Basic Information

Insect: Euproctis similis
Gene Symbol: SCRT1
Assembly: GCA_905147225.1
Location: LR990107.1:21062308-21073081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 6e-07 6e-05 24.2 0.8 1 23 591 613 591 613 0.97

2 5 0.0029 0.29 12.6 0.0 2 23 623 644 622 644 0.97

3 5 6.2e-06 0.00062 21.0 0.4 1 23 648 670 648 670 0.97

4 5 8e-08 8e-06 26.9 0.2 1 23 676 698 676 698 0.98

5 5 5.5e-05 0.0055 18.0 2.9 1 21 704 724 704 725 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	6e-07	6e-05	24.2	0.8	1	23	591	613	591	613	0.97
2	5	0.0029	0.29	12.6	0.0	2	23	623	644	622	644	0.97
3	5	6.2e-06	0.00062	21.0	0.4	1	23	648	670	648	670	0.97
4	5	8e-08	8e-06	26.9	0.2	1	23	676	698	676	698	0.98
5	5	5.5e-05	0.0055	18.0	2.9	1	21	704	724	704	725	0.95

Sequence Information

Coding Sequence: ATGCCGCGCTGCTATATGGTAAAGAAAGGAGTTATCCGTCACGAGGGAAGACCACCACCCTGCAGCCCCACTGAGGCGAGTGTGGCACCACCGTGCTACAGCCCAGCTGAACATTCCACAACTGCAGAGCCAGAGATAGGAGAATATGAACGACCGTGGACCGAAAAGTACAGTGAACATTCAACGGATTATGACAAAACACGTATGGAATCTGAGAACGCTCATGCGATGGAATATTCGGATCCTCATACATCAGAATACATGGGGTCACGTATCGAATATGCCCAGCCGATTATTCCTAAAAATTCGGATTCTCATACAACAGCAGACTTCACGGCACCACGCAACGAATATGCCGAACCTCTCACCACCAAACAGTCAGATTATACTGGATCCTGTATCGTATACGCCGACCCTCTTACACCAGAGTATTCTGATCCTCCTACAACTGAGTCACGCATTCAATATGCTGAATCACTTACAAACGAATATTCAGACCCACACACATCGGAATACACAGAACCACGTATCCAATATGCTGAATCGCTTAGCTCGAAATATGCTCAGTCGCATACTACGAAAGACTATGACTACGAAAATACTCGAGGAAATGGTGTTATAGAACCGCGTATTATGTATGCAGCATCACAATCAGAATACAGGGAACCAAGAACACCCCACTACAGTTCACCGGGTACTCCGGACTACATTGAGCGCTTAGAATATGGTAAGCCACAGACGGAATACAGAGATAGCTCAAGTGGACGCGACGACGACCGACATAACCTTGTCTATGCAAGACCATATACACCAAACTATGCCGAGCAACATGGAGGATATGGAGAGCCACACAGTAAATGCTTAGAATTACAGACTCGTGCCAAGGATGTTGATATTGAGTTCTCCGAATCACGAGCAGAATCTGATGAGGGTGACTCTAGATTTTCTAACTCTATTAGTAGATGTAGGGAGGCTGATATTGAATATTCGGAACCGCTCACGAAGTATGGGGAGCTCAGTAATGTATATTCGGAAACAGATGGCAAGTGTGTCAGCTCGGACTATTCGGAGCCAAGAACTAAATATGAAGAATACAGAACAGAATATTCACCGCACAGAATCACACGACAGCCGGTTAGAGGTGAATTTTTAAATCAGAATCAGGAATCTAATACAGAGTGCACCGACTCAAATATGTCTGCATATGGAGATTCAAGTTCTGAAAACGTTCCTTCGCACAGTCAATTTTCAGAGCTAGTGTCGGAGAGGTCTGCTGCCGACACAGAAGCAGCACATGAACTATTGTCACTTGCACAGGGTTTGCCACCTCTCCCTGCTGCAGGTGTGGTGACTGTTGTGCAGGCACCAGAACCGACGCCAGTCCTCGTGCAGGCACCAGAACCAGCGCCAGTCCTCCCTGTTTACACCTATACTTTACAACCGACTAACATCTATATACTTACTGAAGAACCATCTGAATCTCCTTACCACACTGTGCAAACTTTACAGCCTGTGGAATTCGTCGATACAGAGATCAGCTATGTAGATTGCCACCAAGTTCCACCCAATACAGCTGAATATCCCTGTAAGAAAGCAAAGTTTGATTCGAAATCGAGATTAGCCTCGAGACCACTGAGGATCTCAGTACGGGATATAGAACACAAATCAGAATCAGCAGAAATGCACGATCTAGAGTCCGGACAGGAGCACGAGTCTGACTCACCAGACAGTGAACATGATACGCCACACCCTAAGGCAAAACAGACGAAGTTTGATTGTGGTATTTGTGGTAAACGCTACGCAACATCCTCAAATTTATCACGACATAAACAAACCCACCGAAGCCTGGATTCGCATGCAGCCAAGCGATGTGGTGAGTGCGGCAAGGCATATGTGTCGATGCCAGCGTTAGCTATGCACGTTTTGACGCACCGTATGGGTCATGTTTGTGCTGTTTGTGGTAAGCAATTCTCTAGACCTTGGTTATTGCGCGGGCACTTGCGTTCTCACACCGGTGAGAAACCTTACAGCTGCGAGTCATGCGGCAAGGCGTTCGCGGACCGCTCTAATTTGCGCGCCCATCTGCAAACCCACTCCGCTGATAAGAAGTACCAATGTAAGCGTTGCCATAAAACGTTTGCACTTAAGAGTTACCTGAATAAGCACCAGGAATCGGCCTGTGTGCGCGAAGATGGCGCAGCATGA
Protein Sequence: MPRCYMVKKGVIRHEGRPPPCSPTEASVAPPCYSPAEHSTTAEPEIGEYERPWTEKYSEHSTDYDKTRMESENAHAMEYSDPHTSEYMGSRIEYAQPIIPKNSDSHTTADFTAPRNEYAEPLTTKQSDYTGSCIVYADPLTPEYSDPPTTESRIQYAESLTNEYSDPHTSEYTEPRIQYAESLSSKYAQSHTTKDYDYENTRGNGVIEPRIMYAASQSEYREPRTPHYSSPGTPDYIERLEYGKPQTEYRDSSSGRDDDRHNLVYARPYTPNYAEQHGGYGEPHSKCLELQTRAKDVDIEFSESRAESDEGDSRFSNSISRCREADIEYSEPLTKYGELSNVYSETDGKCVSSDYSEPRTKYEEYRTEYSPHRITRQPVRGEFLNQNQESNTECTDSNMSAYGDSSSENVPSHSQFSELVSERSAADTEAAHELLSLAQGLPPLPAAGVVTVVQAPEPTPVLVQAPEPAPVLPVYTYTLQPTNIYILTEEPSESPYHTVQTLQPVEFVDTEISYVDCHQVPPNTAEYPCKKAKFDSKSRLASRPLRISVRDIEHKSESAEMHDLESGQEHESDSPDSEHDTPHPKAKQTKFDCGICGKRYATSSNLSRHKQTHRSLDSHAAKRCGECGKAYVSMPALAMHVLTHRMGHVCAVCGKQFSRPWLLRGHLRSHTGEKPYSCESCGKAFADRSNLRAHLQTHSADKKYQCKRCHKTFALKSYLNKHQESACVREDGAA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -