Basic Information

Gene Symbol
pnr
Assembly
GCA_905147225.1
Location
LR990103.1:22909771-22914071[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-16 4.7e-13 49.4 3.3 1 35 481 514 481 515 0.97
2 2 9.7e-18 3.4e-14 53.1 7.5 1 35 542 575 542 576 0.97

Sequence Information

Coding Sequence
ATGGAAAACGTACCGCAAATGGAACAGCAGCGTGAAGAGCAATCCGTGGAGGCTTTACAGCTCGTCAAGAATGAGGAGCGTCTTGAACAGCAAACGGATTCTGGGGCAGCATCAAACACTGGGGCGGCAGCAGATGCAGCTGGGACACCGAGGGTGGAGAACACGGACCAGCAACAGAACTCAATGCGCGACGCCTCTCCGGCGCCACACTCACACTCTGTGATCACGTCACGTCGTGCGGTGAGGACCATCACTGCTGCAGGGCACATCACTACGGACGAAACTGGTGAGCTCGCCACAGACGATGGAGTTAAGGATGAACCGCCTGAGACGACGGCACTAGAGCACGAGCCACACCAGCTACACCATTACGCACCCAAACTTGAGGAGGGTACAGAGCCACGTGACATGCACCAACACTATGATGAGGAGAGGCTGCGTATGGCTGAGGCTGAGACCGCTAGATACCTTGCTTTTAAACAGGAGCCATATCGTTCACAAGCATCACCAATGCCAGCGGACAAACGTTTGCAACCCCAATACAGACCCGCACCGCAACGCCCAGGATACGGGCGTGGCTTGTCACTTCGTTACGGTGCGCCGCACCATGTCATTGTAGCTCAAGAGGGTGAGATGGAAGAAGGGGCACATGATGCCTTCCTAGCTCACAAGGATAAGGAACAGTTACAGTACGCAGGAAATGAAGGGACCCCTGCCGATGCCCGTCAATATGCAGCAGTGTTAGGAGATCAAGTGGCAGCTTCCACTGCACTTGAAATGATTCAGACAACGTCGTTACATAACCAGCAGTCTGTAGGTGTTGCATACCAGCAGGTGAAGTATGAGACCCGAGGTGAAGGTGAGCCTCGACCGAGCACATATGCCAGCCTACAACCAGTCACATCTGTGCACGGCGGCTACACATATGCAGGACAAAGTCCGCAGTATGCTGGAGCTGCTGCGTATGCCTCTTATGCTGGTGGCAGCAAGGAATTGTTGACGCTCTACGGAGGTGTAACGGGAGGGGGAGCAACAGGAGGAAGTGCAGGTGGAGGCCCACGGGGCGATGAGTCTCCCCCCGGTCAACTGCTGTACCGTTCTGACCCCACGCTCTCCTCATCATCGCTGACTGCCCGAGGGGCGCATGTAGTGTATGGCTCAGTGGTACCACAATCACAAGCAGTTTACGAGGCACCACCTAGTCCAAATTCACAGCAGGTTACGTTATATACTCATGGCAACACTGTCCAGTACAAGGTAGGCGGAGAGCATTACTTGGGCCAGGGCGGTGGTGTGGAGTATGTACCTGTGTCAGGGTACGAAGGTGGTCTACTAGTGGAGGGTTATCCAGCACCTACTCAAGGATGGCCCGCGCATAATTTACTGCCAATAGACGACGGATTTGATCCCAGTATGGCGGGTATGGGTGATGTGAAGGAGTGCGTGAACTGTGCAGCCGCGACGACTCCTCTCTGGCGACGTGATGGAACAGGACACTATTTGTGCAATGCCTGCGGGCTGTACACCAGGATCAACGGAGTGAACAGACCACCACTCAAAGGGCAAAAAGCGAAGCCTCAACAAGCGCTGCCAACTAATGGCAATCGCAGAGTAGGAGTGACTTGTGCCAACTGCCGCACTTCCAACACTACTCTGTGGCGAAGGAACAACAACGGCGAGCCTGTCTGCAACGCCTGCGGTCTCTACTACAAGCTACACAACGTAAACAGACCGCTGAGTATGAAGAAGGACGGCATACAGACGAGGAAGAGGAAGCCTAAGAGCATGGGAGGCGGACACACCGTGCCACGGCCTGGCGGTGCTCCACTATCAGTGGAGGCACACACACATAAGGTGCTGCCTCCTCTGTACGCCGCGGTGGAGGCGGGGGGAGCGGGGAGTAGCGCGGGGGGCGGACCGCTGCTGCTACTGCCCTCCAGGCACCAAGCCGATATGGTATCAACGTTAGAACGCAGTGGGGTTGTGACAGGCTCCACACATTACCGCCCGCCATAA
Protein Sequence
MENVPQMEQQREEQSVEALQLVKNEERLEQQTDSGAASNTGAAADAAGTPRVENTDQQQNSMRDASPAPHSHSVITSRRAVRTITAAGHITTDETGELATDDGVKDEPPETTALEHEPHQLHHYAPKLEEGTEPRDMHQHYDEERLRMAEAETARYLAFKQEPYRSQASPMPADKRLQPQYRPAPQRPGYGRGLSLRYGAPHHVIVAQEGEMEEGAHDAFLAHKDKEQLQYAGNEGTPADARQYAAVLGDQVAASTALEMIQTTSLHNQQSVGVAYQQVKYETRGEGEPRPSTYASLQPVTSVHGGYTYAGQSPQYAGAAAYASYAGGSKELLTLYGGVTGGGATGGSAGGGPRGDESPPGQLLYRSDPTLSSSSLTARGAHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVEGYPAPTQGWPAHNLLPIDDGFDPSMAGMGDVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHTVPRPGGAPLSVEAHTHKVLPPLYAAVEAGGAGSSAGGGPLLLLPSRHQADMVSTLERSGVVTGSTHYRPP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-