Basic Information

Insect: Eurema hecabe
Gene Symbol: -
Assembly: GCA_026213755.1
Location: JADANM010005620.1:4658191-4667779[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.11 8 7.6 1.2 1 23 286 308 286 308 0.98

2 9 0.0005 0.037 14.9 1.6 1 23 315 337 315 337 0.97

3 9 0.00026 0.019 15.8 0.1 3 23 371 392 370 392 0.97

4 9 4.3e-05 0.0032 18.3 1.4 1 23 400 422 400 422 0.97

5 9 1e-05 0.00075 20.3 0.4 1 23 427 449 427 449 0.99

6 9 0.00092 0.068 14.1 2.1 1 21 456 476 456 481 0.93

7 9 0.00017 0.013 16.4 0.8 1 23 486 508 486 508 0.97

8 9 0.0004 0.029 15.3 3.0 1 23 513 535 513 535 0.99

9 9 0.0019 0.14 13.1 0.6 2 21 545 564 545 565 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.11	8	7.6	1.2	1	23	286	308	286	308	0.98
2	9	0.0005	0.037	14.9	1.6	1	23	315	337	315	337	0.97
3	9	0.00026	0.019	15.8	0.1	3	23	371	392	370	392	0.97
4	9	4.3e-05	0.0032	18.3	1.4	1	23	400	422	400	422	0.97
5	9	1e-05	0.00075	20.3	0.4	1	23	427	449	427	449	0.99
6	9	0.00092	0.068	14.1	2.1	1	21	456	476	456	481	0.93
7	9	0.00017	0.013	16.4	0.8	1	23	486	508	486	508	0.97
8	9	0.0004	0.029	15.3	3.0	1	23	513	535	513	535	0.99
9	9	0.0019	0.14	13.1	0.6	2	21	545	564	545	565	0.95

Sequence Information

Coding Sequence: ATGTCATCCTTTTTGTGTTTCATCTGCCATAGCACAGTAAACTCTGAAACAAATGAAGAAACACGAGAAAAATACAAAGAAGTTGTGGGTATTCATCTGTGTCCAGACTCCCATCTGTGTTATATCTGCTGTCACGTTCTCCACAAGCTGTTCATGTATCGGTCCGTCTGTCTGAAACGGAGCTTGGAATATCCTGTGTTATTTAGTGAGAAAGGAACGATAAATCTTCACAGAAGTGACATAGAAATAACAGTACTATGTCCAGATGATTGCGATCAATTCGAGCCAAAACAATATTACTCGACCGACTATCATGAAGACAATTACAATATAAATAATGAATACTTCAATGATTACGTTCATACTAATGATAATTATACTCACGATAATGATAACGATACAGCAATTAATGATAATGATTTGACGTACGACAATGTTAATGATGGTATGAACGACAATCAATTTGATGATATCCACAATATGGATGTTAAGTCTGTTAATAATGATGTTATTGAAAATAATGATAATGATAAATTTGAAACGGAAGTGTCTAACGAAAATAACAATGAAATTGATGATGAAACAGATAAAAATGATTTAAATGAGAAAAATGATAATTTTAATAATATAGCAGTAAATTTGATAGAACATGAAGAATTTAATATGAATAACATTAAAGATGATGTAGAATTCAAAGATGATGAGAATGGTTTAAGTGCAGACAAATCAGATGAGAGTTTTGTTAGAAGGAGAAAAGTGAAGAAGAAGGGGTTCAAGAAGATAGTTCGTACGTTAGAAGAGCAGAAGAAGCAGTTAGAAAGAAATAGAAAGAATAAGAAGTATATAGAAGCAGAGTTTAAATGTTACAATTGTGCGTTGGGTTTTCTCTTCAAGGACACATACCAGGCTCATATGATGCGGCATGAAGAGTCAAACGGTTCATACCGTTGTGATACGTGTTCACTTCGATTCTCGACTCACGCTTTGCTACGAACTCACGCAGCGTCGCACGCGCATATGTACAAGTGTCTTACGTGCGGTGACGTCATCGGCCCGAGAGCGAGACGGACGCACGCCTGCGTTTCTACTAGAGTGAAAGAGAGCGTGGCGTGTCCTCAGTGCGGGAATTTGTTTAGAGACGCAAACGGTTTACAACAACATATTCGGCGGGTTCATGCTAAGACATCGAACCGGATCCACTCCTGCGCTGTGTGTAACGAGAACTTCACCAATCAGTCCGTGCTCAGGACGCATATGATAAAACATATAAAACGCAAGTTCCAATGCGATGTATGCCCAAGAATATATAGCAGTCCATACACGTTAGCGCAGCACAAGAAAACCCACGGAATTCCCGTAGAGAGGCATTGCTGTACCGATTGTGATGCGGTTTATACGACACGAAAAAGTCTCTTAGCACATCGGAGGAACAGCCTGGCTCATCAGAACACTGTTTTCGAGTGCCCCGTATGCCCGCGTGTATGTGCCTCGCAGAGTGCACTTTTATTGCACTCGCACACACACTCACCGGCTCGATACGAGTGCACTCGCTGCACCAACACGTACAACTCGCGCAAGTCACTGGTGCGCCACTTGCGCAAGCACGACGGGACAGTAGCTGGCTCGATTGCTGTGTGTCATGTATGCGGGAGTAGCTTTAAAGGTACAAATAAGCTAAACAGGCATCTTCGGGAAAACTGTGAAAAGGCAAAATTGGAGGACCATTTGACTTCCATGTATGAATAA
Protein Sequence: MSSFLCFICHSTVNSETNEETREKYKEVVGIHLCPDSHLCYICCHVLHKLFMYRSVCLKRSLEYPVLFSEKGTINLHRSDIEITVLCPDDCDQFEPKQYYSTDYHEDNYNINNEYFNDYVHTNDNYTHDNDNDTAINDNDLTYDNVNDGMNDNQFDDIHNMDVKSVNNDVIENNDNDKFETEVSNENNNEIDDETDKNDLNEKNDNFNNIAVNLIEHEEFNMNNIKDDVEFKDDENGLSADKSDESFVRRRKVKKKGFKKIVRTLEEQKKQLERNRKNKKYIEAEFKCYNCALGFLFKDTYQAHMMRHEESNGSYRCDTCSLRFSTHALLRTHAASHAHMYKCLTCGDVIGPRARRTHACVSTRVKESVACPQCGNLFRDANGLQQHIRRVHAKTSNRIHSCAVCNENFTNQSVLRTHMIKHIKRKFQCDVCPRIYSSPYTLAQHKKTHGIPVERHCCTDCDAVYTTRKSLLAHRRNSLAHQNTVFECPVCPRVCASQSALLLHSHTHSPARYECTRCTNTYNSRKSLVRHLRKHDGTVAGSIAVCHVCGSSFKGTNKLNRHLRENCEKAKLEDHLTSMYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -