Ehec002700.1
Basic Information
- Insect
- Eurema hecabe
- Gene Symbol
- -
- Assembly
- GCA_026213755.1
- Location
- JADANM010000147.1:6491758-6494486[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.025 1.8 9.6 0.2 5 23 354 372 353 372 0.96 2 11 0.055 4 8.5 0.3 3 23 380 400 378 400 0.90 3 11 0.04 2.9 9.0 0.3 2 23 408 429 407 429 0.94 4 11 8e-08 5.9e-06 26.9 1.0 2 23 434 455 434 455 0.98 5 11 6.3e-05 0.0046 17.8 1.7 1 23 461 483 461 483 0.98 6 11 0.0008 0.059 14.3 0.1 2 20 488 506 487 507 0.94 7 11 0.00062 0.046 14.6 0.3 1 23 541 564 541 564 0.96 8 11 1.7e-05 0.0013 19.6 0.4 1 23 581 603 581 603 0.98 9 11 7.1e-05 0.0052 17.6 4.5 1 23 609 631 609 631 0.98 10 11 0.0026 0.19 12.7 0.3 3 23 639 659 637 659 0.98 11 11 1.5e-05 0.0011 19.7 0.8 1 23 665 688 665 688 0.96
Sequence Information
- Coding Sequence
- ATGGAATCGTGGTCGGATTTATGTCGATGCTGTCTTTCGCCGGACACAACCGTGTCAATATTAGACAACATTGAGAATGTGAGAGATAAGTTTTTGGAAACAACAACGATAGAGGTTACAGAGGATGATAGATTACCACAAAGACTGTGCAATGATTGCTTCACAATAATGAATACAGCTCACCAGTTCAGAGAGCAATGCCTAAAGATGGATAAAGAACTAAAAACCCAACTAGACACAGTACCGGAAGATATAAAGGAAGAATTGTTGTCACAAATAGAAAGGCATGCAAATAGCAGTATGTCAGATGAGGATAAAGCAAAAGAATCTATGAAAAAATTGGAATCTATGATCAAAATTGAACCCATGGAAGATGATGATTACTACTATGTCTTAGTTATTGACGATCCTAAAGATGAAGATAAAAATAAACCAATGCCCCTGCCACAAGTTATTAAGAAAGAACTAGAGCCATATGACGAAATTAATGATTGCATGCAAAATGAGGATTCTAATTCCCAAAATACAAACGAAAATGACTTTGTGATGCAAAATGATGCAATAGACTCATTTGATTCATTCTTACTGTCCAATACAAAAGTGCCGGCTAGCGTTCCTGAAACAATACTGGAAAATGAAGAGGGACACGAGAATGAAGTGGATTTTGTTAACGCTCTAGATATTGTTGATTCAAATGATGATCCATCAGTTATAACTATCGACAATGCAACGGATAAAAATAATCCTATAACTGTCACTCTAGCTGATGGAATGAAAGAGTTTAATCCAAGAAATCTTATCAAAATCGTCACTCCTTCAGGTCTTGAAAAGACTATTCTATTAAAAAATGATGAAAACGTTAAATTCTTGACAGATTCACAGGAGGAGTCAAATGAAAATGATGATAATATGTCCCAAGAAGAAATTATATTGTGTGAAGGAGATGATAATTCCCAATTCCAAATATTGAAAGTGGATGGATCTGAATTTGTGATTGAATATACTGATGAAGGCCAAATCGCGACTGTATTGCAGCAAGAAGATGGAACATTTCTGTGCGATTGCGGAGAACAGTTTGAAGACTTAGCTGAGTTTGAAAAACATCAATACAAGCATAACCCAGCTGGAGAACATTTGTGTAACTTGTGTGGCAAAGGGTTCGAAACTGCTGAAATTTTAACTGGACACACATTACTGCACAGATCTACGGGCCCCGTCGTTTCCTGCCCTTTCTGTAACCAAGTAGTAAGGAGAAATGCATTAACCCAACATATCAAGTACACCCACAACACAAAACCACAATGTGAAATTTGCCAAAAGACATTCGCGAATCAGAATAACCTAAAACGGCATATGATGATACACAGCGGCATCAAGGAATTCGTTTGCGACATATGCTCTAAACGGTTCAATCAAAAAATCACAATGCAAACGCACAGACTAACACATATTAACTCAACGACTTGCAATTACTGTGACACTGTGTTCGAAGACAAAGCAGCTCTGACGATGCACAAAGAGTTTAACGAATGTAATCGGTCAAAAATAATTCGTGTCAAAGAAGAGTTGATGAAAACAGTTAGGCAAGAGGTGACCACGAATTTAGGCAAGTTATTAGGGTATGCGTGCTCGCTATGTAAAAAGATGTTTTCCTTAGAGTCAGCGTTGGATCAACATATAGAAAAGACACATATCATAGAGACTTTGGAAGATAAGAAAGGTCATAAGCAGATGAAGAGGTTTGAATGTACTATCTGTGGAAAGAGATGTGCGAGCCAGGCCATGTTAATTATGCATGAGAGAGTACATACTAATGAGAGGCCGTTTCCCTGCCAACTTTGTTCTTTGCGTTTCAAAACTAAGACACATTTACGGACACATCAATTAACTCATACGAGGGAAAAGAAGTTTGGATGTTCCGTTTGTATGAAATTCTTTGCCCTTAAAGGTAATTTAGTTGTACATCTACGAACTCATACAGGAGAACGACCATATGTTTGCACGCTATGTGGAGAAGCCTTCATTGATTCTAAATACCTTAAGAAGCATAAATTGAGGAAACATGCCATTGATAATATGCCATGGAATAAGTATTGA
- Protein Sequence
- MESWSDLCRCCLSPDTTVSILDNIENVRDKFLETTTIEVTEDDRLPQRLCNDCFTIMNTAHQFREQCLKMDKELKTQLDTVPEDIKEELLSQIERHANSSMSDEDKAKESMKKLESMIKIEPMEDDDYYYVLVIDDPKDEDKNKPMPLPQVIKKELEPYDEINDCMQNEDSNSQNTNENDFVMQNDAIDSFDSFLLSNTKVPASVPETILENEEGHENEVDFVNALDIVDSNDDPSVITIDNATDKNNPITVTLADGMKEFNPRNLIKIVTPSGLEKTILLKNDENVKFLTDSQEESNENDDNMSQEEIILCEGDDNSQFQILKVDGSEFVIEYTDEGQIATVLQQEDGTFLCDCGEQFEDLAEFEKHQYKHNPAGEHLCNLCGKGFETAEILTGHTLLHRSTGPVVSCPFCNQVVRRNALTQHIKYTHNTKPQCEICQKTFANQNNLKRHMMIHSGIKEFVCDICSKRFNQKITMQTHRLTHINSTTCNYCDTVFEDKAALTMHKEFNECNRSKIIRVKEELMKTVRQEVTTNLGKLLGYACSLCKKMFSLESALDQHIEKTHIIETLEDKKGHKQMKRFECTICGKRCASQAMLIMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCTLCGEAFIDSKYLKKHKLRKHAIDNMPWNKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00358850;
- 90% Identity
- iTF_00711200;
- 80% Identity
- -