Basic Information

Insect: Eurois occulta
Gene Symbol: -
Assembly: GCA_950022335.1
Location: OX465492.1:4531252-4547019[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0022 0.24 13.1 2.6 3 23 241 261 239 261 0.97

2 11 0.17 18 7.2 10.4 1 23 267 289 267 289 0.96

3 11 4.8e-05 0.0051 18.3 5.8 1 23 295 317 295 317 0.98

4 11 0.00043 0.046 15.3 1.5 1 23 323 345 323 345 0.97

5 11 9e-06 0.00095 20.6 0.9 1 23 351 373 351 373 0.97

6 11 2e-06 0.00021 22.7 0.1 1 23 379 401 379 401 0.98

7 11 7e-05 0.0074 17.8 0.4 1 23 406 428 406 428 0.96

8 11 0.67 70 5.3 3.6 3 19 436 452 435 458 0.90

9 11 3.4e-05 0.0036 18.8 0.4 1 23 562 584 562 584 0.97

10 11 8.9e-05 0.0094 17.5 1.4 1 23 652 674 652 674 0.96

11 11 3.7e-05 0.0039 18.7 4.3 1 23 684 706 684 706 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0022	0.24	13.1	2.6	3	23	241	261	239	261	0.97
2	11	0.17	18	7.2	10.4	1	23	267	289	267	289	0.96
3	11	4.8e-05	0.0051	18.3	5.8	1	23	295	317	295	317	0.98
4	11	0.00043	0.046	15.3	1.5	1	23	323	345	323	345	0.97
5	11	9e-06	0.00095	20.6	0.9	1	23	351	373	351	373	0.97
6	11	2e-06	0.00021	22.7	0.1	1	23	379	401	379	401	0.98
7	11	7e-05	0.0074	17.8	0.4	1	23	406	428	406	428	0.96
8	11	0.67	70	5.3	3.6	3	19	436	452	435	458	0.90
9	11	3.4e-05	0.0036	18.8	0.4	1	23	562	584	562	584	0.97
10	11	8.9e-05	0.0094	17.5	1.4	1	23	652	674	652	674	0.96
11	11	3.7e-05	0.0039	18.7	4.3	1	23	684	706	684	706	0.97

Sequence Information

Coding Sequence: atgtgtATGCCAACTCCTAACAATGTTTCGGGCTTCGGTTACTCGTGGGGCTTCACGAGTTCTGCAGACCTTACGAAGGGCGAAGTGGAAACACCGAGTAGTCTGAGCTATACTTTGGGCAATACGGTTTCCCCAGAAACAACACTGACTGTTATGTCCCACAAGACACCACAAGTACAAGAAAAAGCAGGTGCCGTCACAGTAGCAGTATCAAATGCAGGTGCACAACTTACCAGGGTGGTAACTACAGGCACACCAGTCTCGGGAAGACGGATGTTTGTGGTGAACGATGCCACAGCCCATACATTGAACAGGGTAACACAGCAGAATCAAACAACTACCATACATACGAACTTAGCAGCTAAGCCGTTTATGACACCGATAGGTCCTATCCAGCTAACGGCGGAAGAATGCAACGAGATATTGATGAAGAGGGCTCTTCAGGCCCAAGGCATCGCAACCCCGGTCATAGATGCGTCGCAACTGAACCATTCGTTATTAAATGGGAGCCTGAAGAGTCTAGCTGAAGCGACTCAGCAAACGCAGGCCGAGACGATTCAGACCACGACAGTACATCAGCATCATTTGTTACATGCAAAGCAAGAGCCTGGGACTACTAATAATTCGCCTAAAACTGTATATTCGCAGACGGAGCTGATGAACACGAACTCGGTGATGACGACAGCGCCGCCCGCTGCGGTGAAGGAGCGCCCTTACGGCTGCGACGAGTGTGGCAAGTCGTTCCTGCTCAAACACCATCTCACGACGCATGCGAGAGTTCATACAGGTGAGCGACCGCACTCGTGCGTTCACTGCGCCAAGACATTCGCGCACAAGCATTGCCTCAACACCCACCTCTTACTGCACTCTTCTAACCGTCCGTACCGCTGCCCCGAGTGCAAGAAAACCTTCACGCTCAAACACCACCTACTCACACACTCAAGgGTGCACAGTCGAGAACGTCCGTTCGTTTGCAATGAGTGCGGGCGCGGGTTCCCTCTCAAGCGCCACCTGGTGACGCACAGCAAGTACCACGCGGGCGAGCGGCCCTACGTCTGCAGCGATTGTGGAGAGAGCTTCGCTCAGAAGGAGCACCTAGTAATGCATAGTCGTTTCCACGGCTCCCTCTCACCCTACGTTTGTCCAGACTGCGGCGTGACGTTTGCGCGCAAGTTCCAGCTCGTGAACCACGGGCGAGTGCACGGTCGAGTCCCTCACGCGTGTCCCGTGTGCGGCAAGGAGTTCCTACAGAAGAGGACACTCGTCGCGCATATGAAAATCCACACAGGGGAAGGTGCAGTCGCGTGCTTGGAATGTGGTGAAGCCTTCAAATGCAAGTCAGAGTTGCAGCAACACTGTAAAATGACGAGGCACTGTCTACAATCGACGCAATCtcaacagcaacaacaacagcagcagcagcaacaacaacaacaacaacaacaacagcagcaacaacaacaacagCAACAAGCACAACAACAAGCTCAGCAACAGGCGCAGCAACAAGCACAGCAACAAGCCCAGCAGCagcaacaacagcaacaacaacaacagcaacaacagcagcagcaacaacaacagcaacaagcAACTGTGATAAAACAAGATGAATTTAAACCGCAAATTGTACAGGTTATTGGTGCGGACGGTCAAATAGTGTCAGAAAAAGCGACGCCGGGATACGCGTGTCCAGAGTGTGGTTCCTGTTTCAACACGAAGGAGGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACGGACCTGTGCGCGCTCACGGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCGCAGCATAGTTTCATTATTCCAGATCAGCCTAATATACAGATAATTTCGTCGAACTCTAACAACGTTGGCCATACGCAAGTTATAGCAGCGAATCATCAAATAACGACACCTAGACCGAAGGTTCACTTTTGTGGCGACTGCGGGAAAGGATTCGCGGCTAAACATGGTCTGTTGGCGCATCAAAGAAGACATCCGGACGGCAGCTGTACACTGCGCACGCACGTGTGCGACCAGTGCGGCAAGGCGTTCTTCCAGAAGAACCACCTCATGCTGCACCAGAGACAACACATGGACCTGCCGCCCCGCAGTAGCCAAGTGCAACCTGTAACGCAACAAGCCGCGCAACAGGCAGCGCAACAGGCGGCGCAACAAGCGCAGGTGCAACAACAAGTGCAACAGCAGGTGCAACAACAGCAGCAACACCAGCAACAGGTGCAACATCAGAACAGTCTGGAGTTGGAGCAACAGGAACATCAGGCCACGCATATACAAGTTGTAAGTACAGTAACGAAGTTCGTATAA
Protein Sequence: MCMPTPNNVSGFGYSWGFTSSADLTKGEVETPSSLSYTLGNTVSPETTLTVMSHKTPQVQEKAGAVTVAVSNAGAQLTRVVTTGTPVSGRRMFVVNDATAHTLNRVTQQNQTTTIHTNLAAKPFMTPIGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHSLLNGSLKSLAEATQQTQAETIQTTTVHQHHLLHAKQEPGTTNNSPKTVYSQTELMNTNSVMTTAPPAAVKERPYGCDECGKSFLLKHHLTTHARVHTGERPHSCVHCAKTFAHKHCLNTHLLLHSSNRPYRCPECKKTFTLKHHLLTHSRVHSRERPFVCNECGRGFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKEHLVMHSRFHGSLSPYVCPDCGVTFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGAVACLECGEAFKCKSELQQHCKMTRHCLQSTQSQQQQQQQQQQQQQQQQQQQQQQQQQQAQQQAQQQAQQQAQQQAQQQQQQQQQQQQQQQQQQQQQQATVIKQDEFKPQIVQVIGADGQIVSEKATPGYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAHSQHSFIIPDQPNIQIISSNSNNVGHTQVIAANHQITTPRPKVHFCGDCGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLPPRSSQVQPVTQQAAQQAAQQAAQQAQVQQQVQQQVQQQQQHQQQVQHQNSLELEQQEHQATHIQVVSTVTKFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01063076;
90% Identity: iTF_01062106;
80% Identity: -