Eocc036652.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465507.1:6397004-6410798[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.00013 0.013 17.0 0.9 1 23 32 55 32 55 0.96 2 30 0.27 28 6.6 0.0 2 23 84 106 83 106 0.95 3 30 0.16 16 7.3 2.7 1 22 192 213 192 215 0.90 4 30 0.67 70 5.3 0.1 2 23 245 267 244 267 0.95 5 30 0.7 74 5.2 4.9 2 23 290 311 289 311 0.97 6 30 0.0026 0.28 12.9 0.5 1 23 315 337 315 337 0.97 7 30 0.13 14 7.5 2.9 1 23 342 365 342 365 0.92 8 30 0.084 8.9 8.1 0.9 2 23 373 395 372 395 0.93 9 30 0.00023 0.024 16.2 0.9 2 23 403 425 402 425 0.96 10 30 0.0024 0.26 13.0 2.1 1 23 431 453 431 453 0.95 11 30 5.1e-07 5.4e-05 24.6 2.2 1 23 459 481 459 481 0.99 12 30 0.5 53 5.7 0.6 1 15 487 501 487 504 0.93 13 30 0.0044 0.46 12.2 0.3 1 23 574 597 574 597 0.93 14 30 0.0047 0.49 12.1 0.3 2 23 626 648 625 648 0.94 15 30 4.5 4.7e+02 2.7 6.4 2 23 671 692 670 692 0.96 16 30 0.0025 0.26 13.0 0.7 1 23 696 718 696 718 0.98 17 30 2.8 3e+02 3.4 0.5 1 13 723 735 723 743 0.78 18 30 0.15 15 7.4 0.4 2 23 755 777 755 777 0.93 19 30 0.00018 0.019 16.5 2.2 1 23 784 807 784 807 0.98 20 30 0.0028 0.29 12.8 5.4 1 23 813 835 813 835 0.98 21 30 4.7e-07 4.9e-05 24.7 1.1 1 23 841 863 841 863 0.99 22 30 0.22 24 6.8 1.4 1 14 869 882 869 883 0.92 23 30 0.015 1.6 10.5 0.9 1 23 953 976 953 976 0.95 24 30 0.0011 0.11 14.1 0.3 1 23 1076 1098 1076 1098 0.98 25 30 0.43 46 5.9 1.3 1 23 1103 1125 1103 1125 0.95 26 30 0.22 23 6.8 2.1 2 23 1133 1155 1132 1155 0.94 27 30 0.00081 0.085 14.5 1.8 1 23 1162 1185 1162 1185 0.96 28 30 3.1e-05 0.0033 18.9 5.4 1 23 1191 1213 1191 1213 0.98 29 30 5e-06 0.00053 21.4 2.0 1 23 1219 1241 1219 1241 0.99 30 30 6.7e-07 7e-05 24.2 0.6 1 23 1247 1269 1247 1269 0.99
Sequence Information
- Coding Sequence
- ATGATAGAGGAACTGAAGAAGCACCGCTCAAATCTACGAGAAATCCTAACTTACTCCAATGCCACGCCTTTTCTTGGGATAAATTATCGAGGTTATATGTGTTGCTACTGTGATACACAGTATCCAGACCCTGCAGATCTGAAGAAGCATATCCGTGACAATCATCGACGCTTGTACAGTTCTCTAACTCCAATTGAAAAGATTACTAGAATAGATGAGTTTTGTGTCAAGCTGGACTTAACGGATTTACGATGCACACTCTGCGACGCTGACATAGACACTTTAGAAAACTTGTTAGAACATCTAAAGATTGAACACGAAAGGGAAATACGCATGGACATTAAAAACCAATTCTTACCATTTAAGTTCAGTAGTGATGTCTTAAAATGTTGTGTCAACAAATTAAAGAAAGAACCTGAATCAAAACCAAATAAACCGACAGCCAAGCCAAAGCCGCCCGCTGGTAAAACAAAGCCGTCTGTAAGAGAAGAACTCGAAAAGCAAACGAATAACACGCAAATGATTATAATGTGCAGCAATGCGACCCCTTTCCTTCAAAAGATAGACACGGGGTATGTCTGTTGTTACTGCAGGGAACAATATCAAGACCCTGCCGATCTAAAGAAGCATAACCATGAAATTCATGGAGACAAATATGACCCAGTATCTCCAAACGTTATTATGAACAGCAGGAAATCTGAATTCTGCATCAAATTAGACATTACAGGCTTACAATGTAAACTCTGCAGCACAGACATTCCGTCATTAGAGGCACTTAAAGATCATCTCCAAAATGAgcacaaaaaaaagatatttacgGATATCAAGAATAAGATCATACCATTCAAGTTCGAAAGTGAAGATATCCGCTGCTGCATTTGTTCCAACGTATTCGAAAAGTTTCGGAAATTACAGGAACATATGCATTCACATTACAGGAACTTTGTTTGCGAGCATTGCGATCTAGGTTTCGTGACCCTTTTAAGTCTAAAAAGTCATGCAGAAAAACACAAATTAGGCGAATTCAAATGCGAATATTGCCCCAAGATATATGATACACATCGAAAGAAAAAGTCGCACGAAAAAGCAGTGCATGTAACGGGATATTTGTTGAGCAGATGCGGGTACTGCAACGAACGATTCACGAGTACTAAAAACAAGGATGAACATTTAGCCAAAGTTCACGGCGTTCAGTTACGTGCACTCAAATGCCAAGCATGTGACAGAACTTTCGAGAACAAAAGAGCTTTGACAATACACACGAGGAGAGATCACTTGATGGAAAGAAAACATAAATGCTCCCAATGTGAAATGTCATTCTTCAACGCTAGTAGTTTAAAAATGCATGCAGTCAAGCATTCAGGCTTGAAGGAGTTTCAATGTGACGTATGTCAGAAGTCTTATGCTCAAAAGAAGACTTTGACGCAGCATATGAGGACCCATTCAGATGAGAGACGCTTTAAGTGTGAACGCTGCGAGCAGGCGTTCGTGAAGAAGAGTAACCAAGAAACAGTGAGCAagaaaattgaaatcaaacCTTTAGAGCCGGCTGTATTAGTTATCGTAGAACCTGAAAGAAAAACCAAATTGCAGGTAAATACTACGCCCAAACTGCACGTCGAACCGCACGTCAGTGGGTTGGGGAAACATCGCCACAACCTCGGGCAAATCTTACAATGCTCTAACGCAACACCAATAATGCGTCGCGGAGGCGTTGGGTACATGTGCAGTTACTGTTTTCAAGAGTTCCCAGAGCCCGTTGATCTAAAAAAGCATACACTAGCAAACCATACGTCTAAAACAGACCCTACAATTAGCTACGCTAAAAGCCCAGGCATATCAGAATACAGTGTCAAAATAGACATCACCAACCTCGAGTGCACGGAATGTGGTAAAACCATAGACAGTCTAGAAGATCTATTGACCCATCTGCAACATGAgcacaaaaaaattatatacacTGACATTCCAAATCATTTCATACCTTTCAAATTTCTAACAGATGATCTTAGTTGCTGCCTGTGTCAGAGTACTTTCGACAAGTTTAAAAAACTTCAAGAGCATATGCACTCGCACTACAGGAACTACGTATGTGAAGAGTGCGATTCTGGGTTCGTTACTCGTGGATGTTGGATCAGACATCGTAGCACACACTTAAAAGGAGACTTCCCTTGCAGCTTCTGTCCGAAGGTCTACGACACAATGTTGAAGAAACGGTCTCATGAGAGATGTAGCCATATTCACGCCGATATGCTTCCTAATAGATGTGCATTCTGCAACAAAGGCTTTAAAGAATACTATGATAAGGAAATCCACATGTCTGAAGTCCACGGTGCTAAAGCGTCACTGTACAAATGTAATGCTTGCGACAGGAGTTATAAAAGCAAGCGTAAACTGAGGATCCACGTCAAAAGAGATCATCTATTAGAGAGGAGGCACAAATGTCTAACTTGTGACATGACATTTTTTTCCTCCCACGATGTTAAAAAGCATATGATCACACACACGAAGGAAAGGAACTTTCAATGCGAAATTTGTCTGAAATCTTTTGGGAGAAAATCCACTCTTCAAAGTCATATGAGAATCCATAACAATGATCGACGATTTAAATGTGAATTTTGTGGGATGTCGTTTATTCAAAAGTATAAACAAGGAAAACTGGCTACAGCTACGAACATCAAAATAGAGCCGAAAACTGAAGAAATAGTAGTACCCAAAGAAgaaaatgtacaaataaaacCTAAGTCAGCACCTAAACCACGCATAAAGCGACTACTACACAAGCATCTCCACAATCTGAAACTAATATTAGAATCTACGAATGCGACGATGATACTGAAACATGGAGATAAAGGATACTTGTGCTGTTATTGCTCGGAAGCTTTTCAAGAGCCAATGAATTTGAAAGTGCACACTTTAACGGAACATGAAAATGAAGACAAATTCTATGGCAACATAAAAGCCAAAGGACCAGCTAGATTCTTAGTCAAACTGGACATCACGAACTTAAAATGCATGCTTTGCAGCACCAACATAGATTCTCTTGGAGATATATTCGTCCATCTCACAGAGAAACATGATAAGAGCTTCCATACTGATatacaaaatcaaatatttCCCTTCAAATTCAATACGAAACAAATGAAATGCTGTCAATGCACTAGTGACGTCGTCTTCGCCACGTTTAGTGCATTACATGAGCATATGCACCAACACTACAGATACTTCGTTTGTGACGTGTGTGATGCTGGATTCGTCAATCATGATACTTTATCCAGCCATAAAATCACCCACACGAAAGGAACCTTTGCCTGCCGACATTGTCCGGTCGTATTCGACAACGTCTACAAGAGAAGGAACCACGAAATCCGCCATAGTAAAGCTGGCAAATTAAACAAATGCCACTTTTGCAATgaattttttaaagattataatACGAAAGAAATACATCTTGCTTCGGTACATGGCGTTGCTCCAGCGAAACACAACTGCACTGCATGTGACAGGAGCTTTCCTTCTAATAGTTTCCTTAGCGCACATGTCAGACGGTTCCACTTGATGGAGAAGACTCACAAATGTTCAGAGTGCGGCAGAGCGTTCTTCAGAGAAAGCCATCTTAAGAAACATACGCTGAGTCATACAGGGGTTAAAAATTTCAAGTGCGATGTCTGTTCAAAGCAGTTTACTACTAAATCTATTCTTACTCGGCATATGAGAATTCATAACAATGATAGGCGCTTTAAATGTACAATTTGTGAGCAGGCGTTTGTGCAGAAATCTAGCCTTATCTGGCATATGAAGAAGCATGTAGATACTGGCTCTACTTGA
- Protein Sequence
- MIEELKKHRSNLREILTYSNATPFLGINYRGYMCCYCDTQYPDPADLKKHIRDNHRRLYSSLTPIEKITRIDEFCVKLDLTDLRCTLCDADIDTLENLLEHLKIEHEREIRMDIKNQFLPFKFSSDVLKCCVNKLKKEPESKPNKPTAKPKPPAGKTKPSVREELEKQTNNTQMIIMCSNATPFLQKIDTGYVCCYCREQYQDPADLKKHNHEIHGDKYDPVSPNVIMNSRKSEFCIKLDITGLQCKLCSTDIPSLEALKDHLQNEHKKKIFTDIKNKIIPFKFESEDIRCCICSNVFEKFRKLQEHMHSHYRNFVCEHCDLGFVTLLSLKSHAEKHKLGEFKCEYCPKIYDTHRKKKSHEKAVHVTGYLLSRCGYCNERFTSTKNKDEHLAKVHGVQLRALKCQACDRTFENKRALTIHTRRDHLMERKHKCSQCEMSFFNASSLKMHAVKHSGLKEFQCDVCQKSYAQKKTLTQHMRTHSDERRFKCERCEQAFVKKSNQETVSKKIEIKPLEPAVLVIVEPERKTKLQVNTTPKLHVEPHVSGLGKHRHNLGQILQCSNATPIMRRGGVGYMCSYCFQEFPEPVDLKKHTLANHTSKTDPTISYAKSPGISEYSVKIDITNLECTECGKTIDSLEDLLTHLQHEHKKIIYTDIPNHFIPFKFLTDDLSCCLCQSTFDKFKKLQEHMHSHYRNYVCEECDSGFVTRGCWIRHRSTHLKGDFPCSFCPKVYDTMLKKRSHERCSHIHADMLPNRCAFCNKGFKEYYDKEIHMSEVHGAKASLYKCNACDRSYKSKRKLRIHVKRDHLLERRHKCLTCDMTFFSSHDVKKHMITHTKERNFQCEICLKSFGRKSTLQSHMRIHNNDRRFKCEFCGMSFIQKYKQGKLATATNIKIEPKTEEIVVPKEENVQIKPKSAPKPRIKRLLHKHLHNLKLILESTNATMILKHGDKGYLCCYCSEAFQEPMNLKVHTLTEHENEDKFYGNIKAKGPARFLVKLDITNLKCMLCSTNIDSLGDIFVHLTEKHDKSFHTDIQNQIFPFKFNTKQMKCCQCTSDVVFATFSALHEHMHQHYRYFVCDVCDAGFVNHDTLSSHKITHTKGTFACRHCPVVFDNVYKRRNHEIRHSKAGKLNKCHFCNEFFKDYNTKEIHLASVHGVAPAKHNCTACDRSFPSNSFLSAHVRRFHLMEKTHKCSECGRAFFRESHLKKHTLSHTGVKNFKCDVCSKQFTTKSILTRHMRIHNNDRRFKCTICEQAFVQKSSLIWHMKKHVDTGST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -