Ehec014685.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eurema hecabe
Gene Symbol
-
Assembly
GCA_026213755.1
Location
JADANM010005719.1:1909705-1915214[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.00069 0.051 14.5 6.1 1 23 130 152 130 152 0.99
2 17 9.2e-05 0.0068 17.2 1.4 3 19 158 174 157 177 0.93
3 17 2e-05 0.0015 19.3 0.1 1 23 221 243 221 243 0.99
4 17 1.4e-05 0.0011 19.8 4.8 1 23 251 273 251 273 0.98
5 17 1.2e-05 0.0009 20.0 4.1 1 23 279 301 279 301 0.97
6 17 8.3e-07 6.1e-05 23.7 4.9 1 23 307 329 307 329 0.98
7 17 9.7e-08 7.1e-06 26.6 1.3 1 23 335 357 335 357 0.95
8 17 0.064 4.7 8.3 4.9 3 23 368 390 363 390 0.70
9 17 1.4e-05 0.0011 19.8 4.8 1 23 398 420 398 420 0.98
10 17 1.2e-05 0.0009 20.0 4.1 1 23 426 448 426 448 0.97
11 17 8.3e-07 6.1e-05 23.7 4.9 1 23 454 476 454 476 0.98
12 17 9.7e-08 7.1e-06 26.6 1.3 1 23 482 504 482 504 0.95
13 17 4.2e-06 0.00031 21.5 3.0 1 23 510 532 510 532 0.98
14 17 5.4e-05 0.004 18.0 2.6 1 23 538 560 538 560 0.97
15 17 2.6e-05 0.0019 19.0 2.9 1 23 566 588 566 588 0.97
16 17 4.2e-07 3.1e-05 24.6 0.8 1 23 594 616 594 616 0.99
17 17 0.0053 0.39 11.7 3.1 1 20 622 641 622 644 0.94

Sequence Information

Coding Sequence
ATGGTTGACCTAACGAGCACTTGTCGTACTTGTATGAAAAGTAATGTAAACATGGTTGATATATTTGGGCCAGTGAAAATAGAAGAAAGTTGTCCACTTAAACTGTCTGATTTGTTAACGGAGACAACTTCCCTAGAAGTTGCTATAGAAGACGGCTTACCGCAAACTCTTTGTGATACTTGCGTTAATACGTTACAAATAGTCTACGCATTTAGGCTCCAAGCTGTACAAGTAGAATCGGAGTTAAAAAAACTCCTTTACAACACTCCAATTAAAAATGAAAAACATGAAGTAGATATTAAAGCAGAAGGTTCAGATTACTTGGAAGAGTTTGACGATTACTTAGACACTATGGTGCCCAAGGAAGAGCTTGGTCTTGAAGAAATATATGAATGCAAGATATGTAATAAACAGTATAATACTCACAAAAAGTATACAAAGCATTTGTCCACTCACGAAACAAATGTGGCTTGCCCAAAGTGTAAGAAAAAATTTCGTAAACAATCCTCACTAGAAAAACACTCATTAAAGTGTGTTTCAGACCAATATGATATAACCAAAACAAATATAGATAATAAATGTAAAGCAACCAATTGTGACTTAAGTTTTTCATTAGATAACAAAAACATTGATGAAAGATTTGAGAAAGAAAACAATGTCTATAAATGTCCTGAATGTGATGCAGCTTACGACAAACCTAGAGCTCTATTAACGCATATGAAGAAACATGATCGGAATAGCGGGGAGAAATTTAAGTGTGACCATTGTAATAAATTATTTTCACTAAAGACATTGTTGAGACGGCATATGAGGTTGCATATGGGACACAAACCTTTCAAATGTACTGAATGTACGAAAAGTTTCTCGAGAAAGGATCAATTGTCGTATCACAAGAATCAGCATAAAAATGAAAGGCCATATGTGTGTCCGCATTGTCAAAAATCCTTCACACAACAGTGTTCACTAAAAGCTCACACACGGATACACACGGGAGAAACGCCGTTCCTTTGCTGGGAATGCGGGAAGAGCTTTAACAATAAATCTAATTTACGACAACATCTCATGCGGCATGCCGGAGTCAAACCATTTCCTTGCAAACTTTGTCCAAAGTCATTCTGTACTAAAGCTTACGACAAACCTAGAGCTCTATTAACTCATATGAAGAAACATGATCGGAATAGCGGGGAGAAATTTAAGTGTGACCATTGTAATAAATTATTTTCACTAAAGACATTGTTGAGACGGCATATGAGGTTGCATATGGGACACAAGCCTTTCAAATGTACAGAATGTACAAAAAGTTTCTCAAGAAAAGATCAATTGTCGTATCACAAGAATCAGCATAAAAATGAAAGGCCATATGTGTGTCCGCATTGTCAAAAATCCTTCACACAACAGTGTTCACTAAAAGCTCACACACGGATACACACGGGAGAAACGCCGTTCCTTTGCTGGGAATGCGGGAAGAGCTTCAACAATAAATCTAATTTACGACAACACCTCATGCGGCATGCCGGAGTCAAACCATTTCCTTGCAAACTTTGTCCAAAGTCTTTCTGTACTAAGGGTCAAATGAAAAGTCACATGGACACACACACAGACGCTCACCCCTACAAGTGCAATGAGTGTAACTCGTCCTTCACAAAACAAACTTCTCTTAAAAAACACAGCCTCATTCACCTGGGAATTAAACAATttgcttgcgaaacatgcaacaggagATTCACAATCAAAGATCATTTAAAGAGACATGAAAGGGTACACACTGGTGAAAAGCCCTATAAGTGCACATATTGTGAACGGGCGTTCACTCAGAGCGGGGATCTCGTTAAACACACTCGTATTCACGTTGGACAGAATTTATACCAATGTGACATATGCCACATAAGATTCCGCTTACTAAGAGACCTGAAACACCACTATCCGTCACACTACAATGAGAGCAAAAGGAATGACATCACTCCCAACATGCCGTCTGACGTCACGTGCACTGACGTCACATGTTCTGACGTCACGAAGGAAGATGGCAGGATAACCATTACCTTCAGCAACCTGCTAGATAAGAGCAACGGGGATATCACAATAAATATATCTCCAGAGAAGATTTAA
Protein Sequence
MVDLTSTCRTCMKSNVNMVDIFGPVKIEESCPLKLSDLLTETTSLEVAIEDGLPQTLCDTCVNTLQIVYAFRLQAVQVESELKKLLYNTPIKNEKHEVDIKAEGSDYLEEFDDYLDTMVPKEELGLEEIYECKICNKQYNTHKKYTKHLSTHETNVACPKCKKKFRKQSSLEKHSLKCVSDQYDITKTNIDNKCKATNCDLSFSLDNKNIDERFEKENNVYKCPECDAAYDKPRALLTHMKKHDRNSGEKFKCDHCNKLFSLKTLLRRHMRLHMGHKPFKCTECTKSFSRKDQLSYHKNQHKNERPYVCPHCQKSFTQQCSLKAHTRIHTGETPFLCWECGKSFNNKSNLRQHLMRHAGVKPFPCKLCPKSFCTKAYDKPRALLTHMKKHDRNSGEKFKCDHCNKLFSLKTLLRRHMRLHMGHKPFKCTECTKSFSRKDQLSYHKNQHKNERPYVCPHCQKSFTQQCSLKAHTRIHTGETPFLCWECGKSFNNKSNLRQHLMRHAGVKPFPCKLCPKSFCTKGQMKSHMDTHTDAHPYKCNECNSSFTKQTSLKKHSLIHLGIKQFACETCNRRFTIKDHLKRHERVHTGEKPYKCTYCERAFTQSGDLVKHTRIHVGQNLYQCDICHIRFRLLRDLKHHYPSHYNESKRNDITPNMPSDVTCTDVTCSDVTKEDGRITITFSNLLDKSNGDITINISPEKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-