Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_900480045.1
Location
UXGC01001249.1:1762-13786[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.4e-91 2.8e-86 289.7 8.5 1 203 515 710 515 713 0.90
2 2 0.03 8.9e+02 0.3 0.5 50 99 887 936 876 948 0.75

Sequence Information

Coding Sequence
ATGGAACCGCCTTCGGCCGCCGGCCATCTGCTCGCCGAGGCCCGGGAGGATTCGAGCTCAGTGGAGGCCATGCTCCGGGAGTCGGAGGTCATCCAGCCAGTGCAGGACGGCTTCGCCTTTCTCGATGACCTGGGCCCGATCACGGCAAGCGACTCGTCGTCAGCGTCATCGCTCCTCGACGTAGAGCGGCTCGACGACAGCGGCCCCCACCTCCTCGACATGGGCAGCTACGCCAGCAAGAGCAACCCCGAGGACGACGTTAGGTTAGACCCTTCCGCAAGTGCTAAAGAAGCCAAGGAACCGACGGCGGTGGCATCGTGCAGCGTCGCACCGAGCGCGCCGTCACCCACGCCGGCGACGCGCCGGCGGTCCACGGCCCTccccggcggcggcagcgccgCCTCCGACTTCCAGCCCATCGGCGTCGAGGTCTCCGAGGAGAAGGCCCAGCAGCTGAAGAACGACGTGCGCCGCCTGTCCCCGGTGCACGTGAGCCCGTGCGAGCGGACCCTCGGCGAGATCTCGCTGTCGTTCGAGTCCGCCGCCCGTGTCGGCCCCGACGCGGACGATCAAGACACTAGTGCCGGTGGTGGTACCGCGAGTGCCGCGAGAAGTGAGGAGGACTCGGGGCCGGGCTCTAAGCCCCACCGCGAGCTCGTGATCCGGCTGTCGCGCGTCGACGGCCAGCCGCAGGTCGCCTCCCCCAGGCCCCCGGACGCCGACCCCCAGCTCGGCGGGCCGATGGAGCAGCCGGAGGCGGGCGGCAAGTCTTCCGGGAGCCTAGGCGCCGGCTCCCCCTGCCCCTTCGGCACCAGCCTCGTCCTGGAGCGCTGCAACGCGCCCGGCTACGCGGAGAACCGCGTGCTCTCGAGCTGCGGCCGCGTCACCCTCCTGGACAAGCTCGACGCGGAGCTGCAGCTCGGGCCGCGCGGCCAGCTCCTGCTGTCCGGCAGCCCCAAGGCCCTCGTCGAGAAGCTGCACATCGGCGACGAGATCGAGTTCTCCAGCCCCGGCAGgtcgtcggcggcggccgcgagcTTCGCCGAGGAGGTGGACACCGAAGCGGCGGGCGCGGAGGCGCTGGCCTCGATGGCCGCTGCGGAGGCCGTAGGCGACGGGGCGCTCAGCCAGGTCGTGCTGACGAGGCTCGAGCAGGACAGGCCCGTGCCCTTCACCGACGACTCCGCCGAGAGCCTGGCGCTggcggcgagcgcgcccgaCGAGGTCCGGTCCGACGGCAGCGACTCCGGCCTCGGCATCGAGATGCCCGGCGACCCCACCTGTCCCGCGCCTGCACCCGAGTCCGACGGCGAGACGTCCTTCCTCGACAGGATACCCGACGATATTCTTTCCGATAAGGATAAATCCGCGAATCCCCTGGAAGACTTCATAGCCACAGACGAGCCGAAGGCGCTGCTGATGCCGCCCCTGGGGCCCCCTGCCAAGAGCAACCTGAAGCGCCGGCTGACGGACTGCATGGAGGACGAGCAGCCCGGCATCAAGAGGCTGAACGTCGAGGGCGCGTCGCCGGGCTCGCCGGGCAAGGAGAAGCGCAAGATACACTTCGACGCCGTCACGGTCTACTACTTTCCCAGGGCCCAAGGCTTCACCTGCGTGCCTTCACAGGGCGGTAGCACGCTGGGCATGGCGGCGGCGCACACTTACGCCGAGCGCTTCTCGCTGTCGGAGCACGCGGCGGAGCAGCGGCGGGCGCACCGGGCCCGGCTGGCCCAGATGCGCTCGGAGCGCGCGGCCAACAGCTCGACCGAGGCGGCCTCCTCCTCGGAGGACCCGTCCGACGACACGGACGAGGAGCCGAGCGACACCGAGGAGGTCGACATCGACAGCTACTACTTCCTGCAGCCGGTGCCCACCTGGCAGAGGCGGGTGCTCCTACGGGCGGCGGGCGTGCGCAGGATAGACGCCGTGGAGAAGGACGAGTGCCGGGACATCAGGGCCAGCAGGGAGCACTGCGGGTGCGCCTGCAAGGGCTACTGCGACCCCGAGAGCTGTCCCTGCAGCCGGGCTAACGTCAAGTGCCAGGTCGACCGTCAAGGCTTCCCGTGCGGCTGTTCCCGCGACGGCTGCGCCAACAGTTCCGGCCGCATCGAGTTCAACCCCGTCCGCACGTCGAGCGGCGACTGCCTCGGCGGCGGCTTCACCGGCCTCCACTACGACAGCCCGGACGGCACGCGCGCCGACAGCCTGGATCTCTACGCGATGAGGGACGACTGCTATCCGGGCGACGACTGCCTCGGCGACCCCGGCCAGGGCCAGCAGCAGCGCAAGCTCCACAACGAGTTCGGTCAGAGCTTTCAGCACTACGGCAACCCCGGGCCCAGCATCTCCTTTCAGCAGAACCCCTACGCTGACTATCAGACTTATCAGAATCTGCCCTCAACCTCGAGGTCGCCCTTTCAGCCGCAGTTTCAGTCGGTCGGGGCAAATCAGGGCTTCTCGCACTACGGCTCGTACTCGCAGGAGTCAAGCGCCGCCTCGAGCGGCGACTGCCAGCAGGCGCCATTCGCCCAGGACGAAGTGACGGGCTCGCAGTACACGAATCTGAACTCGATACAGCCGATGAGCTCTGTCGCCCAGCAGATCGGCAAGCTCGAGCCCTTCTCCGAGCTGCTCTCCGCCCGGTACTCCTACTACGGCGACATGGTCGAGCAGCAGCAGAGCCACCACCAGTCGGAGCAGCAGCACCACGGCGCCTACCACGAGAACGGCGTCAAGCTCGACATGGGCAAGGACGGGCTGGCCGTCAACGAGCAGCAGGAGCAGCTGCCCGAGGAAGACTGCGACGAGAATTTCGGCgagatcattaaaaaatccatggTCGAGACTGTGTCCGCTTAA
Protein Sequence
MEPPSAAGHLLAEAREDSSSVEAMLRESEVIQPVQDGFAFLDDLGPITASDSSSASSLLDVERLDDSGPHLLDMGSYASKSNPEDDVRLDPSASAKEAKEPTAVASCSVAPSAPSPTPATRRRSTALPGGGSAASDFQPIGVEVSEEKAQQLKNDVRRLSPVHVSPCERTLGEISLSFESAARVGPDADDQDTSAGGGTASAARSEEDSGPGSKPHRELVIRLSRVDGQPQVASPRPPDADPQLGGPMEQPEAGGKSSGSLGAGSPCPFGTSLVLERCNAPGYAENRVLSSCGRVTLLDKLDAELQLGPRGQLLLSGSPKALVEKLHIGDEIEFSSPGRSSAAAASFAEEVDTEAAGAEALASMAAAEAVGDGALSQVVLTRLEQDRPVPFTDDSAESLALAASAPDEVRSDGSDSGLGIEMPGDPTCPAPAPESDGETSFLDRIPDDILSDKDKSANPLEDFIATDEPKALLMPPLGPPAKSNLKRRLTDCMEDEQPGIKRLNVEGASPGSPGKEKRKIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMAAAHTYAERFSLSEHAAEQRRAHRARLAQMRSERAANSSTEAASSSEDPSDDTDEEPSDTEEVDIDSYYFLQPVPTWQRRVLLRAAGVRRIDAVEKDECRDIRASREHCGCACKGYCDPESCPCSRANVKCQVDRQGFPCGCSRDGCANSSGRIEFNPVRTSSGDCLGGGFTGLHYDSPDGTRADSLDLYAMRDDCYPGDDCLGDPGQGQQQRKLHNEFGQSFQHYGNPGPSISFQQNPYADYQTYQNLPSTSRSPFQPQFQSVGANQGFSHYGSYSQESSAASSGDCQQAPFAQDEVTGSQYTNLNSIQPMSSVAQQIGKLEPFSELLSARYSYYGDMVEQQQSHHQSEQQHHGAYHENGVKLDMGKDGLAVNEQQEQLPEEDCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00714374;
90% Identity
-
80% Identity
-