Eocc007230.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465480.1:17106963-17107403[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-07 0.0004 21.2 0.0 3 40 17 53 15 56 0.81 2 2 1.6 1e+03 0.7 0.0 17 23 131 137 126 143 0.78
Sequence Information
- Coding Sequence
- atGCCTAAAAGAAGAAGCCAACCCATTTCAAAGGCATCGTGGAGCCAAGAGCAACTACACAGGGGTATCAGACTAGTGGATGAAGGAACAGCTATAAGAGAAGCAGCTCGATCATGTGGCGTGCCATTTTCAACACTTCAAGAAAGAATCAAGAACAATAACCGCGATAGGCCACTACTGGGAAGAAACACAGTCTTCACAAGGGAACAAGAAGAGGAAGTGGCCTCCCAAGTTAAGTTTCTTGGTAAAATATTTTACGGGTGCACTTCGCTTCAAATTAGAAAGATGGCATATGAATAcgctgtaaaaaataatattaagcaCAACTTTAATGATACTTTTGAACTAGCTGGCAAGGATTGGCTCAAAGGCttcataaaaagaaataatttatcCATCAGGAAAGCTCAAGGCATGAGCTTAAATAGAGTAACTGCTTAA
- Protein Sequence
- MPKRRSQPISKASWSQEQLHRGIRLVDEGTAIREAARSCGVPFSTLQERIKNNNRDRPLLGRNTVFTREQEEEVASQVKFLGKIFYGCTSLQIRKMAYEYAVKNNIKHNFNDTFELAGKDWLKGFIKRNNLSIRKAQGMSLNRVTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029213;
- 90% Identity
- -
- 80% Identity
- -