Esim016990.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990112.1:19548380-19562629[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.18 18 7.0 1.1 1 22 290 311 290 314 0.91 2 10 0.0012 0.12 13.8 2.7 2 23 438 460 437 460 0.94 3 10 0.0045 0.45 12.0 0.1 1 23 466 488 466 488 0.95 4 10 0.029 2.9 9.5 0.2 1 23 499 522 499 522 0.88 5 10 2.3e-07 2.3e-05 25.5 3.5 1 23 527 549 527 549 0.98 6 10 4e-06 0.0004 21.6 0.9 1 23 555 577 555 577 0.98 7 10 0.00023 0.023 16.0 5.1 1 23 583 605 583 605 0.97 8 10 8.9e-07 8.9e-05 23.6 0.1 1 23 611 633 611 633 0.97 9 10 0.00083 0.083 14.3 2.4 1 23 639 661 639 661 0.98 10 10 0.00047 0.047 15.1 0.6 1 23 688 710 688 710 0.98
Sequence Information
- Coding Sequence
- ATGGAAGTATTTCTCTATAATTCTAATGTTTGTAGATTGTGTGGCGAAGAAAACGATAATGGAACGTTCTTATATTCATGCGACGAAAATAATACAAACTTAAATGAagttattaacaaatatttaccaaTCAAGgtCATAGACGATGGGCAACTACCTCGCACTATTTGTCCAGGATGCACCATTCAACTGGAGGCCACCGTAGAATTTTTAACACTAATAGTAAATGGACAAAAAGTTATCCGCGACCTTCACTTCAGAGAAAAGGAATATAAAAAGTCAATATTAAATCCAATATCCGAGCAAGATGTTATTACAGAAAAGATTGTATATGAAGTCAACACTACTGATGGTATATATCAAGTGGAACACCCGATTGCATTACAAGTAGCTGGTCTTGAAAAACCTAAACGTAAGAGAGGTAGACCTCCAAAAAAACATAAATCTCCTCAAGAATTGGCCGAAGAAGTTGTGGCTAAAAAAACAGatataaaatctttaaaaaaaattgataacgaAGAAGAGCCCACAGGAAAGAGGAAAAGGAAGACACCAACTAGATTTAGAGAAGCTGTACAAGGCAAGGAACTAGAAAGGATATTCAAAGAGGAAGGTGTCACAGATGGGGAGGAGAGTGATAAAGATGTTAAACCAACTGTTAGCAGTGACATGAAGGCGCCCAAAGAGCCAGAGATTATTGGGCACCTAGAGAACTCTGGTGAGCTAGTGGTGTTTGCTAAAGGAAAGGGCAGAGGTAGACCAAAGGGTCCATTACGGCCCACTCGCAAGGAATGTGCCATCTGTGGTATGGAATTTTTATGCACAGGTCGTTATATGTCGCATGTGGCTCAACATGGCCCTGTTCTGTATCAGTGTGATGAATGTAAAGACAATTTTAACACACATTTGGAGTTTGTCAACCATCAGAAGGAGGTGGGACACACTGGAAAGAACATTATACAACTTAATAAAAAGAAAGCTCAAAAAGTTCAGAACAAAGTAGATGAAGTTGCATTAGATACTCAAGTTGTTGATCAGCCGTCTGTAACTAGTCCAGCTAATATCATTGCAAGTTTACCGGTTGATGATGTGATGACATCACTACCTGACCTAGACACACAGCCAGTCTCCACACAGTCTGATGTTAACTTACTGATGCAAGTAGATAGTTCGTCTCTTGAGGTTGCCTCTAATGCTAATGTGGAAACAGTTGTTGTAATTAATGaaaaCTCGGCAGATTCACAAGAAGTTGCCAAAGAAAGTAATGAGGTAGTCCTTACTGAGACAAGCCCAACGGGGAAAGTGAGACTGAAGTGTAATCACTGTGAGAAGACATTTAGCAACAAGCAGAGCAAATCACTGCACATTAAGGCTGCCCACCTGGGCGAGCGGCCCCACGCGTGCGGCGAGTGCGGCGCGCGCTTCGCCTACCCGCGCTCGCTGGCGCTGCACGCGCTCTCGCACCGCCGCCACCGCGCGCGCGCCAGCCACGGGTTCGCCTGCGACCTGTGCGGCAAGGTTCTGAATCATCcatcatccgtggtgtaccacAAGGAGGCTGAGCATGCGGGACAGCGCTACGTGTGCAATAAATGCGGCAAGTCCTTCAAACACAAACAGTTGCTACAGCGACATCAACTTGTGCACTCGCAGCTGAGACCATATACATGCACGACATGCAACGCTTCATTTAAAACAAAAGCGAATCTTATTAACCATCAGTTGTTGCATTCCGGTGTCAAGAAATTCGCGTGCGAGTTGTGTAAGCACAGGTTTTCACATAAAACCAGTTTGACATTGCACATGAGGTGGCACACCGGTCAGAAGCCGTTCGCGTGCGGCACGTGCGGCAAGAGCTTCAGCCAGAAGGGCAACCTGGCGGAGCACGAGCGCATCCACACGGGCGAGAAGCCCTTCCAGTGCTCGCTGTGCGCGCGCCGCTTCACCACCTCCAGCCAGCGCCGCCTGCACGCGCGCCGCCACGGGCCGCACAAGAGGTTGGTAGCGCGCGGCCCCCGGCGCGAGGCCCGCGACCCACGCGAGGCCCGTGAGGCCCGGCCGCATCGCTGCGCCGTGTGCTCGCGCACGTTCGCCGAGCGTGGCCCGCTGCTGCGTCACGTGCGCACACACGCCCGCGCCCCGCACGCCAACGTCACGCAAGTGCACAAACAGATGAGCTTGCTGACGAGCTCGCAACCTGAGCTGGCGCCGCCCCCTCAGACCATGGAAGTGGCGGAGCTGGCGACGGACGAGTCCCAGGAGTCCAACGAGCGCGTTATCTACGTCACGTACCAAATGAGCGAGCCGGGCTCGCCCCCTTACCACGTGGTCGCTACCCCTGAACAGACATCAAATGTGGACGAAGATGGAATGGTAGAGCCCTGTGAATTGTACACTGGACCGTCCATGCTGGTACCGAAGACTAAGCTGGAACCTTTGCAACTGCAGGACGAGGAGCTAGAGCAGGATGAGCTGCAGCTGGAACAGCTTGTGTTGGAGCCACGGGAGCACATGCCTGTGACAGATGAGGAAGGCAATCCACTTCATTTCACAATGCAAGATGGCACACGACTTGCAATCACGTCTGCAGATGGAAAATCTTTGCagGTTATCACAAAAGATGGTCAAACTATACCTGTCGAGATCAATGGATATGCTGATGAGGAGGAGGTAGATAATGCAGACACGATTGTACATCAGCTGAACTTGCAGATCAGTATCGACTCTGAAGTGCCTTCGCCGCAAGCTCAGTACTTCACCATCGTATGA
- Protein Sequence
- MEVFLYNSNVCRLCGEENDNGTFLYSCDENNTNLNEVINKYLPIKVIDDGQLPRTICPGCTIQLEATVEFLTLIVNGQKVIRDLHFREKEYKKSILNPISEQDVITEKIVYEVNTTDGIYQVEHPIALQVAGLEKPKRKRGRPPKKHKSPQELAEEVVAKKTDIKSLKKIDNEEEPTGKRKRKTPTRFREAVQGKELERIFKEEGVTDGEESDKDVKPTVSSDMKAPKEPEIIGHLENSGELVVFAKGKGRGRPKGPLRPTRKECAICGMEFLCTGRYMSHVAQHGPVLYQCDECKDNFNTHLEFVNHQKEVGHTGKNIIQLNKKKAQKVQNKVDEVALDTQVVDQPSVTSPANIIASLPVDDVMTSLPDLDTQPVSTQSDVNLLMQVDSSSLEVASNANVETVVVINENSADSQEVAKESNEVVLTETSPTGKVRLKCNHCEKTFSNKQSKSLHIKAAHLGERPHACGECGARFAYPRSLALHALSHRRHRARASHGFACDLCGKVLNHPSSVVYHKEAEHAGQRYVCNKCGKSFKHKQLLQRHQLVHSQLRPYTCTTCNASFKTKANLINHQLLHSGVKKFACELCKHRFSHKTSLTLHMRWHTGQKPFACGTCGKSFSQKGNLAEHERIHTGEKPFQCSLCARRFTTSSQRRLHARRHGPHKRLVARGPRREARDPREAREARPHRCAVCSRTFAERGPLLRHVRTHARAPHANVTQVHKQMSLLTSSQPELAPPPQTMEVAELATDESQESNERVIYVTYQMSEPGSPPYHVVATPEQTSNVDEDGMVEPCELYTGPSMLVPKTKLEPLQLQDEELEQDELQLEQLVLEPREHMPVTDEEGNPLHFTMQDGTRLAITSADGKSLQVITKDGQTIPVEINGYADEEEVDNADTIVHQLNLQISIDSEVPSPQAQYFTIV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -