAGTCGCACTGGAACGAGAGCCGGCGCAGCTTCGTCTGCCCCTCGTGCCAGGCGGACATCAAGTCGATAGCCGGCTGCCACCGGCACGCCTGTCCACCGGCCGCCGAGGAGACGGCCGCGGAGGTGGTCGCGGAGTACGAGGACTGCGCTAAGTGCGGCAGGTCCATCCGGAAGAGCAAGATACACCATCACCAGTGGATTTGCAGCAGCGGCAGCAAGAACTTCAGGTGCTCGCAGTGCAGCTTCACGACCTACTGCCCGAGCAACGTTAAGTCGCACTTCCGCCAGGCGCACCTCACCTGCACCAAGTGCGGCAAGTGCCTGAAAAACCTGGCGTACATGGAACGTCATAAGTCCACGCACACTAGGCCGCAATTGAAGGTCCGCGAATTTTCCACTATGGCGCTCATGCCGCCGATCGTGGCTACTGTGGATCGGGAGGAAAATGTGCCCGATGATTCTTCCAATGTTGGTAATTATGAAGTAGTCAAAACAGAAATTATTCAGGAGGAAGATCCGATCGAAGTGAACCACGGGCATTTCACTTTTGTGAAAGTCGATGAGGAAATTTACCTAGACGATACTGGAAGTATTGACAACGAATATTCAGACATAGaggATGATCCTATTGTTATTCAAGATATTACCAATGAAAATCTCGACGAAAATACCGAGAATAACTACGAAAGAATAACTACGCGTAGCAGTACCCGttctaaaatttacaattctcCCAAGAGGGTCAAACTGTTCAATCATCCGCATGTCTGCGTTACGGGCTGCGGCTTCAGCGCTAGAACTAAACGCGACTTGTGGTTCCACATGACCGACCAGCACGGTGTTAGCAAATGTCCGAACTGCGGTcctaaatttaaaacgatGAACTTCACCCAGCATAGTCATACGTGTGGTAATACACCGATATTAAAGTGTCCTCATTGCACGTACGTTACGTGTAAATTGACCTACTTCAATCATCACGTGAAAACTAAGCACAAAGAGGCACGACCAATCAGCAATAAAGCAAACAAAACAAGaccaaaattgatgaaaagaaaaagatcgcTCTCCTCGACCGTATGTCGCATATGTTTCAGCTTCAAAACTACCAATGCTAACTTTATGGCAAAGCATATGACTTCTAAACATTACAATAAAGACACGCAGATGTTTAAGTGTCCCTCGTGccaaaaggaaattaaaaacagataCAATCTCTTCGGCCACGTGCAAAGTTGCAATCCGAATGTACAATATAGATGTTCTTACTGCGACCAATTTACTACTACGAAAATAGGATCGCTGATATTTCATCAGCGACTTAGGCACCCAGAGATGAAATTTGATTGCAATACTCATCAGCCAGAATAG
- Protein Sequence
- MFCCPGPSHGSHSIYLKQEAVDIDNFSEVQMDSSSFFNEYFTTQSSDEAKSTNLRCLICDIEFPDKHELHSHHLAKHAVSKCPKCGPAFRSMSHRMHYTKCGKTNVYKCPRCKETFRSVSQVKRHINEKHLLNKFESHRVFMCDLCVYIGRSKSSIASHLRRIHWMLFPDFEEKFAEPVSEVRRCPFCAYCTNVPESLAMHMKESHWNESRRSFVCPSCQADIKSIAGCHRHACPPAAEETAAEVVAEYEDCAKCGRSIRKSKIHHHQWICSSGSKNFRCSQCSFTTYCPSNVKSHFRQAHLTCTKCGKCLKNLAYMERHKSTHTRPQLKVREFSTMALMPPIVATVDREENVPDDSSNVGNYEVVKTEIIQEEDPIEVNHGHFTFVKVDEEIYLDDTGSIDNEYSDIEDDPIVIQDITNENLDENTENNYERITTRSSTRSKIYNSPKRVKLFNHPHVCVTGCGFSARTKRDLWFHMTDQHGVSKCPNCGPKFKTMNFTQHSHTCGNTPILKCPHCTYVTCKLTYFNHHVKTKHKEARPISNKANKTRPKLMKRKRSLSSTVCRICFSFKTTNANFMAKHMTSKHYNKDTQMFKCPSCQKEIKNRYNLFGHVQSCNPNVQYRCSYCDQFTTTKIGSLIFHQRLRHPEMKFDCNTHQPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -