Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_950022335.1
Location
OX465499.1:11188849-11191281[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4.8 7.1e+03 -1.6 0.0 4 19 169 184 167 188 0.89
2 5 2.6e-07 0.00038 21.7 0.2 2 45 273 318 272 319 0.85
3 5 4.3e-09 6.4e-06 27.4 0.1 3 44 327 372 325 374 0.93
4 5 1.6e-09 2.4e-06 28.7 0.0 1 43 378 420 378 422 0.97
5 5 0.00062 0.91 10.8 0.0 3 45 430 474 428 475 0.89

Sequence Information

Coding Sequence
ATGGATGTTGATACAATCGTGGAGAACTATGAGACCGACTCAGAAGTCGACGAGAGCGAGGGCGATGAAGGTTCGATTTTGGAAGCTGACACTATGAGTCAGCTAACTGAAGTCGTGGACGATGACGACTTACGCAGTGTTGGGATGTCGCGTAGCCGCCGCACAGGGGCCAAACGAACTCCCAGTATCTTTAAAGAAAACAGTAAATCATCAGTAGCGGTAGCTCAAATAAATCTAGCTTTGTCGGCAAACAAATTATTAGATGAAAAGCTGGAGAGGTTGGAGAGAGTTCTCTTGTCACGTCTAAATGAGTGTCGGCAGAAACTAAAAGTGGTACAAAATAGTGATGGTACACAGaatgataaaaatgaaattttccgTTACGTCAGTTGTGGTAGACCCTACTTCAAGGACCGACAGAACTTCCCGGCTCCAGATAATGAAGATGCTAAAATGGCAAAATCTCAGATGTATGACTTCTCTTTAGTCATTTCTGCACCAGGGTGGACAGTCAAAGATAAGTCTCAATTGGTTAGCATGATCCACAAAATGTCAATagataataaaaagaaagagcTGCACGCTAAAATTACTGACTTAAAACGCTCAAATAAACCAAGTAAAGTTGTGGAAAAAGAAGTAATGGCCATTAGAAAGGAAATTGACAGAGTAAGTAAATTGCCTTTGAGTAAAGTAGCTCTTCCATTAGATCAGGAATATGATTGGGAAATGTTAACAAACAAGTTAAACAGAAGGCACACAGCACACGAGTATCAAGCCCTGTGGAAGTTATTCTTTCATCCTTCAATTAGCAAAAATGGTTGGGGCACCGCTGAACATGCCACATTGCAGAAAATTGCTCTCCGACATTGTAAACAAGATTGGGATAAAATTGCTCACGAACTTAACACTGGCAGGACTGGGTATCAGTGTTTTGTATACTTTCGTACAAATATGAGCAACTCATTTACTGGAACAAAATGGACTCCTGAAGAGATAACATACCTTAAAAGATTGATAGAATATTACAAAGAGGATAATTACATTCCATGGGGCAAGATAGCTGCAGCAATGGAAAACCGAACCAAAATCCAAATCTATAATAAGTATATAAGGCTCATTGAGCAAAGGAAAGGCAGGTTTCTCTCTGAAGAAGATGCAGTTATTCTTAATTgtgtggagagatttggaaccGATTTTAGGAAGATGACTTCTTTTTTACCTGGTCGATCTATGATCCAAATTCGTGCCCGATATCAAGTCTTGAGCAAAATGAGAGTATCAACTGTGTGGACTGTTGAAGATGATAAAAAACTTGTGCAGTTGATGTCCAACCCAGAGTCAACCATAAACTTTTCAACAGCTACACAATTTTTTCCAGGCAGAAACAGAACAAAAATTAGATCTAGATTTGTTACTTTAGTTAAATGGATGAAGAAACATCCACATTTAGATTTGGAACACGCACCACGACGAGGTGCGCGGCGTCTGAATCATGGGCAAGCCAGTGAAAACCTGAATGATGCAGTAGAGAATTTAAAAAATTCGTTGATCACATCCGTCCAAAATAGGGCTAAGAAGAAGAGGTTAACTGAAGAGTCCACACACAAAGACTTAAATGATGCTATTGTTGTGATAATTGTGAATTGTGTACTAAAGGAAAATGAAGCAGAAGCCAAGAGAAGTAATCCAGAAGATTATCAAATAGTTTTAGGTCCTGATCATGTTGTCTCATTTGCTGACTTAAATATTACAAACCTACGCAAAATTATTATATGTTTAAACGCTTGTCTAGATGAGGCTAGTTATACGAACAGCATCTACATAGAAGACTATCCAGGTTTAGGTGATAGTAGTCATGATGTTTCTTTAGTTAGAGTGAAATCCTATTCTCGAAGGACGTCCAACCAACCTGTAAATGTTGCTGAAGCTCCTAATGTTTGGGGAACTCCTACACTTTTTCTATGGAAGGGAAATATGTTAAGCCAACGAAACTATGTGTTGCCTCCACAACTGGCAACTATAACTGGTGTTAGAGCAATTATGTCATATGTGATGTTAAATGGTCCATACACTGAAAATATAAACCTACACGTACTTTGCAAGCGGAACATATTATTGAAGGAGTGTTTAGCTCTGGCTCTTGATCGCTTCTATGTTTTGTTCACATGGCCTATGATCTTATCAAATGAATTGCCTAGTGAATATACTGTATCTACTGCACCAAGAACCAATTCTGTTTTTGCCAGACCACCAACATTGCCAACTGCACCTGAAGTTACAATTAATGTTAAATgtataaagaaatataaaaataaaaacatcacagAAATAATTGATCTGGATGAAGATGTGACTAAGAAAAATGATGAAGTTGTTGAGGTGCAAATAGATGCTGATGATGAGAAGACAGAACCACAACTCTTTGAATGA
Protein Sequence
MDVDTIVENYETDSEVDESEGDEGSILEADTMSQLTEVVDDDDLRSVGMSRSRRTGAKRTPSIFKENSKSSVAVAQINLALSANKLLDEKLERLERVLLSRLNECRQKLKVVQNSDGTQNDKNEIFRYVSCGRPYFKDRQNFPAPDNEDAKMAKSQMYDFSLVISAPGWTVKDKSQLVSMIHKMSIDNKKKELHAKITDLKRSNKPSKVVEKEVMAIRKEIDRVSKLPLSKVALPLDQEYDWEMLTNKLNRRHTAHEYQALWKLFFHPSISKNGWGTAEHATLQKIALRHCKQDWDKIAHELNTGRTGYQCFVYFRTNMSNSFTGTKWTPEEITYLKRLIEYYKEDNYIPWGKIAAAMENRTKIQIYNKYIRLIEQRKGRFLSEEDAVILNCVERFGTDFRKMTSFLPGRSMIQIRARYQVLSKMRVSTVWTVEDDKKLVQLMSNPESTINFSTATQFFPGRNRTKIRSRFVTLVKWMKKHPHLDLEHAPRRGARRLNHGQASENLNDAVENLKNSLITSVQNRAKKKRLTEESTHKDLNDAIVVIIVNCVLKENEAEAKRSNPEDYQIVLGPDHVVSFADLNITNLRKIIICLNACLDEASYTNSIYIEDYPGLGDSSHDVSLVRVKSYSRRTSNQPVNVAEAPNVWGTPTLFLWKGNMLSQRNYVLPPQLATITGVRAIMSYVMLNGPYTENINLHVLCKRNILLKECLALALDRFYVLFTWPMILSNELPSEYTVSTAPRTNSVFARPPTLPTAPEVTINVKCIKKYKNKNITEIIDLDEDVTKKNDEVVEVQIDADDEKTEPQLFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01084202;
90% Identity
iTF_00928634;
80% Identity
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