Eman022652.1
Basic Information
- Insect
- Eurema mandarina
- Gene Symbol
- ZBTB11
- Assembly
- GCA_018238005.1
- Location
- DWAJ01023729.1:84-1931[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.039 3.4 8.9 2.1 1 23 47 69 47 69 0.95 2 16 0.017 1.5 10.0 0.0 2 23 97 119 96 119 0.94 3 16 0.00055 0.048 14.7 0.8 2 23 140 162 139 162 0.95 4 16 2.7e-05 0.0024 18.8 0.3 1 23 167 190 167 190 0.95 5 16 0.00013 0.012 16.7 4.5 1 23 195 218 195 218 0.97 6 16 0.033 2.9 9.1 5.6 2 23 221 243 220 243 0.94 7 16 0.056 4.9 8.4 4.1 2 22 250 270 249 270 0.95 8 16 0.0029 0.25 12.5 0.5 1 23 322 345 322 345 0.93 9 16 1.2 1.1e+02 4.2 0.1 2 23 373 395 372 395 0.94 10 16 0.0034 0.3 12.2 0.3 2 23 418 440 417 440 0.94 11 16 8.4e-06 0.00073 20.4 0.2 3 23 447 468 446 468 0.94 12 16 0.032 2.8 9.2 6.2 2 23 473 495 472 495 0.93 13 16 0.00042 0.037 15.1 1.4 1 23 500 523 500 523 0.97 14 16 6.4e-06 0.00056 20.8 4.9 1 23 527 550 527 550 0.97 15 16 0.00027 0.024 15.7 0.4 2 23 557 578 556 578 0.96 16 16 0.0048 0.42 11.8 2.0 1 23 584 606 584 606 0.97
Sequence Information
- Coding Sequence
- ATGAAGACTGAAGCAAGCCGTTTGTTTACAGATGAAGTTGCGGAAGCAACAAAAGAGTACTCGTCAGAGAGACGAAGGAAAAACTTGCAAATACTCTTCAACAACACCACGATAATTCCCTTCAAATGGCGCGGCAGGTTTTTGTGTTTCTATTGCGCTAAAGATTTTACCCTATACCCCGAGTTTAGAAAGCATACGAAATCGCACGGCCTCTGCTCGTCACAGGATTATTCATTGAAGACGGTTAAAGGAAGCCACATGGATATCAAATTGGATGTATCTGAAATAACGTGTGAAGTGTGCAATGAACCGTTTACGAAATTGGATGAGATAGTTGATCATTTAATTGTGAAGCACGATATGGAATACGACAAAACTGTTGATACGTCGTTCTCTGAGTACAGACTGGTAGATAGTAAATGCACGTTTTGCGACAAAGACTTTACGTATTTCGGTTATCTGATGAGTCATTTGAATCTCGCCCATCCgcagaataattttatatgcgaCGATTGTGGCGCTACGTTTAGCAAGAAACGTGATTTGGTTGCGCATTTTAGAGAATCTCATAAGCTCGGTGGTTACCCATGCGAGCATTGTACTGAAGTTTTTGAATCCCACAAAAAACTGCAAAGACATCAAAACAGCTATCACTTTAAGAAGTGCTTTCTATGCGACTTCCATTTTGCGACCCACTACTTATTACGTAAACATTTTCGTGACGATCACGCCGatgttaaaaacaataaatgtccGCACTGTTCCAAACAATGCAATTCATCTCAAGGCATCAAGCAACATATGAAAAAGTGCAAAATGAAAGTTGCTGTTAAAACCGAAGTGATCCCAGCTACGGAGAACTTCGTCCAGCCAAAGAAAAAGCAAAACATTGTACAGATTAGGAATAATATACTCAGCGTCTTGAATATGTCCACGGCGGTGCCTTTTAAGTTCTTCGGAAAGTTTTCGTGTTTCTACTGCTCTATTAAGTTCGCGGATTTCGATGATCTGAAAGACCACACTGCGTTAGAGCATCCCCATTGTGATATTAActctaaatgtataaaaaaatgtaaaggcGAAAGAACTACAGTTAAAGTGGATATTTCATCTCTCTCTTGCAAGCTTTGCAGTCAACCAATGGAAAAATTAGATTCGTTAATAGACCATATAATTTCAAAGCACAGGGCATCGTACGACACATCAATTAATAACTGTTTTGAGCCAtttcgaatagtgaaagaCAATATAGTTTGCATGTCCTGTCCCAGAGTGTTTAGGTATTTCGCGACGCTGTTACGTCATACGAACTCGGAACATAGTAATAATAGCCGTATATGCGATTTTTGTGGAAGAAGTTTCAAAAGTGCGACCAATTTAAACGTTCATATCTCGTATGCTCATACCGGAGCGTGTGAATGTGAGATATGTGGAGTAAAGTATAAGAACCAGTGGTGTCTGAGTCGGCATAAGGCAAAATGCCACAACGCGAAAGATTTCAAATGCCCCAACTGTCCCGAACTCTTTCCTTCGCAGTACCACAGACAGAAGCACCTAATCAAAGTCCACGATATAGGTCATaagtgctcatattgcggtcGGATGTTCACGAGGAATTCGTTCATGAAGGACCATATTCGGAGGACACATTTGAAGGAGAAAAACGTGGAATGTTCCATTTGTAGCGAGAAGTTCTTTGATAATTATCTGCTGAGGCTGCATATGGTGAAACACGAAGGAGTTAGGAAGTTTAGTTGCGACGTTTGTTGTAAGTCGTTCTTGAGAAGGAGTAATTTGGCGTCTCATATGGGCATGCATAAGAAATACGGTCACGTGGCTGCCCTGTAG
- Protein Sequence
- MKTEASRLFTDEVAEATKEYSSERRRKNLQILFNNTTIIPFKWRGRFLCFYCAKDFTLYPEFRKHTKSHGLCSSQDYSLKTVKGSHMDIKLDVSEITCEVCNEPFTKLDEIVDHLIVKHDMEYDKTVDTSFSEYRLVDSKCTFCDKDFTYFGYLMSHLNLAHPQNNFICDDCGATFSKKRDLVAHFRESHKLGGYPCEHCTEVFESHKKLQRHQNSYHFKKCFLCDFHFATHYLLRKHFRDDHADVKNNKCPHCSKQCNSSQGIKQHMKKCKMKVAVKTEVIPATENFVQPKKKQNIVQIRNNILSVLNMSTAVPFKFFGKFSCFYCSIKFADFDDLKDHTALEHPHCDINSKCIKKCKGERTTVKVDISSLSCKLCSQPMEKLDSLIDHIISKHRASYDTSINNCFEPFRIVKDNIVCMSCPRVFRYFATLLRHTNSEHSNNSRICDFCGRSFKSATNLNVHISYAHTGACECEICGVKYKNQWCLSRHKAKCHNAKDFKCPNCPELFPSQYHRQKHLIKVHDIGHKCSYCGRMFTRNSFMKDHIRRTHLKEKNVECSICSEKFFDNYLLRLHMVKHEGVRKFSCDVCCKSFLRRSNLASHMGMHKKYGHVAAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -