Eocc006640.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465480.1:14348427-14348900[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-10 2.7e-07 31.3 0.0 2 45 13 55 12 55 0.92
Sequence Information
- Coding Sequence
- ATGCCGCCTGTAAAAGGACAAATGTTCCGTTATTCTGAAGCTGATATGGAAGCGGCTATACAAGAATGTAGGCGAGGCGTCCCGACAGCTACTGCGGCAAAAAAATTCGGCGTACCAAGAGTTACTTTACTGAATAAAGTGAAGGGAAAGACAcctataaaacgtaaaatgggAAGAACCTGTTACATGACCGAAGAAATAGAAAGTATGTTGGTTACATGGGTAAAAGCAATGGTGAAACAAGGTTTTCCAATAGGTAAGGATAATTTGCTAGATAGCGTTAAGAAAATAGTAGATGATTTAAATATAGAAACTCCTTTCAAGAATGGCAGACCTGGAAAAAGATGGTACACCAGCTTTTTAAAACGTCATCCTGATCTTATAACAAGACAGCCCCAAAACTTGACTGCTTCCAGAGCTTCTGTAACAACATCTCAgttgaaaattggtttgaagaAGTTAGCAGTTACTTGA
- Protein Sequence
- MPPVKGQMFRYSEADMEAAIQECRRGVPTATAAKKFGVPRVTLLNKVKGKTPIKRKMGRTCYMTEEIESMLVTWVKAMVKQGFPIGKDNLLDSVKKIVDDLNIETPFKNGRPGKRWYTSFLKRHPDLITRQPQNLTASRASVTTSQLKIGLKKLAVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00044439;
- 90% Identity
- iTF_01246781;
- 80% Identity
- -