Eocc036694.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465507.1:6831367-6838174[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.61 64 5.4 0.3 1 23 157 180 157 180 0.89 2 22 0.071 7.5 8.4 0.2 2 23 206 228 205 228 0.95 3 22 0.0062 0.65 11.7 0.7 2 23 251 272 250 272 0.96 4 22 0.0019 0.2 13.4 0.9 1 23 276 298 276 298 0.96 5 22 0.0022 0.23 13.2 1.3 1 23 303 326 303 326 0.96 6 22 0.043 4.5 9.1 0.5 2 23 334 356 334 356 0.91 7 22 0.0025 0.27 12.9 5.2 1 23 363 386 363 386 0.97 8 22 0.00064 0.067 14.8 2.4 1 23 392 414 392 414 0.97 9 22 0.00014 0.014 16.9 3.4 1 23 420 442 420 442 0.98 10 22 5.9e-05 0.0062 18.1 0.7 1 21 448 468 448 469 0.97 11 22 0.02 2.1 10.1 0.8 1 23 544 567 544 567 0.97 12 22 1.1 1.2e+02 4.6 0.1 2 23 593 615 592 615 0.95 13 22 0.25 26 6.7 1.4 2 23 638 659 637 659 0.95 14 22 5.8e-05 0.0061 18.1 2.8 1 23 663 685 663 685 0.97 15 22 0.014 1.5 10.6 0.5 1 23 690 713 690 713 0.97 16 22 1.6 1.7e+02 4.1 0.3 2 23 721 743 721 743 0.85 17 22 0.0017 0.18 13.5 1.3 1 23 750 773 750 773 0.96 18 22 0.5 53 5.7 0.2 1 15 779 793 779 796 0.85 19 22 0.072 7.6 8.4 0.4 1 23 823 849 823 849 0.88 20 22 0.0035 0.36 12.5 1.0 2 23 878 900 877 900 0.96 21 22 6.7e-06 0.00071 21.0 1.6 1 23 906 928 906 928 0.98 22 22 0.00045 0.047 15.3 1.6 1 23 934 956 934 956 0.98
Sequence Information
- Coding Sequence
- ATGTGGAAATCAATGTATGAATTTCTTGTTGTAGATGTCCTGATTGACAATACAACGAAATCCAAATTGGAAAGATCTAAAAAGAAACCGACGAAAAAACCTaccatttttaaaaccaaagcgTCCTTTTTggatggaaaaacaaaaaaacttatcgagctgaataaattaaaagcaaaaagttttaaaaatgagGTTATAGCCACAAAAGACGATGAAATAAATAAGGAAACAAACGTAATTGCCATAGAGATTAATATGGAGACTAAGATAGAAGAAATGGAAGAACCTGTGAACGCAGACCAAGTCAGGACCCGATACAAGGCTATAGTCAACGACAAATTCAAGAAAGAGAACAGAGAACCTGAAAAATTCGAAGTCAAcgaaatgaataaacataaaGACAATATAAGGACTATATTACAAAATTCTAACGCGACAGTCATCAAAGGATTTTGGGGAACCGGTTATTCTTGCAACTTTTGCGACGAACAGAGAGAAATTCCTTCAGAATTGAAGCAGCATAACTTAGAAACCCATAGTCATGTTGGAGACGATGCTATCAAAGTAAAATACGTATCAGATTTAGTTATAAGACTAGATATTACAGATCTCAAATGCAAACTATGCAACGCAAGTATAAATTCTTTAGAAGACTTTACGGCACATCTAACTAAAATACACTCGTCATTAATACACACAGATATTAAAAACCATATAATTCCGTTCAAATTCAATACAGAAAACTTGCAATGCGCTATATGTAAAAaggaatacaagtattttaagtTGCTTTCCGAACACATGAGCGAGCATTACCGGAACTACGAATGCTCGGTTTGCGAGCGTGcattcataaataaacaatctATGCAAACCCATAGTTATAGACATAACAAAGGTGTTTTCAAATGCTCCCATTGCCCGAAAGTTTTCGACTCTCGCCCGAAAAGAAGCGTACATGAGAGAGTAGTTCATGCTCTGTCCAACAAGACGCGAAAATGTTCCTTCTGTAGCGAAAGATTTGCGACTAAAGACTTAGTACAGAGCCATGAGGTTAAAGCACACGGCGTTAAACCTACAGTATTTTCCTGCCAAGCTTGTAACAAGTCTTACCATAGTCAGAGTTCGCTGACGACTCATAGAAAACGCTACCACCTAATGTTAAGACCTCACAAGTGTTCCTACTGCGACATGGCGTTTTTCTCCAAAATTGAACTGCGCTCGCATACGGTTACTCATACAAAATCAAGAGATTTTAAGTGTGATATGTGCACCAAGTCATTCGGGACCCGGTGTAGTCTCAATCAGCATGTTAGGGGACATTTAGACGACAGAAGGTTTAAGTGTGATGACTGTGAAAGAACGTTTGTTCACCGGACCGCTTGGAAAGTTCATATGAGGAATGCCCAACGGAATATAAAGGTTACAGAGAATGAAAATGCCAAAGAAAAAAGCAACGTACAGACCCCCAAAGCCCCGAAGATTAAATTGACACATGCCGAAGATGACAAAGATATGAGCAGCTTACAGAAAAACAAGAATCTTGTGGCAAATTTCAAAGCGACCGTTCGTTCTATCCTAAAATACACGAATGCCACACCAGTCCGAGGTTACTGGGGAATCGGATATGCGTGCACGTACTGCAATTACCAAACCGCTGCAGCTACTGAACTAAAACACCACACATTAACGATACATTCCAAAAATGACAACGAACTTGAGAACTTGAAATATGCCTCGGATATGATCATTAAACTAGATATCACAACCCTCAAATGCGAGATATGTGACAGTAAAATAGATTCTCTTAACGAAATTATGAATCATATCAAAGTAATTCACAGACAACCTATGCATTTAGACATCTCAAATCATATTGTTCCTTTTAACTTTGAAAATGAGGCTCTAACTTGTGCTCTTTGTCCCTCACAGTTTAATTATTTCAAGCATTTATCCGAGCACATGACTGAACATTTCCCAAACTATGCTTGCAAAGAATGCAATAGATGCTTTATCAACCAACGTTCTTTAAGAATGCACGCAATGAGACATTTGACAGGGACGTTCGTCTGCGCCTTTTGCTCCAAAATCTTCGACACCCGAATCAAAATGAAGGAACACGAAAGAGTTTTACACCTAAAAAATTCTAAGACTCGTAAATGTGGGTACTGTGAAGAAAGATTCATGGATCCTGTAAAAAAAACTGATCATGAAGTAAAAGAACACGGTGCTCCCGTTCGTAAATACGCTTGTGCAGAATGCGCGAAGTGTTTCGATAGTCAACGCGCTGTCAAAAACCATATGAATCAATTTCACTTGCAGCTTAGACCGCACAAATGCTCGGAATGTGGCAAAGGCGCCGAACAAAGCTCCAACCGTGAGAAGATGTACCAACTCCTAAAAGAAATCAAAGCGATCCTAACATTCACAAACGCTACCCCATACAAATCCAAAAACATTCGGTACTACTGTGCATACTGTTCCACCGACGGACCTCACTTCGAGGACCCTGACGACCTCCGGACACATACACGGACAGAACACATGGGACACCGGACAGAGAAGATCGAATACGCCATGCGTCCTTACTGGATGAACGAGAACCATTCTGAGAAAGTCAAAACTATAACATGCGAATTTTGCGGGGAAACTTTCACATGGAAGCAGTACTATATGAATCACATTCGCAAGAAGCATCAGAATAAAAGGCCTTACGAATGTAGCAAatgtgacaagaaattttacgGCAATTATGAGCTTAAAGAACATATGTTAAGACATGTGGGGGCTAAGAATTTTGAATGTACTATTTGTCTTAAGAAGTATGTGTCTATGAATTCGTTGAAGCAGCATATGAAACAGCATAAAAAGAAGAAAGAGGCATGA
- Protein Sequence
- MWKSMYEFLVVDVLIDNTTKSKLERSKKKPTKKPTIFKTKASFLDGKTKKLIELNKLKAKSFKNEVIATKDDEINKETNVIAIEINMETKIEEMEEPVNADQVRTRYKAIVNDKFKKENREPEKFEVNEMNKHKDNIRTILQNSNATVIKGFWGTGYSCNFCDEQREIPSELKQHNLETHSHVGDDAIKVKYVSDLVIRLDITDLKCKLCNASINSLEDFTAHLTKIHSSLIHTDIKNHIIPFKFNTENLQCAICKKEYKYFKLLSEHMSEHYRNYECSVCERAFINKQSMQTHSYRHNKGVFKCSHCPKVFDSRPKRSVHERVVHALSNKTRKCSFCSERFATKDLVQSHEVKAHGVKPTVFSCQACNKSYHSQSSLTTHRKRYHLMLRPHKCSYCDMAFFSKIELRSHTVTHTKSRDFKCDMCTKSFGTRCSLNQHVRGHLDDRRFKCDDCERTFVHRTAWKVHMRNAQRNIKVTENENAKEKSNVQTPKAPKIKLTHAEDDKDMSSLQKNKNLVANFKATVRSILKYTNATPVRGYWGIGYACTYCNYQTAAATELKHHTLTIHSKNDNELENLKYASDMIIKLDITTLKCEICDSKIDSLNEIMNHIKVIHRQPMHLDISNHIVPFNFENEALTCALCPSQFNYFKHLSEHMTEHFPNYACKECNRCFINQRSLRMHAMRHLTGTFVCAFCSKIFDTRIKMKEHERVLHLKNSKTRKCGYCEERFMDPVKKTDHEVKEHGAPVRKYACAECAKCFDSQRAVKNHMNQFHLQLRPHKCSECGKGAEQSSNREKMYQLLKEIKAILTFTNATPYKSKNIRYYCAYCSTDGPHFEDPDDLRTHTRTEHMGHRTEKIEYAMRPYWMNENHSEKVKTITCEFCGETFTWKQYYMNHIRKKHQNKRPYECSKCDKKFYGNYELKEHMLRHVGAKNFECTICLKKYVSMNSLKQHMKQHKKKKEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -