Eocc036656.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465507.1:6427779-6436263[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00023 0.025 16.2 0.7 1 23 70 93 70 93 0.91 2 18 5.9e-05 0.0063 18.1 0.5 2 23 117 139 116 139 0.97 3 18 0.2 21 7.0 3.2 1 23 160 182 160 182 0.96 4 18 0.081 8.5 8.2 1.7 1 23 186 208 186 208 0.97 5 18 0.0029 0.31 12.7 1.8 1 23 213 236 213 236 0.97 6 18 0.054 5.6 8.8 1.8 2 23 244 266 243 266 0.92 7 18 0.00029 0.031 15.9 1.5 2 23 274 296 273 296 0.96 8 18 0.00055 0.058 15.0 2.5 1 23 302 324 302 324 0.98 9 18 8e-05 0.0084 17.7 6.9 1 23 330 352 330 352 0.99 10 18 0.84 88 5.0 0.4 1 23 464 487 464 487 0.90 11 18 0.0074 0.78 11.5 0.1 2 23 513 535 512 535 0.97 12 18 0.025 2.6 9.8 3.6 1 23 648 671 648 671 0.92 13 18 0.26 27 6.6 0.2 2 23 698 720 697 720 0.95 14 18 7.3 7.6e+02 2.1 0.3 2 23 743 764 742 764 0.93 15 18 0.00043 0.045 15.4 0.4 1 23 768 790 768 790 0.97 16 18 0.0087 0.92 11.2 2.2 1 23 795 818 795 818 0.97 17 18 0.044 4.6 9.0 0.8 2 21 826 845 826 848 0.88 18 18 0.00078 0.082 14.5 4.8 1 23 854 876 854 876 0.97
Sequence Information
- Coding Sequence
- ATGTTGCGCTTTCGTGTGATCTATCAACGTGAACAACGGAACACACCATTAAAAGAAGATAATTTAAATACAGGGGAACCTATACTGAAAATTGAATCAATTCCTGAAAAATCTCTGAGAAAAGAAACAAAGAGAAGATCTGACGATTTAAAAACGATACTTCTGTATTCTAATGCAAGTTTAATCAGAAATAAAGATAGTAACGGATACTCCTGTAATTTTTGCCCCAAGAAATTTGAAGACCCCAAAAAATTAAAGGCTCATTCTTTAGAAGAACATTCCGATATACAAGCTTTACGAATGCCAAAATCTTTTGAATACCTTATCAAAGTTGACataacagatttaaaatgcaaaaTTTGCCAGAAAAACCTTTCGAATTTAGATGATTTAACGGTACATTTAAAAACTGATCACAGTCAAAAGATTACTACCAACATGAGCGAAATTATTCCTTTCAAATTCGATTCTGAGGAGTTCCATTGCGCTATATGTGGTACGGAATACTCGACGTTTAAAATATTGCAAGAGCATATGCATTATCATTTTAGGAACTACATTTGTCAAGTCTGCAATGCAGGGTTCATTACAAGGCGTTTGCTAATCTGCCATAAAAGAAGACACGCAAAAGGAGAATTTCAATGTAGTCAATGCGATAAAACTTTCATTTCCGATCAAAAGAGAAGAGACCACATACAGAGAATGCATTTGGGAATGAAGAAGAGAAACAAATGCAAAGTTTGCGGGGAAAAATTCGAAGACTACTGGACGAAAATGCATCACATGGTCCAGAAGCATGGAGCTCCTCCTATATCTTTAAAATGTACTGCCTGCGAACGAATATTCACAAATCGACGATCGTTGACAAGACACGTGAAAAAGGATCACTTGTTGGAAAGACAACATGTCTGTACCATTTGCGATATGCAGTTTTTCTTGAAGCATCTCTTAGAAGAACATATGCGGGTACATACTGGGATCAAGAAGTTCCAATGTCATGTTTGTACGAAACACTATGCGACTAAAAAGTCGTTGCGTCAGCATTTGCGATCGCATGCTGATGATCGTCGGTTCGGTTGCACTGTGTGCAGTCTAGCTTTTGTGCAGAAACGTCTTCGCTCCAGGACTATTCGCCAATCACCAATTATCTTCGAAGaccaagaagaagaagaagaaaaatccATCACTTTGGACAGGAAACTGAACTTctcttctttcgtatcgatcCGCCCAGTGGGCAAAAATACAACAATACCTTGGGTCCGTGAGCAGCAGAAGAAAATTGCCCAAGAAAGACGTTTAACGGAACTCGACTGGCAATTTGACAACATTAAGACTATTCTCAAATTCTCCAACTCTTCGCCAGTTCGCTGTCGAGTCGGGTCCAGATTTGCTTGCAGCTACTGCCTCGACCAATTCCAAAACCCGACGGAATTGAGAAACCATTCTTTACAAGTCCACGTCAATGATAAACCAGAATTCTTCAACGCTAGATCTTTGTCCAGACATATCGTGTATTTAGACATTACTGGTTTGAAATGTAAGATTTGTGATCAGTCTATAGATGGTCTGGAGCAGTTGATGGACCATTTGAAGACTGTTCACGGTGAGTTGATTTATAAACAGATTAAGAATCAAATCATTCCGTTTAAGTACGATGGTCGGAAGCTTCTATGCGGAGTTTGTGCAGCTGACATAGGAGAGTACAATGACTTCCAAGATCATATGTCTGAACATTATAGAAACTATATTTGCGgtaccgaTCCAGAATCCATACTGATCGAGATAGAAGTCGACACATCATCATTTTTTTATGCTTCTGATGGCGAAGAAGAAGCTGAAGTCTCCACGCTCAACGAAGTCGATAAACACAGAGAGAACATCCGAACCATCCTGCTTTCCTCCAACGCCACGCCGATAGGGAGATACGGGACCCACGGATACAACTGCTGCTATTGCACGGAAGTCTACTCAGCCCCTAGACATCTGAAGAAGCACACAATCGATCAACACGACGAAGAAAACATCTCCTCCTTTATGAAAAACTATACTATGCTTAACTACATCGTCAAACTAGACATAACTGGACTTCGCTGCGAAATGTGTATGAAGCCGTTCAATGAACTGAAACGATTAATTGACCATCTCAAGATAGATCACCAGAAATTTTTTCACACCGACATTGGTAGCCACATTGTCCCTTTCCGGTTCGATTCAGATGTACTGCGCTGCGTCGAATGCGCATTCGAATacaataatttcaagattttacTCGAACACATGAATTCTCATTACAGCAATCATGTTTGCGACGTATGTGAAGCTGGCTTCGTTAACAGAAGGATGTTGCAGGCCCACATGTATCGACACAAAACTGGGATCTTCCATTGTGGTTTTTGCACAAAAGTTTTTGACACTCGTATCAAGATGAAAGTGCACGAACGAATGGTACACTTGTACGTCAAGAAAAGACCAAAGTGTACCATTTGtgagaagaaatttaataattttcagAAGATGATACAGCATGAGGCTGATGAGCACGGTCTTCAGAGAGAGTTTAAGTGCGAGATGTGTAGTAGAATGTTTACTACTAAAAGGTCTTTTACAGttcataaaaagtttcactGTGTTCCTAATGATTAG
- Protein Sequence
- MLRFRVIYQREQRNTPLKEDNLNTGEPILKIESIPEKSLRKETKRRSDDLKTILLYSNASLIRNKDSNGYSCNFCPKKFEDPKKLKAHSLEEHSDIQALRMPKSFEYLIKVDITDLKCKICQKNLSNLDDLTVHLKTDHSQKITTNMSEIIPFKFDSEEFHCAICGTEYSTFKILQEHMHYHFRNYICQVCNAGFITRRLLICHKRRHAKGEFQCSQCDKTFISDQKRRDHIQRMHLGMKKRNKCKVCGEKFEDYWTKMHHMVQKHGAPPISLKCTACERIFTNRRSLTRHVKKDHLLERQHVCTICDMQFFLKHLLEEHMRVHTGIKKFQCHVCTKHYATKKSLRQHLRSHADDRRFGCTVCSLAFVQKRLRSRTIRQSPIIFEDQEEEEEKSITLDRKLNFSSFVSIRPVGKNTTIPWVREQQKKIAQERRLTELDWQFDNIKTILKFSNSSPVRCRVGSRFACSYCLDQFQNPTELRNHSLQVHVNDKPEFFNARSLSRHIVYLDITGLKCKICDQSIDGLEQLMDHLKTVHGELIYKQIKNQIIPFKYDGRKLLCGVCAADIGEYNDFQDHMSEHYRNYICGTDPESILIEIEVDTSSFFYASDGEEEAEVSTLNEVDKHRENIRTILLSSNATPIGRYGTHGYNCCYCTEVYSAPRHLKKHTIDQHDEENISSFMKNYTMLNYIVKLDITGLRCEMCMKPFNELKRLIDHLKIDHQKFFHTDIGSHIVPFRFDSDVLRCVECAFEYNNFKILLEHMNSHYSNHVCDVCEAGFVNRRMLQAHMYRHKTGIFHCGFCTKVFDTRIKMKVHERMVHLYVKKRPKCTICEKKFNNFQKMIQHEADEHGLQREFKCEMCSRMFTTKRSFTVHKKFHCVPND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01085710;
- 90% Identity
- -
- 80% Identity
- -