Esim004339.2
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990105.1:1192146-1194935[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.037 3.7 9.1 0.8 1 23 232 255 232 255 0.92 2 19 0.042 4.2 8.9 5.0 1 23 260 282 260 282 0.93 3 19 1.3 1.3e+02 4.2 0.4 2 23 286 307 285 307 0.88 4 19 0.0036 0.36 12.3 1.9 1 23 312 335 312 335 0.96 5 19 0.0015 0.15 13.5 0.1 2 23 396 418 395 418 0.96 6 19 0.0015 0.15 13.5 4.3 1 23 424 447 424 447 0.97 7 19 0.00027 0.027 15.8 0.2 2 21 451 470 450 471 0.93 8 19 0.034 3.4 9.2 0.2 1 23 479 502 479 502 0.91 9 19 5.6 5.6e+02 2.3 2.1 1 23 507 530 507 530 0.91 10 19 0.0054 0.54 11.7 0.6 2 23 543 564 542 564 0.96 11 19 0.0053 0.53 11.8 2.4 1 23 570 592 570 592 0.97 12 19 1.2 1.2e+02 4.4 0.2 2 10 597 605 596 609 0.85 13 19 0.036 3.6 9.2 1.9 1 23 625 647 625 647 0.96 14 19 0.0022 0.22 13.0 1.2 2 23 652 673 651 673 0.96 15 19 0.0041 0.41 12.1 0.5 3 23 687 708 685 708 0.96 16 19 0.0017 0.17 13.3 5.2 1 23 714 736 714 736 0.98 17 19 0.0039 0.39 12.2 5.8 2 23 743 764 742 764 0.96 18 19 0.0088 0.89 11.1 1.1 1 23 770 793 770 793 0.89 19 19 1.7 1.7e+02 3.9 0.9 2 23 799 821 798 821 0.94
Sequence Information
- Coding Sequence
- ATGGAAGAATTTGATGCAGCCAATAATCTCGAAAATGTTGAGTGGGTGAAACAAAAGCTGCAGGTGATATGGTCATCACCTAAGTTTTGTGGATTATGCTTACATAATAATGGGAATTTTTGTCCAGTAGACATGGAACTGATGATAAATAGACAGAAATTTTCTAGGTGTCTGAGGGATATTGTGAACTATGTTTTTAATGATGATGTTGAAAATTTAATGTCCAATTCCTATTTGTGTGATGGTTGTACAGAAAAGACAATAAATACTTTTCTATTCATTCACAACACTAAACAACTATCGAGAATTATGAAAAATGTTGTCAATGATATGTATTCCAAAGTGATTGATCTTGATGAACAACTCAATCCTACTTCACACTATAGTGATGCAATGATAGTTTTAGAGAATGATATCgatttatataaaagtataatacatacaaatacaacaGAAATTGTTCCAATTGCAGCACCTATACCCATGAGGATGGAGCCCCCTAAAGTGGTTACTTCTAAAAGAGAATTGGAACAGTCAGTTGAGAAACTGAAACAGATACCAAACATAATGGATGATTCATCAATAAAAAGTACAGAAAACCATGTATCCACACCAAACATATCATTGAAAAAGGGATGTATTGTTATAGAACCTTTGAGTTCAGATACAAATCTATCTCTAAGATATAATATACATGCATGCCCAAACTGCCCTGATATCTTTACAACATATAGATCATTGAAAGAACATGAGAAagcaaaacataaaaaaaaagtccacCGATGCATTTTTTGCAATAAGACATATAATAAAAGCCAAACTTTGAATATGCACTTGAAAACACATGCAAAAGTAAAATGTAAGTATTGTCGGGTGATATTACCTGATAGTGAACTAATGCAACACTTGAGAACCAAGCATAATAATTTAGTGTTCAGATGCAGATTCTGTGATCTTGTTTATTATTCTCAAGACTCGTTAATGACACACTTTAACAGCAATCATTTGATTAATTACACAACAATGAAAAGTCAGTGCATTATgtgtttaaacaattttaatgatGACTGTGTCaagacacacaaatgtaaatttttatgctCCGAGTGCTTTGTTATGCCCTGTatacattacaaatatttgaaatcatATAGAGAACAAACACTGAACCATCACAATAAAGTGAAATGTATGGATTGTGATTATGTGACAGATAGGAAAGACCTTTTAATATCACATGTGAACAGGGAACATCTAGATCATCATCCATTTACATGTGATCATTGTGAGCAACAATTTTACACTAAACTGAGTTTAAAAACCCATATACTGAAATTTCATCAGAATTTAAATTGTGAATATTGTGActtgaaatacaaagataaagATAATTTAGAGGAACACAAAAGGATTTGTAGCAGCTTTGTAAGACCATTTGCATGCAATAATTGTTCAGCATCATTTGACCTACAAGAAGAATTGATTAATCACGAGAGCTTGAAGCACAGTTCAAATGTCCATGCTTGTAATTTGTGTAATAGTAGATTTTTAACTCATATAAAACTAAAAGAGCATCAAGTGGTGGTGCATGGAGGTATTCAATTCAAGAAGAGAAGAAGACATATAGAATGTTCTCTTTGTGATATTATGTTTAGAAATGTCAAGGAAATGATTCATCATGAGAAAATGCATGGGCCAAAGGAAACCTTTCCATGCAAAGTGTGTTCGAAACAGTTTACTAGTCTAATGAAACTGTACACACACAATCAAAAGCATATTGATAAAATAAGATGTACTCATTGCGGTAAAGTTGTGGCTTTCTCGTTTTACCCCCAGCATGTTGTTAGATGTAAAATTGAAAAACCATTAAACCATGTTTGTGCAACATGTGGAAAAAGATTTCATATAAAATCTGTACTACTACTTCATGAGAAAGTTCATGCGAGGCATATAAAGTGTCCCCACTGTGAGAGGAAAGTAAACCAGAATAATTTAGAAAGTCACATAAAAAGGGTCCATACAGACAAAATAAAAGTTCTTAAACAACCTACAATAGCATGTGAATTATGTGGACATTTAGTTAGGAAAAAAGATGATTTAGAAACTCAtatgaacagataccatctgaAAATCAAACCATATATTTGTCATATATGCAGCAAAGATTTCTGTGGAAAGACACGTTTAAGAGACCATATGACCACTCACACAACTGATAATTCTTGTATCTGTTCAGTGTGTAATAAAAAGTTTGCCAATCGTGTTTGTTTGAAAATGCATTTTAGAATGCATACAGGTGAAAAGCCATATGAATGTGATATGTGTGGACAGAAATTCAGGTCTTCTAGCATTATGAATCTTCATAAAACAAAGACTCATTTGGAAAAAACTGTGTCCTGTCCCTTGTGTGATAGCATGTTCTACATAGTGAGAGAAATGAGGCATCATTTTAAAAGAGTCCATTGGAAGCATAAAGACAGGCCATTTAATGTGAGGCAAGTTGAAGAATTGTCTGAGagatattatcatttatttgaAGATGGGCGACTACCAAAATTGGGTGATTGA
- Protein Sequence
- MEEFDAANNLENVEWVKQKLQVIWSSPKFCGLCLHNNGNFCPVDMELMINRQKFSRCLRDIVNYVFNDDVENLMSNSYLCDGCTEKTINTFLFIHNTKQLSRIMKNVVNDMYSKVIDLDEQLNPTSHYSDAMIVLENDIDLYKSIIHTNTTEIVPIAAPIPMRMEPPKVVTSKRELEQSVEKLKQIPNIMDDSSIKSTENHVSTPNISLKKGCIVIEPLSSDTNLSLRYNIHACPNCPDIFTTYRSLKEHEKAKHKKKVHRCIFCNKTYNKSQTLNMHLKTHAKVKCKYCRVILPDSELMQHLRTKHNNLVFRCRFCDLVYYSQDSLMTHFNSNHLINYTTMKSQCIMCLNNFNDDCVKTHKCKFLCSECFVMPCIHYKYLKSYREQTLNHHNKVKCMDCDYVTDRKDLLISHVNREHLDHHPFTCDHCEQQFYTKLSLKTHILKFHQNLNCEYCDLKYKDKDNLEEHKRICSSFVRPFACNNCSASFDLQEELINHESLKHSSNVHACNLCNSRFLTHIKLKEHQVVVHGGIQFKKRRRHIECSLCDIMFRNVKEMIHHEKMHGPKETFPCKVCSKQFTSLMKLYTHNQKHIDKIRCTHCGKVVAFSFYPQHVVRCKIEKPLNHVCATCGKRFHIKSVLLLHEKVHARHIKCPHCERKVNQNNLESHIKRVHTDKIKVLKQPTIACELCGHLVRKKDDLETHMNRYHLKIKPYICHICSKDFCGKTRLRDHMTTHTTDNSCICSVCNKKFANRVCLKMHFRMHTGEKPYECDMCGQKFRSSSIMNLHKTKTHLEKTVSCPLCDSMFYIVREMRHHFKRVHWKHKDRPFNVRQVEELSERYYHLFEDGRLPKLGD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -