Esim003795.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990104.1:21856925-21874349[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.8e-05 0.0048 18.2 2.1 2 23 401 422 400 422 0.97 2 13 0.18 18 7.0 2.6 1 23 430 453 430 453 0.94 3 13 6 6e+02 2.2 2.2 1 23 457 480 457 480 0.92 4 13 0.0066 0.66 11.5 1.0 1 23 558 580 558 580 0.98 5 13 0.0048 0.48 11.9 3.1 2 23 589 611 588 611 0.96 6 13 2.6 2.6e+02 3.3 1.2 1 23 615 637 615 637 0.94 7 13 0.0018 0.18 13.2 2.0 1 23 642 665 642 665 0.97 8 13 0.0031 0.31 12.5 1.0 1 23 669 692 669 692 0.94 9 13 0.078 7.8 8.1 0.1 2 20 712 730 711 732 0.93 10 13 2.9 2.9e+02 3.2 0.1 2 23 785 807 784 807 0.94 11 13 2.7e-05 0.0027 19.0 2.0 1 23 816 838 816 838 0.98 12 13 0.3 30 6.3 0.7 3 23 846 866 844 866 0.95 13 13 0.03 3 9.4 2.8 1 23 872 895 872 895 0.96
Sequence Information
- Coding Sequence
- ATGACATGCCTGCTGCTCTATACACCCATAAAAGCTGGTAACTGGTCAGTTAGCCGCGATGAACTATCCCATCGCCGTGAGTCACCCCTGGCGCCTGCGCTCACGTCACGACACTGCACCGCCTGGGACGCATTTGCCAAGCCACAGACTTGCCCAGCATCTGTGGCTCCCTCTCGACATCGTCGACTTTACCCACAGAAGCGACAGATCACTACGTGTGGAGTCGATTTGGTTGCAGGAGTTGTCGACTCTTTCAGGTTGAACTTTACTGTCGCCTACGGTACTCCGGATCCATGCCCCATCCGCCAAATATACGCGGTACCAAAGACTTCTCCGCCGTGCTTGcttataaaaaaatcaaatctcaaagatttcaagcacactttattttatattaagccACCATTGTCATTTATGAGTACAGACAGACTACATCTTGAAAACACCAAGTTCCAATGGACTAAGCATAATAGAATAGCAAATAGTGATGTTAGCAACATGAATGAAGTGCCAAAACTGAACTGTTTTACATTAACATCGGATAACACATTAAATTCGGTAACAAATGCATCTTATTTAACTgaaaataatgatgataatatcaAAATGCTAGAAATTTCAAGTACAGATTTAGATGTAGACAACTGTTTAATCAAACCTGAACCTGAACCTCAAGCAAATGTTGACTTAGATACATTAACATCGAATGACACATTTAATTCGGTAACAAATGCATCTTATATAACTGAAAATAATGATGTTATTATCAAAGTGATAAAAAGTTCAAGTACAGATTTAGATGTAGACAACTGTTTAATCAAACCTGAACCTGAACCTCAAGCAAATGTTGACTTAGATACATTAACATCGAATGACACATTTAATTCGGTAACAAATGCATCTTATATAACTGAAAATAATgatgttattattaaagtgatAGAAAGTTCAAGTACAGATTTAGATATAGACAACAGTTTAATAGAACCTCAAGCAAATGTTGACATAATAGACTTTTTAAGTGATTATGAAGAGAAAGACGAAACAGATATagttaatgtaaaaaatatatcagaaaTAAATGAAGATCCTGTTGATGGATCTAATTTGGATCAAGAATATGCTATAATGATTCCTATATCAGTGAAGGAAGCTAAAGCCGCTGTTAAAGTATACAAATCATTCAGCTATGGAAGACTACATTGTAAGATTTGTAACAAACCATTTTACAATGAGAATAGACTGCAGGTTCACATGAGAATGCATGATACGcATTTCAGTGGTTCTTTTCACTGTGATATTTGTGATTTCTACTACAAAAGTGATTTGCTACTAAAGACCCATATGACTGAAAAACATATGTACAAATATCTATGCAGAAAATGTCCAGAAGTTAGTTTTCATAGGAGATCAGCAAAGCAGCACTACATTTCCTCACATTTACAAAAAGACGAGAGGTTGCACACTAAAGCGAACGGGTATGATGATATCCGACCAAATTGGTTGAGTAACAAGGGTAGGAAACAAGCTAAGGATGTGTCCACAGTGAAACCTACCAAAAAATCAAAGAAAGTACCAGATGACTTTTTAATTTACACACCCGTTCCACATGATGAGCAATATTCTCTAGTACTAGATAGACAAAACTCAAAGAATTATAAAAAGTCAAATTACAAGTGCAATTTGTGTTTTAGAGGTTTTCGTGAAACTGTGCCTTTTGAGAAGCACATGGCAAAACATGATCCGGCAATCTCTGGTCCGGTGCAGTGTGACATgtgtaaattacattttaagaATCTCAGAAAACTGTACAATCACATGAGCATGACACATCTGTCCAAGTATTCGTGTCAGATGTGCAGCTATGTATCTTACAACAGGCGTCAATCCGTGATACATTATCGGTGGCACAAGAATGTTACGTACCCCTGCCCCCACTGTACAATGGTGTTTAATAAATACTCAAGTCAACTGACACATATCCGACTAAAGCATCCATCAACATATCTATGTAATCTATGCGGGCACAGTTTTGTCAGCGAAACGGGATTATACAATCACAAGCAAATATCGCACACTAAAaaggAAATAGAAACAAGTACAACAGCTAAAATAGGCAAGTCCGATCCATTGTATTGCTCGGATTGTAAAATGGGATTTGTGAACGAGACAGCGTACAACACTCACCTCGGCAGCTCGTACAAACATACCACGGAGAACTTATCAACGAAACCGAACCGAACTCTGAAGAGACTGAAGGAAGACATCGACAGTGGAAAGAAAACTCGCGGTAGACCGTCACGAGGCGGCGTATGCTCTGACGTACTGTACAACGGCATTTCAACTTCCACCCAATGTGAAGTGTGTAATGTCGTGTTGCCAAGTGACGTGATGACGCGCAGACATTATGAGACTGAGCATCCTGGCGTTGACTATTTGAAGCGGTACATGTGCGACGTGTGCGGACACACCACAAAGCATTACGCCAACCTGCTGGTCCACATGCGCGTGCACACGCTGGAGAAGCCTTACGGCTGCCCGCACTGCGCCCGGCGGTTCAACAAGGTCGGCAACCGCGACCGCCACCTGGTGGTGCACACCGGCGAGCGGCGCTACGCCTGCCCGCACTGCGCGCGCCGCTTCACGCAGAGCACCGCCTGCAAGCTGCACGTGCAGACCGTGCACCTCAAGATCCCCTACGCGCCCTGGAACAAGAAGAACCGCCGCCAGAGGAAGgaGCAAGAGCTGGCAAGTAACGCGAGCACGTCGCCTGTGCCCGAAGTGGCAGCCCAAGTGACGATGGACCCTCAGGGCAACTATCTCAACGCTTACGTCACTTATAAAGACGATATATAA
- Protein Sequence
- MTCLLLYTPIKAGNWSVSRDELSHRRESPLAPALTSRHCTAWDAFAKPQTCPASVAPSRHRRLYPQKRQITTCGVDLVAGVVDSFRLNFTVAYGTPDPCPIRQIYAVPKTSPPCLLIKKSNLKDFKHTLFYIKPPLSFMSTDRLHLENTKFQWTKHNRIANSDVSNMNEVPKLNCFTLTSDNTLNSVTNASYLTENNDDNIKMLEISSTDLDVDNCLIKPEPEPQANVDLDTLTSNDTFNSVTNASYITENNDVIIKVIKSSSTDLDVDNCLIKPEPEPQANVDLDTLTSNDTFNSVTNASYITENNDVIIKVIESSSTDLDIDNSLIEPQANVDIIDFLSDYEEKDETDIVNVKNISEINEDPVDGSNLDQEYAIMIPISVKEAKAAVKVYKSFSYGRLHCKICNKPFYNENRLQVHMRMHDTHFSGSFHCDICDFYYKSDLLLKTHMTEKHMYKYLCRKCPEVSFHRRSAKQHYISSHLQKDERLHTKANGYDDIRPNWLSNKGRKQAKDVSTVKPTKKSKKVPDDFLIYTPVPHDEQYSLVLDRQNSKNYKKSNYKCNLCFRGFRETVPFEKHMAKHDPAISGPVQCDMCKLHFKNLRKLYNHMSMTHLSKYSCQMCSYVSYNRRQSVIHYRWHKNVTYPCPHCTMVFNKYSSQLTHIRLKHPSTYLCNLCGHSFVSETGLYNHKQISHTKKEIETSTTAKIGKSDPLYCSDCKMGFVNETAYNTHLGSSYKHTTENLSTKPNRTLKRLKEDIDSGKKTRGRPSRGGVCSDVLYNGISTSTQCEVCNVVLPSDVMTRRHYETEHPGVDYLKRYMCDVCGHTTKHYANLLVHMRVHTLEKPYGCPHCARRFNKVGNRDRHLVVHTGERRYACPHCARRFTQSTACKLHVQTVHLKIPYAPWNKKNRRQRKEQELASNASTSPVPEVAAQVTMDPQGNYLNAYVTYKDDI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -