Esim021068.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- iec1
- Assembly
- GCA_905147225.1
- Location
- LR990116.1:1125189-1131719[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 6.7 6.7e+02 2.0 2.7 3 21 466 484 464 488 0.92 2 12 0.0045 0.45 12.0 0.8 1 22 509 530 509 533 0.89 3 12 0.0021 0.21 13.1 2.6 1 23 547 570 547 570 0.96 4 12 0.01 1 10.9 0.5 1 23 575 599 575 599 0.90 5 12 0.0033 0.33 12.4 0.1 2 21 650 669 649 670 0.95 6 12 0.00011 0.011 17.1 0.5 1 23 729 750 729 750 0.98 7 12 4.5e-05 0.0045 18.3 0.1 1 23 756 779 756 779 0.95 8 12 8.4e-05 0.0084 17.4 0.3 2 20 799 817 798 819 0.92 9 12 0.13 13 7.4 2.2 2 23 828 851 827 851 0.96 10 12 0.3 30 6.2 4.9 1 20 858 877 858 880 0.95 11 12 0.0014 0.14 13.6 2.9 1 21 886 906 886 911 0.93 12 12 0.01 1 10.9 1.1 1 23 917 940 917 940 0.97
Sequence Information
- Coding Sequence
- ATGTTATCTCCCAGGGAAGACGACGATGATGATAGTCATCTCTGCATCAAGTGTAACGCAACCATAATTGGGTTGGAAAATTACGTTAAACATAGAAAAGAGAGATGTAGAAAAGTAAAATCTCATGGTCCGAAGCCTGAACTACCAATAGACCACTTAGAGCCTGGTGACAGTCTCGGAGCAGACGTATTCTTTCAATCTTTAGAATTACAGAGTAGTTTTAAGAAACCTTCTTTATCGAGACTGACTCCACCTATATCAAAAGACACCGGAGCCGGTTCAGAGGTGAAGTCATCTCTGGTGGTGTCAACTTCTTCTTCGGTAGTTTCTAGCTCTTCAAGTATTATTCCAAGAATAAGTCCCTTAGAAAGCGATCTTCGGGGTGAAGGTTGGATCGGTGGCCATAGCCTACGAATAGGGACTAGCGAGGACaatcaaacaaaattaataaatgctgTTGCTAGTATAAGTGGAAACGTAAAGAAAGATATAGCTACATCATCTTACAATATCGCCTACGATTATAAGGGTGACGATGATAGTGATGAGTCAGAGGAATCAGAAGAGGATGAGGAAGACGATCAACCTACTGGTGGTAAATGGAAACCGCCATCTAATTACACAGGAGGCAAATGGCATCCGGCATCGCCAGAGCAAGAAGAATGGGATATAAGAGACGATCAGGAACATACTGGTGGAAAATGGAAACCATTTCTTGGTGACAATAATGAGAGAGATGAAGATTACGATGCTCCACCACCTGGACACACCAAAGGTAAATGGATTCCTGGGGCCAATGACAAAACGCAAATTATGCAGACAACTATACAGACTAAAGGATCAGTACAATATTGGTGCGGACCTTGTAACCGACGACTTGGCTCTAGAACAATATACGATAAGCATCTTAGGTCtagtttacatttaaaaaaagtactGCCAGAGCATGAATTGGAGTTCGCCGGACATATAGTACCTATGAAAACCGTGACTGATGTTGACAAGCGGTCCTGTCGTACGCTGCGATTAGTAATTGATGGCCCGCAACCATCTCAAAGAAAACGAAAAGTTGACAgaaaatttaatgttaaaatagaAAAGAAGAAGAGGAGACGCAAGCCCAACTTTGTACACTGTTCTGGATGCAAGTCGCGCGTTAGGCAACATTTGATGGGCAAGCATTTAATATCTCATTACCACTTCAGAAAAGCAACAAACACAAACACAGTTGCTTATCAGGATCTAATTCTAGGTAATATTCACGCAATCGTCCACCAATCCCCGTTCCAATGCAGTCCATGTAAATTCTATACAAATTGGCTTTCAACTTTTATGCAACATTGGTTCTCTGAAGAGCACGAACAGAAATTAGAATCTATTGAGGGTAAATGCTGGTGCTCCTTCTGCAAATATGAATGTGAGACTTCTGAACAAATGCTCCAACACATATCTGGCTCGGATCACAGCGAAGTTGTTGCTGCTATAAACAGATCGATGCCTATTATTATAAGAAAGAGAACGGCTTTTATGTGTGCCAGTTGCAAAAAGGAATTTCGATATAATATAGAATTGAAACGCCATTCCCAGGTTACAGGACACATGCTGGCATTCACTGCAACTGATGAATACCAGGAGATGCACGTGTGCCAACATTGTCCAGCAAAGTTTAAATCATCCCTGACTTTGGCCGCTCATTTGAAATCAAAACATAAACACAAAGCCTTCCTTTGTCTAGTCTGTGCAAAATCTTTCAATTCCTCAGAGGAAGCGAAGCGTCATCGTCAGACTTCGGAGCATAGGATTAGAAGGAAAGAGAACATGAGAGAACAGGGAATACCTACAAAAGACATGAGTAAAAAATGTCCTTACTGTACTGAAActattattttgagaaatattttaCTACTGAAAGATCATATCAGGAGAGTGCATCCCAACATCAGGAAGAAGTGCCCCAAATGTGGAATGTCATTCATTCTCTCCCAAGAAGTGACCCGTCACGTTAGAGATAACGCGTGCGACTTTCAGTCTGCGAGCCAAATGGATTCTTCGATCTTCTGGAACTGTAGCCAGTGTCTTTTTACGACCGATTCGCAAGCTGAATGTTTCTTTCACGAGGTTTTGCATACAAGACCAAAGGAGGAGCTTCAAAAAGTTGGAGATTCAAAcaagattattttaaaatatccctGTCCTCTTTGTCCTAAGAGTTACAAGAAGGCTTCTCTGCGTCAACACCTGAGACAACACACATTTGAAAGGCCTTATGTCTGTTCGATTTGTGGTGCTAACTTCACCAGACAGGCTAGTTTGGCGAACCATTCAAAGAACGAGCATGGAGCTGACGTGAGCAAAGTTAAATTGCCAACAATTGCAGAAAGTATTGAGGATTGGGAATGTGATATCTGCAAGAAAAGATTTGCCAACAAGAGCGCTCTGTCCCGCCACTCAAGTACTTGTAGTCGCACTTCATCGACAAAGAAATGTCCGCACGAGCACTGCGCTTACATTGCATCGAGTACAGCACAATTAGCAAGACATCGCCGAACGCACGGAGAGCGGATAAAGCATCACGAATGTAGCATTTGCTCATTTAAGAGTGACCAGGCGAGCCATATGAAAAGACATATGGTTTGTCATGAAGGACTTAAGCCCTACCGTTGTCCACATTGCTCTTTCACTTGTGCAAGCCTGgagAATCTTCGCAAGCACGTGCTTCGCAGTGGTCGTCATTCTGGACTGTTCTTATATCATTGCCGATTATGTCCTTACAATACAAATACAGCTACTGATCTCCGAGTACATTTAACAACAGTACATTCAAACAAATATAATGCTAAATCGGCTGTCCAAGCAGTAAAAAAACATCTCATGGTTGATGTCAAAATGGAAACgaatatttga
- Protein Sequence
- MLSPREDDDDDSHLCIKCNATIIGLENYVKHRKERCRKVKSHGPKPELPIDHLEPGDSLGADVFFQSLELQSSFKKPSLSRLTPPISKDTGAGSEVKSSLVVSTSSSVVSSSSSIIPRISPLESDLRGEGWIGGHSLRIGTSEDNQTKLINAVASISGNVKKDIATSSYNIAYDYKGDDDSDESEESEEDEEDDQPTGGKWKPPSNYTGGKWHPASPEQEEWDIRDDQEHTGGKWKPFLGDNNERDEDYDAPPPGHTKGKWIPGANDKTQIMQTTIQTKGSVQYWCGPCNRRLGSRTIYDKHLRSSLHLKKVLPEHELEFAGHIVPMKTVTDVDKRSCRTLRLVIDGPQPSQRKRKVDRKFNVKIEKKKRRRKPNFVHCSGCKSRVRQHLMGKHLISHYHFRKATNTNTVAYQDLILGNIHAIVHQSPFQCSPCKFYTNWLSTFMQHWFSEEHEQKLESIEGKCWCSFCKYECETSEQMLQHISGSDHSEVVAAINRSMPIIIRKRTAFMCASCKKEFRYNIELKRHSQVTGHMLAFTATDEYQEMHVCQHCPAKFKSSLTLAAHLKSKHKHKAFLCLVCAKSFNSSEEAKRHRQTSEHRIRRKENMREQGIPTKDMSKKCPYCTETIILRNILLLKDHIRRVHPNIRKKCPKCGMSFILSQEVTRHVRDNACDFQSASQMDSSIFWNCSQCLFTTDSQAECFFHEVLHTRPKEELQKVGDSNKIILKYPCPLCPKSYKKASLRQHLRQHTFERPYVCSICGANFTRQASLANHSKNEHGADVSKVKLPTIAESIEDWECDICKKRFANKSALSRHSSTCSRTSSTKKCPHEHCAYIASSTAQLARHRRTHGERIKHHECSICSFKSDQASHMKRHMVCHEGLKPYRCPHCSFTCASLENLRKHVLRSGRHSGLFLYHCRLCPYNTNTATDLRVHLTTVHSNKYNAKSAVQAVKKHLMVDVKMETNI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00889696;
- 90% Identity
- -
- 80% Identity
- -