Ehec002321.1
Basic Information
- Insect
- Eurema hecabe
- Gene Symbol
- nfxl1
- Assembly
- GCA_026213755.1
- Location
- JADANM010000147.1:1838457-1840931[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.0072 1.8e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 18 1.6e-07 0.0038 17.6 15.9 3 19 186 202 185 202 0.95 4 18 1 2.5e+04 -4.8 0.6 1 6 227 231 227 234 0.50 5 18 2.7e-08 0.00067 20.1 13.5 3 18 239 254 236 255 0.93 6 18 2.1e-10 5.1e-06 26.8 13.7 1 19 290 308 290 308 0.99 7 18 1.1e-07 0.0028 18.1 18.5 3 19 345 361 337 361 0.86 8 18 0.62 1.5e+04 -3.4 0.4 7 11 365 369 365 369 0.84 9 18 2.1e-07 0.0051 17.3 17.0 1 18 395 412 395 413 0.97 10 18 6.5e-10 1.6e-05 25.2 14.1 1 19 422 440 422 440 0.99 11 18 0.0001 2.5 8.6 6.4 9 19 488 498 486 498 0.89 12 18 0.11 2.6e+03 -1.0 8.0 3 12 509 518 508 518 0.90 13 18 0.17 4.3e+03 -1.7 3.6 14 18 547 551 547 552 0.87 14 18 0.28 6.9e+03 -2.3 0.1 8 12 568 572 567 572 0.81 15 18 1.6e-06 0.039 14.4 4.7 1 11 588 598 588 599 0.97 16 18 0.43 1.1e+04 -2.9 1.2 15 18 613 616 612 617 0.84 17 18 0.0018 45 4.7 19.3 4 18 630 645 628 646 0.84 18 18 1.8e-06 0.044 14.3 11.5 3 16 688 701 687 707 0.83
Sequence Information
- Coding Sequence
- ATGGCGCGTAGATATCGTGATGCAGCGGCAAAATTGCAGCAAAATGTGCACAAACATTTACAAGAAATGAAAGATCTTTCCTCTTCTGAAGATGAAGAGCCTTACGAGCCTAGTGTTTTAGAAGGGGTATTTCAAAACTATCAGCGAGGCGGTGGCGACACGCTTATGTTAGATAGGACAAAGAATCTTCTAGAAGAAGCTATAAGTGGTCGTTCAGTGACATGCTTGATTTGCATAGGCTCAATCAAAAGAGTAGACGCAATATGGACTTGCGACCATTGTTTTTCTTACTTTCATCTGTCTTGTATTCAGAAATGGTCTAATGACAGCATCAGTTTACGGACAGAAGATACACAAGCACCTATAGCGGTGTGTAAGCCCCGAAAAATAGAATGGTGTTGTCCAAAATGTAGGACGTCGTACAGCAAAGAAGAAATACCGCGAAAGTATAGGTGTTTTTGTGGTAAAACTGATGATCCACCATATCATCCCTGGTTAGTACCTCATACTTGCGGGGAAGTGTGTGGTCGAAGGTTGTCATTAGGTGATAACTGTAAGCATAAATGTTTATTGCTATGCCATCCTGGTCCTTGCCCTCCGTGTCCTCAAACAGTTAACGGTATCTGCTATTGTGGCAAAGAACAGAAACGAGTAAGATGCAGTACATCTAAATGGACCTGTGGACAAAGATGTAAAAAATTACTACCATGCAAATCTCATCAATGTGAAGAACTCTGTCATGACGGTGAATGTCCGCCATGTGCTTATACCAGTCTACAAACCTGTCTTTGTGGTTCTGAAAAGGTGAAAAGGCCTTGCAATGATCTTCATTGGCAATGTACAAAAATCTGTGGGAAAAAGTATGATTGTGGCTATCATAAGTGCCAAGATGTATGCCATGCTGGCTCTTGCGGGCCATGTCCTAATTCAGGTCTGAGATCATGCCCTTGTGGGGCAAACCAACGCTTTGTTCAGTGTCCGGACAGTATAGAAACCTGTCTTGGAACTTGTGGCAAACAACAGACTGATTGTGAGCATACTTGTCCAGAGAAGTGTCATAAAGGGCCATGCCCTCCATGTCAAGTGCAAATTGAGAAGAAATGTCACTGCCTGACTCACACAAAACTAATACCTTGCAGTAAAGAGTTCAGATGTGACGTGAAATGCAGAGGCTTTCGAACATGTGGCAAGCATTCTTGTGCTCGAAAATGTTGTAACGGTAACTGTCCGCCTTGCGAAAAGGTCTGCGACAAACCATTGCAGTGTGGACGTCATAAGTGCACAACAATTTGTCATCGTGGTCCCTGCTACCCCTGTCCGAGGGAATCCAAAATCACATGTCGTTGTAAACAAACATATGTCACAGTACCATGTGGTAGAGAAAAACATATGAAGCCGCCTCGGTGTAATCTGCCATGTAAAATAAAATATAAATGTGGGCACAGTGAGGAAAATAAACACAGTTGTCACTTCGGCGACTGTCCGCCCTGCAAAGCTGTTTGCCAAAAGCCATACAGTAAATGTGAGCATAATTGCAAAGCTCAGTGCCACGAGTATGTAATGGTTGTATTTAAGCAAGTGGAGAAGCCAGCGACGCCTTGGGAAGTTCAGCCGCCTAAAACTAAGGTTGTGGCCTTAGATTGCCCTCCCTGCGATACACCTGTCCCAGTTGTATGTTTCGGAGAACATGATACAGAAATGCAGAAATGTCATTCAGCTTCACGTCGATGCTGCGGAAGAGAGTGCGGTAGAGCTCTCGCCTGTGGGAACCATACATGTTCTCTTTTATGTCACTTGTACAGCCACGATCCTAATCACCCAAATGTGCCTTACACATGCAGACCATGCAATGTCGAATGTACAGTTCCCCGTCCGACGCAATGCCCTCATAAATGCCCTAAACGCGGTTGTCACCCTGGACCCTGTCCTCCCTGTGAGATTCTAGAAAGAATAAAATGCTACTGTGGAGTAACCGAGTTATATTTGCGATGTCGTGAACTTAGCACTGCCACTGAAGAATTACTTAGCTGTAAACAACAATGTCCAAAGTTATTAAATTGTAAACATAGATGTAAGAGTATCTGCCATAAAGGACCTTGTGGAGAAAACCAGGTATGCACCAAAAAGACTAAAATTCACTGTCCTTGTGGTAATATTAAGAAAGAAGCACCTTGTAATTCAGTAAGAAACTCTGAAATATCTCTTGTTTGTGATGATAGCTGTGAATCAAAGAAACAAGCTGAAAAATTAGAAAGAGAAAGAGAAGCAAAGAGAATAAAAGAGCTAGAAGAAGAAAAAAACAGAAAGGAGCTAGCTGAATATGAATGGAAGTTGAGTGGTAAAAAGAAGAAATACAAAGAGAAGAAAGTAATTGTTAATCAAGATGACCGCAATTTTGTGCAAAAGTATTGGGTTGCTATCCTATCTATTATAGGTTTAATTTTATCAGGAGTTTTTTATATGGTATATGAATAA
- Protein Sequence
- MARRYRDAAAKLQQNVHKHLQEMKDLSSSEDEEPYEPSVLEGVFQNYQRGGGDTLMLDRTKNLLEEAISGRSVTCLICIGSIKRVDAIWTCDHCFSYFHLSCIQKWSNDSISLRTEDTQAPIAVCKPRKIEWCCPKCRTSYSKEEIPRKYRCFCGKTDDPPYHPWLVPHTCGEVCGRRLSLGDNCKHKCLLLCHPGPCPPCPQTVNGICYCGKEQKRVRCSTSKWTCGQRCKKLLPCKSHQCEELCHDGECPPCAYTSLQTCLCGSEKVKRPCNDLHWQCTKICGKKYDCGYHKCQDVCHAGSCGPCPNSGLRSCPCGANQRFVQCPDSIETCLGTCGKQQTDCEHTCPEKCHKGPCPPCQVQIEKKCHCLTHTKLIPCSKEFRCDVKCRGFRTCGKHSCARKCCNGNCPPCEKVCDKPLQCGRHKCTTICHRGPCYPCPRESKITCRCKQTYVTVPCGREKHMKPPRCNLPCKIKYKCGHSEENKHSCHFGDCPPCKAVCQKPYSKCEHNCKAQCHEYVMVVFKQVEKPATPWEVQPPKTKVVALDCPPCDTPVPVVCFGEHDTEMQKCHSASRRCCGRECGRALACGNHTCSLLCHLYSHDPNHPNVPYTCRPCNVECTVPRPTQCPHKCPKRGCHPGPCPPCEILERIKCYCGVTELYLRCRELSTATEELLSCKQQCPKLLNCKHRCKSICHKGPCGENQVCTKKTKIHCPCGNIKKEAPCNSVRNSEISLVCDDSCESKKQAEKLEREREAKRIKELEEEKNRKELAEYEWKLSGKKKKYKEKKVIVNQDDRNFVQKYWVAILSIIGLILSGVFYMVYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00711494;
- 90% Identity
- iTF_00711494;
- 80% Identity
- -