Basic Information

Insect: Eurytoma adleriae
Gene Symbol: prdm10
Assembly: GCA_900480045.1
Location: UXGC01000099.1:156033-160122[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.007 0.75 11.1 4.9 1 19 608 626 608 630 0.92

2 9 7.5e-05 0.008 17.3 1.9 1 23 638 660 638 660 0.98

3 9 7.8 8.3e+02 1.5 0.0 2 12 668 678 667 683 0.83

4 9 0.00011 0.012 16.8 3.7 1 23 697 719 697 720 0.95

5 9 0.15 16 6.9 3.5 1 23 725 747 725 747 0.97

6 9 1e-05 0.0011 20.0 1.5 1 23 753 776 753 776 0.96

7 9 0.0021 0.22 12.8 1.0 1 23 809 832 809 832 0.97

8 9 4.5e-05 0.0048 18.0 2.4 1 23 854 877 854 877 0.97

9 9 0.0046 0.49 11.7 3.4 3 23 915 936 915 936 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.007	0.75	11.1	4.9	1	19	608	626	608	630	0.92
2	9	7.5e-05	0.008	17.3	1.9	1	23	638	660	638	660	0.98
3	9	7.8	8.3e+02	1.5	0.0	2	12	668	678	667	683	0.83
4	9	0.00011	0.012	16.8	3.7	1	23	697	719	697	720	0.95
5	9	0.15	16	6.9	3.5	1	23	725	747	725	747	0.97
6	9	1e-05	0.0011	20.0	1.5	1	23	753	776	753	776	0.96
7	9	0.0021	0.22	12.8	1.0	1	23	809	832	809	832	0.97
8	9	4.5e-05	0.0048	18.0	2.4	1	23	854	877	854	877	0.97
9	9	0.0046	0.49	11.7	3.4	3	23	915	936	915	936	0.98

Sequence Information

Coding Sequence: ATGGACCAAGGGGGCCCTCCTGAGGGGGCCCCTGTTGTCATCGCTGACCCCATGGATATGACTATCATTGACAAAGTTTGCAGCGATTCCAACTGGCCTGACGACAACATTGTCTCCTCTTCAACCTTCTCAGATCATCCCAAGAAGCTCAACAAACTCTTCTTTCTAACGGTCGGACTTGTGGAGGATCAAGCCAAAGATTTTGGAAGGATGTATCCATCATATGAACAAGAAGTAGCGTTTTCATCCAGAGCTAATTCTCCATTGTCAGACTTTGAACATCGTGTGAGTTCCCATGATCCAAATATGAGCTCTGCTGCAAGATATTCACCAACTCCTGTTCCACTGCCTTCTCTACCTTTCAATAACTCTGTGGTTATTCTTCAAGAACCTTCTTCTCCTCTTATCTCAACTTCAGAGTCTGCAGTACGAATTTCAAGCGACTATTCAACGCAACTAACTGATCAGTCGTCAACACCTAGTTTGTCTCATAGCGAAAATTCTGAAGATTTTACAGACAGTACCAGTGATGGACTTGTTTCAAGTGTAGGAAATGAATTAATGCTCATACAAGGTTCAAATTCAGATTTGGAACCCTCTTCTACACCACTCATGTTATCAGGAATATCAGGATCTGACCTAGCATTAACAAGAGATTTTCTTGTCATGCAAGAGGATCAAATAAATGTGATTAATTCTATGAAATTGAATTCCAATCTTGATTCCAATATCAATCAAGTTACAGAGTCTATTTTACCTCATGACTTAGATGACGAAAACAACGCACAAATAACAacagtgaaaaatttcaagagaTTTTCTGAAGATTCTGAACACATTTTGGATTCAGAACAAAAACATGTTCATTGGTGTAAAGATCAAACCAGTGAAAACAATAGtttatgGTTTGAAGACTGTGATAGTACTTGCACAGATACAGCAGATTGCTCCTTGCACAGTGTGTGCACAATTGCTGATCAACCAGTTCCTTCTAGAGCTGTTGCCACATTACCAGGCCTCTATTTATCAATTGATAAACTTCCAACATCCGACATTAACGGCACATCGCCGGAATACGGAGTTTTTGCAAAACGAAATATTCGTCATCGAACTCAGTTTGGTCCAATCGAAGGAATTTTACATCCTTACGATGGCTCAAAAATAATTGGTTTACCATTGTTATTAGAAACCAAAGAGGAAggtgaatttttacaaattgacGTTTCAGATGAAAatTCATCAAATTGGATGCGTTTTGTGAGATCTGCTCGTACTTATGAAGAGCAAAATTTAGTGATATGTCAACAAAATGAGGGAATTGTATTTTTGTCCACTCGAAACATAATGCCTAAAGAAGAATTGAAAGCCGGTCCAAGTCTTGAATATGGAAAACGTAGAAATTTACCAGTTCttgaaataatatcaaaatgtaGTTTAgTAGAttcaaaaatagaatattgtTCGCAATCTTTCATAAAGGCAAATTCCTTGGATATGGAagatgagaaaataaaaaagagctcattaattgaaaatcgtcGAAACAATTCTACAAGGTCACAACGAAAATGTAAAACTGTTTGTGATTCATTCCAaaaatacttAGAATTTGATGAAGACGAAGATgacgatttaattaattcaaattgtttgaaaagcGATTGTGATCAGTCTTTTGATGTCATTTCAAGTCTTCACCAGGAggaaaaggagaaagaaaattctCCTGATTCCAAATTAGAATTGATGAAGCAAGAAATATCACAGTCTAATCAAGTGGACATTTCAGATGATACTACGAGCTGTGTTTCCTCTAGCGTTTACAAATGTACAGTATGTCCAAAGcgtttttcaacaaaattaaaatttcaacagcACTGCCTGTTACACGGTGTCAAAGACAATGAATCTTTTTCATGCAACATTTgctcaaagaaatttttaaacaattcatcGCTGTCTCGTCATTTGAAAATACATCAAAaagaGCGACAAACACTAGAATGCCCGGTATGCAGAGAAGCATTTGGACGggttttaactttaaaagacTTTCCTGACACGCATCTGAATCAAGATGATGAAACATTTACTTGTCCTCACTGCCCAAAATCATTTACAAGTTATGCTCTGACTCGTAAACATGCCAGAGCTCATCATTTTGATCGGAAGCACGAATGTCAGTTTTGCATGAAATGCTTTCCAGCTGCGGATAAATTGAGAATGCACTTGTTAAAACATTCAGACCGCAGgGAGTTTCAGTGTGCTAACTGCGGAAAacaattcaaaagaaaagataaactGAAAGATCACGTAACTCGAGTACATTATACCCAAAAGACTAACAAGGACCAAATATCATCGAATAATCGTGCCAAAAAGACAATTCCAAAGacaAATGCAGTTGACTGCGACCGTTTCATTTACAAATGTCGTCGATGCCAAGTGGGCTTTAAACGCAGAGGCATGCTGGTTAATCACTTAGCTAAAAGACATCCAGATGTTCCGCCTGACTCTGTACCAGAGCTTAGTTTACCGATTTTAAGGCAGACAAGAGATTATTATTGTCAATATTGCGATAAGGTGTATAAGAGTAGTAGTAAGCGAAAAGCTcacataatgaaaaatcatccTGGTGCAGCCTTGCCGCCGAGTAATAGAAGTAAAGAGTTTGACATTCCTGGTCTGCCTAATCCTACTTTCAGTCAGGCTGCTGGCAGTATCAAAACCGCTCCACAGGGTTGCCAATGGTGCCACAAACAATATGCTAGTAAAGCGAAACTCTTGCAGCATCAACGAAAGAAGCACTCCAGTTTGATGGAGCCCGCGGATCAGATACCGCGCCCGCGATTCCGTCCATCGCAGAATCAAAATCAGCCACCGGCGTCATCGGTGAACGTAGTCGGTTCTAACGGCATGTCCGGCGCAGCTAACGAGTGCGCCAGGTCGGCGACGTCGCGCAATGATCGATCCGAGGATGCGGAGTACCCAAAGGCCCGCATGATTCGGATAAGCGGAGCCGGCGAGCCGGCTCTGGTCATGAACGGCGACTTCGAGCTGCTGGGCGGGCCGCAGTTTGCGCGCGTCCGCGACATGCGCTGA
Protein Sequence: MDQGGPPEGAPVVIADPMDMTIIDKVCSDSNWPDDNIVSSSTFSDHPKKLNKLFFLTVGLVEDQAKDFGRMYPSYEQEVAFSSRANSPLSDFEHRVSSHDPNMSSAARYSPTPVPLPSLPFNNSVVILQEPSSPLISTSESAVRISSDYSTQLTDQSSTPSLSHSENSEDFTDSTSDGLVSSVGNELMLIQGSNSDLEPSSTPLMLSGISGSDLALTRDFLVMQEDQINVINSMKLNSNLDSNINQVTESILPHDLDDENNAQITTVKNFKRFSEDSEHILDSEQKHVHWCKDQTSENNSLWFEDCDSTCTDTADCSLHSVCTIADQPVPSRAVATLPGLYLSIDKLPTSDINGTSPEYGVFAKRNIRHRTQFGPIEGILHPYDGSKIIGLPLLLETKEEGEFLQIDVSDENSSNWMRFVRSARTYEEQNLVICQQNEGIVFLSTRNIMPKEELKAGPSLEYGKRRNLPVLEIISKCSLVDSKIEYCSQSFIKANSLDMEDEKIKKSSLIENRRNNSTRSQRKCKTVCDSFQKYLEFDEDEDDDLINSNCLKSDCDQSFDVISSLHQEEKEKENSPDSKLELMKQEISQSNQVDISDDTTSCVSSSVYKCTVCPKRFSTKLKFQQHCLLHGVKDNESFSCNICSKKFLNNSSLSRHLKIHQKERQTLECPVCREAFGRVLTLKDFPDTHLNQDDETFTCPHCPKSFTSYALTRKHARAHHFDRKHECQFCMKCFPAADKLRMHLLKHSDRREFQCANCGKQFKRKDKLKDHVTRVHYTQKTNKDQISSNNRAKKTIPKTNAVDCDRFIYKCRRCQVGFKRRGMLVNHLAKRHPDVPPDSVPELSLPILRQTRDYYCQYCDKVYKSSSKRKAHIMKNHPGAALPPSNRSKEFDIPGLPNPTFSQAAGSIKTAPQGCQWCHKQYASKAKLLQHQRKKHSSLMEPADQIPRPRFRPSQNQNQPPASSVNVVGSNGMSGAANECARSATSRNDRSEDAEYPKARMIRISGAGEPALVMNGDFELLGGPQFARVRDMR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00713890;
90% Identity: iTF_00713890;
80% Identity: -