Basic Information

Gene Symbol
snpc-4_1
Assembly
GCA_900480045.1
Location
UXGC01000057.1:433434-436311[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.15 2.5e+02 2.6 0.1 22 39 232 251 220 255 0.77
2 5 3.3e-12 5.5e-09 36.7 0.7 1 44 264 309 264 311 0.96
3 5 4.6e-09 7.6e-06 26.7 0.1 2 44 319 365 318 367 0.96
4 5 2.1e-12 3.5e-09 37.3 0.0 1 45 373 418 373 419 0.92
5 5 2.5e-09 4.1e-06 27.5 0.2 1 32 426 457 426 467 0.91

Sequence Information

Coding Sequence
ATGAGTGACGATGAAGATAACCAAACTTTAATAGATGAAATTAGAGCTTTGGAAGTTGCATtggaacaaaagaaaactagTACAAACAATGTTGCTTCGACCAGCAGCGTTTCAAAAAGTGAGTTGTTACCAAAATTCATTGCAAAAacagaaagagaagaaaatttatgtgaaAACTATAGAGATGAAGAGGATGATTTTGTTGCCGATGATTGTTACGATTGCAGAGATTTACAagatttattagaatttaataaaaaattaattgaatcaatTTTGGAAACACGTGATAAAATGGTTATTTTGCTTGAAGAATGcaagaaaaaacaaagtttgcTTGAAAATGATATTACTAAGAAGTACAATAATACTTGCAGTAAGATAGTAACTTTTAATGCAGGAATGccttattttaaagataaaaattattttacggcTCCAAGAAATGAAGATACAGAAACTAAAATCAACAGAGGTGAATTATGCATGACTCAACTTCAACGTATTCATCGATGGAGTCAGAtcgataaaattcatttattaacagCTATAAGACATGAAGTAACTTTAActcttttgaataaaaatgaaaacactGATAATATTGGTAGTACAATTGGTTCAATTACCAAATCAAGTCAATTATCATatgatatgaaaaaagcaattgGATCCTTAGGTgcaatgaaatttgattggttaaaaATAGCTAGTAATATTCCTGACAACAAACACAGCGCACAAGAATGTGAAGTCAtgtggaacatttttttacatcctgatattaataaacaaaaatggacaccaaaagaagataaaaatttaaatcgtatAGTTGAAGAACACGATTGTGAAGATTGGGATTCAATTGCCaatgaattaaatacaaaacgTAGCGGCTATCAATGTTTTGTTAGATATAATACAAACAATTGGAAAAACCTGATGAAAGGCCAATCTTGGACACCATCAGATGATGAAACACTTACGAATTTAGttcaaaaacttaaaattggTGATTACATTCCTTGGGGATATATTGCCAGTTGCATGAATAATTGGACAAAACAACagGTATATTTTCGATGGAATTACAGTTTGGCAccacatttaaaaaagggaagaTTTTCAGAAGAGgaagataaaatattgttagaTGCTGTAAAAACACATGGACTGAATTTTGGCAAAATATCTGCTCTAGTAATGACTCACAGAACAAATGTTCAATTAAAGGAACATTatcaaactataaaattaagagAGAAACAATCTAAAAAAGTATGGACTATAGAAGAAGATGCTAAATTAatagaacttaaaaaaaaatatggtacAAATTGggttaaaattgtaaaagaaatgcCGAATCCAAATGTAACAAGAATTCAAGCTAGGCAGCGACATTCTGCACTTATTCGTTTTGAAGAAAGAGGAATTACATTAGAAAAAATCaacagaaatttaaatttggatAATCAATTGTCAACTCACACAACagttatttatacaaataacaCTCCTTGGTCACGTGAATGTAAAGAAATTCATGTAAAACATCTAAAGATTGATGATCagcttataaatttttttaagagagaaaGTAAACTTAAGAAGTTAgaacaaaaaggaaaagcatATTCTcccgataaattaaaagaagatacTAAGAAGCTGTACAATAGGttgttgaattttaaagcGAATTTAAATATACCAGAATGTATTGATGATAGTGCTGATTTAAATGAATCTCATTTGCAGCTGATAATAGCATTGCATGAATTCACTGAGGCAAAAAGACGAAATGCTGATGAAGAAATAGAGCGATTTAGAGAAGAGATGTTTGGCCCTCTAACTTTAGGATCAAAAACATTCATTCCACCCCTACCATTTGGATTTCGCATTCCAAGGTCTAAAAAGAACATTACAGATACAATAAATTCTAACTTTAGTACCAATGAATATCATCAAATTGATTTACCTGAAACACTAGAACCAGATAAATTAGTAACTGAGTGTTTAaatgaagatactgaaaaacagtttgaaaaattcaaaaacttaaTGACAAGAAGCTGTAAGGAAATGagctttgataaaaattatttgagatgCAAGCCATTTGCACACTCatcattttttgaagaaatacaAGAAATCAACAATCAGCAACatAATGTACTTAAAAATCCAGAAAATAAGCAGCAAATGAAATATGATTGGGAATTAAATAGgataatttccaataatttgcCAAGAGAAGAATCCTTTGTAGAAAATGTACCAGTTCAAACTATAGAACCAAATAGAACGACCCTTCAAGGATATCAAGAGATTTTATTAACCTCTGATACTTTTCCTGCAACTGTTGTTGAAACGATTGCAAATAACAAACTTACTTTAAGAGGTCAAcaagctttaaatttatttaaaatgcgtTATCAACAATTGTTTCACATGCCAGCAGGATTATCTAGGATAATACCACCAGATATTGTTGATGAAAGTGCATTTTTACCAGTGcttgaaaaactgaaaaagaaaaacttaaaaagaaagcGCTTAAACTAA
Protein Sequence
MSDDEDNQTLIDEIRALEVALEQKKTSTNNVASTSSVSKSELLPKFIAKTEREENLCENYRDEEDDFVADDCYDCRDLQDLLEFNKKLIESILETRDKMVILLEECKKKQSLLENDITKKYNNTCSKIVTFNAGMPYFKDKNYFTAPRNEDTETKINRGELCMTQLQRIHRWSQIDKIHLLTAIRHEVTLTLLNKNENTDNIGSTIGSITKSSQLSYDMKKAIGSLGAMKFDWLKIASNIPDNKHSAQECEVMWNIFLHPDINKQKWTPKEDKNLNRIVEEHDCEDWDSIANELNTKRSGYQCFVRYNTNNWKNLMKGQSWTPSDDETLTNLVQKLKIGDYIPWGYIASCMNNWTKQQVYFRWNYSLAPHLKKGRFSEEEDKILLDAVKTHGLNFGKISALVMTHRTNVQLKEHYQTIKLREKQSKKVWTIEEDAKLIELKKKYGTNWVKIVKEMPNPNVTRIQARQRHSALIRFEERGITLEKINRNLNLDNQLSTHTTVIYTNNTPWSRECKEIHVKHLKIDDQLINFFKRESKLKKLEQKGKAYSPDKLKEDTKKLYNRLLNFKANLNIPECIDDSADLNESHLQLIIALHEFTEAKRRNADEEIERFREEMFGPLTLGSKTFIPPLPFGFRIPRSKKNITDTINSNFSTNEYHQIDLPETLEPDKLVTECLNEDTEKQFEKFKNLMTRSCKEMSFDKNYLRCKPFAHSSFFEEIQEINNQQHNVLKNPENKQQMKYDWELNRIISNNLPREESFVENVPVQTIEPNRTTLQGYQEILLTSDTFPATVVETIANNKLTLRGQQALNLFKMRYQQLFHMPAGLSRIIPPDIVDESAFLPVLEKLKKKNLKRKRLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-