Eocc027882.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465497.1:12407271-12409079[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-14 2.2e-11 44.4 0.0 1 39 13 51 13 57 0.91
Sequence Information
- Coding Sequence
- atggGAAAGGTTAAAGCTGTTGATCCTAGAAAATGGACGGAAGAAAATATGCAGAAGGCGGTGGAGGAtgtaataaataagaaaatgggGGTAAATGAAGCGAGTCGTTTATATGAAATACCTTCACGCACATTGCGAAGACACATTCTCAGGGGTTGGAGGTCTAAGCAGAGAATTGGAAGACCTTCAGAATTAGGATATGAGAACGAACTAAAACTTGTAGCTCACATTAAAAAGCTTGAATCCATCGGATTTCCCTTGGAGCAATCGAGACTGCAGTCTATAGCTTACGACTTTGCTGAAAATCTTCGATTGCCACATCGATTCAATAATGAGAAGAAGTCAGCAGGCTGGGATTGGTTTCAAGGATTTATGAAGCGTCATCCAGAACTGAGTAAACGTAAAGCAGAAGGCCTGTCATTGGCAAGAGCTAGTGGTATGAATAGACAGGATGtcgataaatattttgaaatgttgtTGAAGGTATTGACTGATAACGATTTGATTAGTAAACCGGAAAGAATCTACAACATGGACGAGAGTGGAATACAAGTTAACAATAAAACTGGACGCGTACTAGCTAGCAAGGGTGCGAAATGTGTAAATACTGTAACCAGTACCGAAAAAGGTGAAAATATATCTTTGATTGCGTGCTGCAATGCGGAAGGTACTTTCCTTCCGCCTATTTTGATACTGAAGGGTAAATACAAAAAACCGGAATTTTGTGAGGGTCTACCACCTGGCTCAGATGTATATATGAATCAGAAATCATCTTACATCAACGCTGAACTATTTTTGAAGTGGATGAAAGAGCATTTTATACCACGAAAGCCAGACGGCAAGGTTCTTCTGATTTTAGATGGGCATTCCTCACATTCCAACTCATATGAAATGCTACAATTGGCTTCGGAAAACGATGTGATTATCCTTTGTCTACCAAGCCATACTACTCAGGCTCTTCAACCATTGGATAGAAGTTTTTTTAAGCCATTCAAAAGTTACTTGTCTAAAGAAGTGTCCACTTGGTTTATTAACAACAAAGGACGACCTTTTAGTCGATACCACATTTCAAAAATGATTGGTGATGCCTGGTACAAGTCTGCTATACCAACAATTGGTGTTTCAGGATTTAAAGCGACAGGGATTTGCCCTTATGATCCTAATGCTGTGCCTGAATACTTCTTCAGAATTTCTGATGCATCAATGGGAAATATACAGAATAATGATGATTCGCAAGCAATTAATAATCATTCACAGTCAACTCAGAACACTATTGCTCTTTCCTTGCCAAGTACATCCACATCTctgattattaataataataataatcaagtcATTCAAATGTCGACACCAGAATCTTCTGAGACTACACAAGAAGGAACACCATCTAAGACCTTACAAATAATTAGTCCATTGCCTATTATTCaacaaaaagtaagtaaaagGAAGCAAACTGTTAAGGTTTTGACATCAGAAATTCATTTAGCAACTCGTAAACTGTTTgaagataaaaaaaagttacaagaGAAAAAGCGTAAGAAGAATGTTGTGAGGGATTTATCATCGTCATCAGAAAGTGAAGTAGAGTTGCAGCTTAGTGAATCTAGCGAAGAATGttctgatgaaaatgaaaacacaTGTGTAGAATGTCACGAGGATTACTATCGTACCAAGAAGAAGAGTGAATGGATTCGGTGTTTGCAGTGTTTTGGCTGGTTACATGAAGACTGTACAAGTTACAGAGAGAAATGCAACAACTGCGGTACCAAAGAAAAAGGGAAAGGGAAAGGAAAAAGAACCTCTAAATGA
- Protein Sequence
- MGKVKAVDPRKWTEENMQKAVEDVINKKMGVNEASRLYEIPSRTLRRHILRGWRSKQRIGRPSELGYENELKLVAHIKKLESIGFPLEQSRLQSIAYDFAENLRLPHRFNNEKKSAGWDWFQGFMKRHPELSKRKAEGLSLARASGMNRQDVDKYFEMLLKVLTDNDLISKPERIYNMDESGIQVNNKTGRVLASKGAKCVNTVTSTEKGENISLIACCNAEGTFLPPILILKGKYKKPEFCEGLPPGSDVYMNQKSSYINAELFLKWMKEHFIPRKPDGKVLLILDGHSSHSNSYEMLQLASENDVIILCLPSHTTQALQPLDRSFFKPFKSYLSKEVSTWFINNKGRPFSRYHISKMIGDAWYKSAIPTIGVSGFKATGICPYDPNAVPEYFFRISDASMGNIQNNDDSQAINNHSQSTQNTIALSLPSTSTSLIINNNNNQVIQMSTPESSETTQEGTPSKTLQIISPLPIIQQKVSKRKQTVKVLTSEIHLATRKLFEDKKKLQEKKRKKNVVRDLSSSSESEVELQLSESSEECSDENENTCVECHEDYYRTKKKSEWIRCLQCFGWLHEDCTSYREKCNNCGTKEKGKGKGKRTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00172657;
- 90% Identity
- iTF_00121324;
- 80% Identity
- -