Eocc002282.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465478.1:4402669-4403157[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-11 1.1e-08 35.8 0.1 1 40 13 52 13 56 0.90 2 2 5.5 3.5e+03 -1.0 0.0 16 23 129 136 126 136 0.82
Sequence Information
- Coding Sequence
- ATGGATACAACAAATAAGAAACGTCGTGGTGAATGGACTGAGGAACAGCTAAAATCGGCTATGGAATCTATAAAAAACAGTCGTATGTCACAGCGACAAGCGGCAGCTACTTTCGGTGTCCCCAGAAGGACATTAAGAACCCACCTAAAGTCTGGTagtgagaaaaaaataactggtcGAGCTACAACTCTAACTACTGCCCAAGAAAAAGATTTAGCAAGACGAATAATACGACTGGCTCAACTAGGCGTACCATTGGCCCGCAAAATTGTGAGAAAACAAGCCTACTTATTTTGTAACGCGCATAAAATACCAAATACATTCAACGACCACAAGTGCATTGCTGGTCGGAAATGGCTGGCAAATTTTTTGAAACGAAATCCTGAAATTTCGATTCGCAAAGCACAGTTTATGAACTCTGCGAGGGCTCAGAAATTGAATAAGTACATAGTGCAACAACATTTCaccgcaataaaaaaaaatttatga
- Protein Sequence
- MDTTNKKRRGEWTEEQLKSAMESIKNSRMSQRQAAATFGVPRRTLRTHLKSGSEKKITGRATTLTTAQEKDLARRIIRLAQLGVPLARKIVRKQAYLFCNAHKIPNTFNDHKCIAGRKWLANFLKRNPEISIRKAQFMNSARAQKLNKYIVQQHFTAIKKNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01166539; iTF_01166538; iTF_00636219;
- 90% Identity
- -
- 80% Identity
- -