Eocc002201.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465478.1:3787017-3788991[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-10 2.5e-07 31.4 0.0 3 37 68 102 66 108 0.93 2 2 0.95 6.1e+02 1.4 0.0 22 30 193 201 177 202 0.74
Sequence Information
- Coding Sequence
- ATGCCATCAAAACTGGgtTTTACCAGAAGTTTAGAATGCCTGGTGTTTTGGGCTGTATTGATGGCACTCACATTGCTATTGTTAGGCCTGCATAATATGAGGAGAGACTTTTTTAACCGCAAACGTTATCACTCTATAAATGCACAAATTATAATTTCTCGGAAGTATGAAAGAAGGACACTACGAGCATCATGGAGAGCGGACGACTTAGACAAAGCCACGCGTAGTGTCCTAAGCAAAGTAATGGGTGTTAATGAGGCATCCAGAAACTTTGGCATACCGTCTCGAACTCTAAGAAGACACATTTTATCAGGAAAATCAAAGGGCCCTCTAGGACGCAAACCAGTATTTTCTgtagaatatgaaaaaaaactgGTTGCCCATATAAAGAAATTGGAAAAAGTTGGATTTGCCCCTGACAGAAAAGATGTAAAAGAAATGGCATTTCAACTAGCTAAgaaacttaatattaaaaacccaTTTTCAGCAAGTTCAGAATCAGCTGGAACTGTATGGTTTTCGGGTTTCATGGCTCGCAACTCAGAATTAAGCCAAAGAAAATCAGAAGGCTTGTCACTTGCTCGAGCTTATGGAGTTAATAGAAAATATGTACAagatttttttgatttacactcgagagcaatgaatccgggtcacttaaagaatgttaaaaatctcggaaactaa
- Protein Sequence
- MPSKLGFTRSLECLVFWAVLMALTLLLLGLHNMRRDFFNRKRYHSINAQIIISRKYERRTLRASWRADDLDKATRSVLSKVMGVNEASRNFGIPSRTLRRHILSGKSKGPLGRKPVFSVEYEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKLNIKNPFSASSESAGTVWFSGFMARNSELSQRKSEGLSLARAYGVNRKYVQDFFDLHSRAMNPGHLKNVKNLGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -