Ehec013919.1
Basic Information
- Insect
- Eurema hecabe
- Gene Symbol
- -
- Assembly
- GCA_026213755.1
- Location
- JADANM010001810.1:10132078-10140741[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00042 0.031 15.2 6.6 1 23 524 547 524 547 0.97 2 12 0.0031 0.23 12.4 1.0 1 23 552 576 552 576 0.92 3 12 0.00042 0.031 15.2 6.6 1 23 1094 1117 1094 1117 0.97 4 12 0.0031 0.23 12.4 1.0 1 23 1122 1146 1122 1146 0.92 5 12 0.002 0.15 13.1 0.1 2 22 1197 1217 1196 1217 0.95 6 12 0.0003 0.022 15.6 0.8 1 23 1269 1290 1269 1290 0.98 7 12 1.8e-06 0.00013 22.6 0.4 1 23 1296 1319 1296 1319 0.96 8 12 0.012 0.87 10.6 0.9 2 19 1337 1354 1336 1355 0.96 9 12 0.024 1.8 9.7 0.7 2 23 1364 1387 1363 1387 0.92 10 12 0.023 1.7 9.7 4.6 1 20 1393 1412 1393 1415 0.96 11 12 0.053 3.9 8.6 2.8 3 21 1423 1441 1421 1446 0.92 12 12 1.3 98 4.2 1.8 1 23 1452 1475 1452 1475 0.95
Sequence Information
- Coding Sequence
- ATGCTGTCCCCACACGACGACGACGACGATAATCATCTTTGCATCAAGTGTAACGAAACAATCATAGGTCTCGACAATTATGTGAAGCACCGGAAGGCGGGGTGTAGCAAATTAAAAAATGTAGATAAATCTGTCCTCCCAAGTATTGACCCATTGGAACCCTCTTACAGTCTCGGCGCTGATGTATTTTTCCAGTCATTAGAACTTCAAAGTAGCGTTAAAAAATCATCTTCCTCTAGACTGACGCCTCCTACACCCATATACAAAACTAGTTCAGATAGGAAGAACAGTTTGAAGATCGCTTCGTCATCGCGAGATATTCCACGCATGAGCCCTTTAGAAAATAACTTGAGAGGTGAAGACTGGATCGGTGGGCACAGCTTGAAGATAGAAACAAGTGAGGACAATCAGATGAAATTAATTAACGCAGTTGCAAGTATCAGCGGTGCCGCTAAGAAAATTCTCCCAACATCATCGTATAGCATAAACACGTATAATGACTTCAAGGGTGAAGATGATATGGAAGAATCTGACGATTCAGAAGATGAAGATGAAGATGAAACTACTCATGGGACAAAATGGAAACCACCTCCAAATTACACTGGTGGCAAATGGCGACCAGCTTCTCCAGATCATGACGAATGGGAGCGGCTCAGTATGGATGGACACGATCGAGAAGACGATTACGATGCACCTCCTCCTGATCACACTAAAGGCAAATGGGTACCGGGACAAGATAAAACTCAAATAATGCAAACAACGATACAATCCAAGGGTTCCGTTCAATATTGGTGCGGGCCGTGCAACCGTCGACTTGGCTCGCGAGCGATCTACGACAAGCATCTGATGTCTAACTTGCATATGCGAAAGGTCTTACCAGAACATGAGTTGGAGTTCGCCGGTCATTTAGAACCGATAAGAAACGTAGCAGAGAAACGTGCTACTAGATCAACTATTTTTAACAATGACAGCATATACACTCAGTTAAAAAGAAAAAAACAGAAATCAATAGATGATAAGACAATAACAAAAAAGAAAAGAAAGAGAAAACCGATGTTCGTTCAATGTTCTGGGTGCAAATCTCGGGTCAGAATGCACTTGATGGGAAAGCATTTAATATCACACTATCATTTTAGAAAAGCGACAGATATGCAGAGCGATGATTATAAACAACTTATTTTGAATAATATGGATGCGGTGGTACATCAATCCCCGTTTCAATGTAGCCCATGTAAATTTTACACCAACTGGCTATCGAATTTCATGCAGCATTGGTATTCTGAAGACCACGAGTGGAAAGTATCATCAATGACGGGCAGATTTTGGTGTTCATTTTGCAAATTTGAATGCGAAACGTCTCAAGAGATGCTCGACCACCTAACGAGCTCGGAACACAGCGAAGTCGTAGCAGTTATAAATAGATCTATGCCGATTATTATAAGGAAGAAAACGGTAATCAAATGCGATACATGCTGCAAAGAGTTTCGATATAATATAGAAGTGAAGGAACATTGCAAGAAAACTGGACATGAGGTGACAAACTCCGCAACTGACCTGTATCAAGAACTCCACAAATGCCAGCAGTGCAAGAAGAAATTTAAGACCTCTGTGTCTCTATGCGCTCATTTGAAATCTGAACACAAAGCAAAGGTTTTCTTCTGTCTCGTGTGCTCCAAGGTTTTTAATTCCTCATCAGAGGCTAAACAACACCGACAGACATCAGAACACAGAGTGCGAACCAAGGAGAAGTTGATAGCGCGAGGACTTTGCTCTAAAGACTTGCGCAAAAAATGCCCTTACTGTCCCGGAAAAGTTCTTTTAAAAAATGTTATCGAATTACGAGACCACGTGCAGCGTATACATCCTAACATAAAGAAAAATCTCGGCGCTGATGTATTTTTCCAGTCATTAGAACTTCAAAGTAGTGTCAAAAAATCATCTTCCTCTAGACTGACGCCTCCTACACCCATATACAAAACTAGTTCAGATAGGAAGAACAGTTTGAAGATCGCTTCGTCATCGCGAGATATTCCACGCATGAGCCCTTTAGAGAATAACTTGAGAGGTGAAGACTGGATCGGTGGGCACAGCTTGAAGATAGAAACAAGTGAGGACAATCAGATGAAATTAATTAACGCAGTTGCAAGTATCAGCGGTGCCGCTAAGAAAATTCTCCCAACATCATCGTATAGCATAAACACGTATAATGACTTCAAGGGTGAAGATGATATGGAAGAATCTGACGATTCAGAAGATGAAGATGAAGATGAAACTACTCATGGGACAAAATGGAAACCGCCTCCAAATTACACTGGTGGCAAATGGCGGCCAGCTTCTCCAGATCATGACGAATGGGAGCGGCTCAGTATGGATGGACACGATCGAGAAGACGATTATGATGCACCTCCTCCTGATCACACTAAAGGCAAATGGGTACCAGGACAAGATAAAACTCAAATAATGCAAACAACGATACAATCCAAGGGTTCCGTTCAATATTGGTGCGGGCCGTGCAACCGTCGACTTGGCTCGCGAGCGATCTACGACAAGCATCTAATGTCTAACTTGCACATGCGAAAGGTCTTACCAGAACATGAGTTGGAGTTCGCCGGTCATTTAGAACCGATAAGAAACGTAGCAGAGAAACGTGCTACAAGATCGACTTTATTTAACAGTGACAGCATATACACTCAGTTAAAAAGAAAAAAACATAAATCAATCGATGATAAGACTATAACAAAAAAGAAAAGAAAGAGAAAACCAATGTTCGTTCAATGTTCTGGTTGCAAATCTCGGGTTAGAATGCACTTGATGGGAAAGCATTTAATATCACACTATCATTTTAGAAAAGCGACTGATATGCAGAGCGATGATTACAAACAACTTATTTTGAATAATATGGATGCAGTGGTACATCAGTCCCCCTTTCAATGCAGCCCGTGTAAATTTTACACCAACTGGCTATCGAATTTCATGCAGCATTGGTATTCTGAAGACCACGAGCGGAAAGTATCGTCAATGACGGGCAGATTTTGGTGTTCTTTTTGCAAATTTGAATGCGAAACGTCTCAAGAGATGCTCGACCACCTATCGAGCTCAGAACACAGCGAAGTCGTAGCAGTTATAAATAGATCTATGCCGATTATTATCAGGAAGAAAACGGTTATAAAATGCGACACATGCTGCAAAGAATTCCGGTATAATATAGAAGTGAAGGAACATTGTAAGAAAACTGGACATGAGGTGACAAACTCCGCAACTGACCTGTATCAAGAACTCCACAAATGCCAGCAATGCAAGAAGAAATTCAAGACCTCTGTGTCTCTATGCGCTCATTTGAAATCTGAACACAAAGCGAAGGTTTTCTTCTGTCTCGTATGCTCCAAGGTTTTTAATTCCTCATCAGAGGCTAAACAACACCGACAGACGTCAGAACACAGAGTGCGAACCAAGGAGAAGTTGATAGCACGAGGGCTTTGCTCCAAAGACTTGCGCAAAAAATGCCCTTATTGTCCCGGAAAAGTTCTTTTAAAAAATGTTATCGAATTACGAGACCACGTGCAGCGTATACATCCTAACATAAAGAAAAAATGCGCCAAGTGTGGAAAAGCGTTCACATTACCTCAAGAGGTAACGCAACACATTCGAAGCAACGCCTGTCAATTTATGGAGCCTCATGCCATGAGCTCAGGTCTTTGGAACTGCAGCCAATGCCTCTTCACCACAGACTCTCAAGCCGAATGCTTCTTCCACGAAGTCTTGCACACGGCACCAATATCCCAAGACCCTAATAAAAAGGCAAAATACCCATGTCCTTTGTGCACCAAAATCTTCAGTAAAAAATCTTTAAGAGAACATTTACGACAACACACTTTTGAAAGGCCATTCGCGTGTCCAACCTGCGGTGCTAACTTCACCAGACAAAGTAGTCTGAGTAACCATATGAAGGTGAAACATGACACACAAATGAGTCAGCCTGTTCCCGATAAAGCAAAGACCACAGACATCAAATGCGGTAAATGTAAAAAGAAGTTTCAGGACGAGACCGAATTACAGAAACACTCTCCTATATGCCAAGTATTTCAACTGGAATGCTCTGAAGAACAATGCACATTTATTGCTAGTTCACAATCACAATTGTTTAGGCACCGACGAAGCCATGGAATCGCAAAGATTCACGAGTGTACAGAATGCGGTTTTAAAACTGATCAAGTTAGTCACCTAAAAAGACATATGGTATGTCATAAAGGAGAGAAGCCTTATGGTTGTCCACATTGCAACTTCACGTGCGGAAGCTTGGAAAATCTTCGAAAACATGTGCTTAAAGGCAAGAAACATCCTGGACTGTTTCTGTATCACTGCAAGTCTTGCGATTTTAAGACTAACTTAGCCACCGCACTACGGATTCACTACATTTCACAGCATCCTAATAAATATACAGCGAAGAGTGCTATTGAGGAAGTTAAAAATCACTTGAGAGTTTTATAA
- Protein Sequence
- MLSPHDDDDDNHLCIKCNETIIGLDNYVKHRKAGCSKLKNVDKSVLPSIDPLEPSYSLGADVFFQSLELQSSVKKSSSSRLTPPTPIYKTSSDRKNSLKIASSSRDIPRMSPLENNLRGEDWIGGHSLKIETSEDNQMKLINAVASISGAAKKILPTSSYSINTYNDFKGEDDMEESDDSEDEDEDETTHGTKWKPPPNYTGGKWRPASPDHDEWERLSMDGHDREDDYDAPPPDHTKGKWVPGQDKTQIMQTTIQSKGSVQYWCGPCNRRLGSRAIYDKHLMSNLHMRKVLPEHELEFAGHLEPIRNVAEKRATRSTIFNNDSIYTQLKRKKQKSIDDKTITKKKRKRKPMFVQCSGCKSRVRMHLMGKHLISHYHFRKATDMQSDDYKQLILNNMDAVVHQSPFQCSPCKFYTNWLSNFMQHWYSEDHEWKVSSMTGRFWCSFCKFECETSQEMLDHLTSSEHSEVVAVINRSMPIIIRKKTVIKCDTCCKEFRYNIEVKEHCKKTGHEVTNSATDLYQELHKCQQCKKKFKTSVSLCAHLKSEHKAKVFFCLVCSKVFNSSSEAKQHRQTSEHRVRTKEKLIARGLCSKDLRKKCPYCPGKVLLKNVIELRDHVQRIHPNIKKNLGADVFFQSLELQSSVKKSSSSRLTPPTPIYKTSSDRKNSLKIASSSRDIPRMSPLENNLRGEDWIGGHSLKIETSEDNQMKLINAVASISGAAKKILPTSSYSINTYNDFKGEDDMEESDDSEDEDEDETTHGTKWKPPPNYTGGKWRPASPDHDEWERLSMDGHDREDDYDAPPPDHTKGKWVPGQDKTQIMQTTIQSKGSVQYWCGPCNRRLGSRAIYDKHLMSNLHMRKVLPEHELEFAGHLEPIRNVAEKRATRSTLFNSDSIYTQLKRKKHKSIDDKTITKKKRKRKPMFVQCSGCKSRVRMHLMGKHLISHYHFRKATDMQSDDYKQLILNNMDAVVHQSPFQCSPCKFYTNWLSNFMQHWYSEDHERKVSSMTGRFWCSFCKFECETSQEMLDHLSSSEHSEVVAVINRSMPIIIRKKTVIKCDTCCKEFRYNIEVKEHCKKTGHEVTNSATDLYQELHKCQQCKKKFKTSVSLCAHLKSEHKAKVFFCLVCSKVFNSSSEAKQHRQTSEHRVRTKEKLIARGLCSKDLRKKCPYCPGKVLLKNVIELRDHVQRIHPNIKKKCAKCGKAFTLPQEVTQHIRSNACQFMEPHAMSSGLWNCSQCLFTTDSQAECFFHEVLHTAPISQDPNKKAKYPCPLCTKIFSKKSLREHLRQHTFERPFACPTCGANFTRQSSLSNHMKVKHDTQMSQPVPDKAKTTDIKCGKCKKKFQDETELQKHSPICQVFQLECSEEQCTFIASSQSQLFRHRRSHGIAKIHECTECGFKTDQVSHLKRHMVCHKGEKPYGCPHCNFTCGSLENLRKHVLKGKKHPGLFLYHCKSCDFKTNLATALRIHYISQHPNKYTAKSAIEEVKNHLRVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -