Basic Information

Gene Symbol
ct
Assembly
GCA_950022335.1
Location
OX465494.1:1186984-1190024[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-32 5.1e-28 98.1 0.0 4 77 287 361 285 363 0.96
2 2 7e-31 7.2e-27 94.4 0.0 3 75 490 563 488 567 0.95

Sequence Information

Coding Sequence
ATGAAGACGCCCGGTGGACCTCCCCACAACGATGACTCCAGAAGCAATGAGGACTCTAGCTCACCAAGGACTCAATGCCCTTCTCCTTTCTCCAATAAGGATGGGAGTCAAAACAGAAGACTCAAGAAGTACGAGAACGATGACATTCCTCAAGAGAAGGTGGCGCGCATATACCAGGAGGAGCTTGCCAAAATCATGACCAGGAGAGTAGAGGACATCCGCCGCGAAGGTTTCCCTGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCACCACACATGGAGAGGCCACCGGAAGACATCCGCATGGCCCTAGAAGCGTACCACAGAGAACTTGCCAAGATCCAGCCGGGTGGCAACATTCCCAACCTCCACAACTTGCCAGCCATGCCGCCCTTTCCGAACCTTCTCGCCTTGCAGCAGCAGGCGATGCAACAAGCACAGAACCAACAGATGAACGGCTCAGGAGCGGTCCAAGATCTCTCTTTGCCTAAAGATAAACACGCCAAAATAAATGGAATGACTGATAGTGATAAGGATAGATCAATGGATGCCGAAGAGGCTATAAGGCACGCGGGGAGCGCATTCTCATTAGTAAGGCCAAAACTAGAGCCGGGACAGCAATCACAAACTGGATCGTCCGCGTCCAGTCCACTGGGGAACGCAATACTACCGCCTGCAATCACTCCAAATGAGGATTTCAGTAATTCAGCGGCAGCAAGCCCACTGCAGAGGATGGCTTCGATCACGAACAGTCTGATCTCCCAGCCGTCAAACCCTCCTCATCATCCACCCGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACTCAGCAACAATTTGATCTCTTTAACAATTTAAACACAGAAGATATAGTAAGGAGAGTGAAAGAGGCTCTGAGCCAGTACTCCATTAGCCAAAGACTGTTCGGAGAATCCGTCCTTGGTCTATCACAAGGATCCGTGAGTGACTTGCTAGCGAGACCGAAGCCCTGGCACATGCTGACGCAGAAGGGACGAGAGCCTTTTATTCGCATGAAGATGTTCTTGGAGGATGACAATGCAGTCCATAAGCTGGTTGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACTGGAAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCCATGCCGCCAACACAGAAGATGATTTCCGACGCAACCTCCTTGCTGAGCAAGATGCAGCAGGAGCAGCTTCTAGGCGCGGGTCACCTGGGTCACTTAGGGCAGCCCACGCCGCTGCTCCTCACGCCGCCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCGCCGCAGCAccacgacaacaacaacaagGAGCGCAAGCCCCCGCCGCCCCCCCAGCCACACCACCAGCCCCCCGTCATGCGCAGCCTGCACCAGCATATATCGCCGAGCGTCTACGAGATGGCCGCGCTCACTCAAGACTTAGACACGCAAACCATTACGACCAAAATTAAGGAAGCACTACTGGCAAACAATATTGGGCAGAAAATTTTTGGTGAAGCTGTTCTAGGTCTATCACAGGGTTCTGTCAGTGAATTGCTGTCAAAACCAAAACCCTGGCATATGCTCAGCATCAAGGGTAGGGAACCTTTCATTCGCATGCAGCTGTGGTTAAGCGATGCTCACAATATCGACCGCCTACAGGCTTTGAAGAATGAGCGACGGGAAGCGAGTAAACGACGACGGTCAAGCGGCCCCGGACAAGACAACTCATCCGACACATCGTCGAATGATACGTCAGAATTTTACCACTCGAGCTCGCCGGGCCCCACAGCCGGAGCGCCGTGTGCCAAGAAACAACGAGTACTGTTTTCGGAAGAGCAGAAGGAAGCACTCAGATTAGCATTCGCACTCGACCCCTACCCAAACATGCCAACGATCGAATTCCTCGCCGCAGAATTGGGTCTGTCCTCGCGAACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTAAAACAACAAGCGCCTCATGGCTTGCCCGCCGAACCTCCCGCGCGGGATCAGTCTTCGGCGCCTTTCGATCCAGTCCAGTTCCGTCTTCTCCTCAATCAGAGACTACTGGAACTTCAGAAGGAGAGGATGGGTCTCGCTGGCGTACCCCTGCCCTACCCGCCTTACTTCGCGGCCAACTCCAACCTAGCGGCGCTAATTGGTCGCGGGCTAATACCTCCCGAAGATCAGGTGAAGGACCAGTCTGGCGGCCTCGACCTTTCGATGCCGCTGAAACGAGAACCCGATGGTGATGACTTCGAGGATGATGACGTCGAGAGCAACCTCGGCTCTGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAGGCGGCGTCGACGCCGCACGCTACAGGTCGATCCAGTAGACGAAAGCCTGCAGCGCCGCAGTGGGTTAATCCTGACTGGCAGGATGAGAAGCCACGTAACCCTGACGAAGTGATTATTAATGGAGTATGTGTGATGAGAAGCGATGACTTCCGAAGAGAGGCGGAGGAGACGGTGCGCGTGGAGCCGTCGCCGGTGGCGCGCGAGGGCTCGCCGGCAGCGTCGCCCGCGCCGCGCACGCCGCACACGCCGCACACGCCACACACGCCGCACACGCCGCGCCCGCCGCACACACCTGAAGACGTGATCCCTGAAGACAAAATCAAATCCGAGACCGACGACGGCTGGGAGTACTAA
Protein Sequence
MKTPGGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPAMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKHAKINGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSQTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHQPPVMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDQVKDQSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHATGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVAREGSPAASPAPRTPHTPHTPHTPHTPRPPHTPEDVIPEDKIKSETDDGWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00622600;
90% Identity
iTF_01335819;
80% Identity
iTF_00711711;