Basic Information

Insect: Euproctis similis
Gene Symbol: -
Assembly: GCA_905147225.1
Location: LR990108.1:17289095-17292628[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.54 54 5.4 1.9 3 23 39 60 37 60 0.91

2 14 0.00033 0.033 15.6 1.6 1 23 98 121 98 121 0.94

3 14 0.00098 0.098 14.1 3.1 1 23 123 145 123 145 0.97

4 14 5.8 5.8e+02 2.2 0.5 1 19 154 172 154 176 0.71

5 14 0.019 1.9 10.0 0.1 1 23 181 203 181 203 0.97

6 14 0.078 7.8 8.1 6.1 1 19 259 277 259 281 0.94

7 14 5.7e-05 0.0057 18.0 0.1 1 23 287 310 287 310 0.92

8 14 0.00011 0.011 17.0 1.0 1 23 320 343 320 343 0.98

9 14 0.00013 0.013 16.8 0.2 1 23 348 372 348 372 0.97

10 14 0.16 16 7.1 2.5 3 23 380 400 380 400 0.98

11 14 0.0018 0.18 13.2 0.4 1 20 405 424 405 427 0.93

12 14 0.0018 0.18 13.2 0.8 1 23 433 455 433 455 0.96

13 14 1.2e-05 0.0012 20.1 1.6 1 23 461 483 461 483 0.96

14 14 5.5e-06 0.00055 21.2 1.1 1 23 489 512 489 512 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.54	54	5.4	1.9	3	23	39	60	37	60	0.91
2	14	0.00033	0.033	15.6	1.6	1	23	98	121	98	121	0.94
3	14	0.00098	0.098	14.1	3.1	1	23	123	145	123	145	0.97
4	14	5.8	5.8e+02	2.2	0.5	1	19	154	172	154	176	0.71
5	14	0.019	1.9	10.0	0.1	1	23	181	203	181	203	0.97
6	14	0.078	7.8	8.1	6.1	1	19	259	277	259	281	0.94
7	14	5.7e-05	0.0057	18.0	0.1	1	23	287	310	287	310	0.92
8	14	0.00011	0.011	17.0	1.0	1	23	320	343	320	343	0.98
9	14	0.00013	0.013	16.8	0.2	1	23	348	372	348	372	0.97
10	14	0.16	16	7.1	2.5	3	23	380	400	380	400	0.98
11	14	0.0018	0.18	13.2	0.4	1	20	405	424	405	427	0.93
12	14	0.0018	0.18	13.2	0.8	1	23	433	455	433	455	0.96
13	14	1.2e-05	0.0012	20.1	1.6	1	23	461	483	461	483	0.96
14	14	5.5e-06	0.00055	21.2	1.1	1	23	489	512	489	512	0.98

Sequence Information

Coding Sequence: ATGGAATCACCAATTTTATCGAACGAGAGTGGGGCCGAGTGGCAGTTAGACCTGGACGATATTATCGCAGGATGCCCTAGGCTGACTGCGATTGACTTTATCGGCGGCATCTTTTGCAATCTATGTCACTCTACATTCATTAATAAGAAAGTATTTGACCGACACTACATTGAGCAACACAATAAATTGATTAAAGACATAGTATACACTTGCGTAGTATGTCGCAGAGAAATATCCCCATATCCAAGTTTTCGTAACCACTGCTACCTAGCCCAtgtcaataaaaacaagttcaAgtGTCAATACTGCAACAAACAATTTTCCAAACAATCTATTCTGAACAATCACGTGGATTCTGTGCATTTTTTCCGATGTGCCAGTTGTCAGAAACAATTTCCAACTAAATCTGAACTGCATACACATAAAAGCATTCATAAGAGAATACAGAATAAGCCTCCTTATCCTTGCAAGCAATGTTCCAAAGCCATTGAAAACGTAGATATGTGCGAATTGCATATAGATGAACACAGCAAAATTTTGTACCCATGTCCAATCTGTAATGAAACTGCGAGCAGCAAAATTGAAACTGCAACACATCTCACAAAGCATTTCAATGAAGTGATTACAAGTGAAATTATCACAACAGAAACGAGTGAATATTGCTCTGTGGATATGCTTGGTGGAGTACTTTGCTGCTACTGTGATGAACTATTCAAGGATCGGTTGGATATTGATCTTCATTTCATCAATGAACACTCAGACAAGGAAATTGTTTACACATGCAACATTTGTGGGAAACAATATAACACTTATTATTTGTTTGCCAATCATTGCCACTTTCATGCgtccaaaaataaatttgaGTGTGTAGAGTGCGGTAAGTTTTTTGCGCGGCTATCTCTCCTCATAGTCCACACTGAAGCTTTTCATTCAAACGGCACAGCTGATGAGAAACCATTTACTTGCATGGAGTGTGGACACGCTTTTGGTACAGAAGTGCGTCTCAGAAAACATCTTCGTACAGTGCATACTATCAACAGCTTCACATGTCAAGAAAAAGGATGTGAAATGGTGTTTGAAACACCTAGAGACCTAATTATCCATCAACGCAAGCATCAAATATGCCGTGACAACTGGTGTCGCCAGTGTGGCCTACAGTTCACTACACTCTCTTCCTGTCAGGTCCATCTTGATACTCACAGGAAAAAATTGTACTCTTGCCCCATCTGCAACAAACAATACCgcgaaaaatatttgattatgaAACACATACCATCACACTTTGAAGCGATACTGCATGTGTGCAAAGTTTGTGGCAAAGCATTTAACGCTAGATATAGATTGGttgaacataataaaatccACTCTGAAATAAGGAATCACATATGCACTTATTGTGGTAAAGGATTCATAAAACCACATCAATTGGTACAACATTTGAACATACACACAGGTCTTAAGCCTTACAAATGCGCTGTGTGCACAAAAACATTCGCCAACTACCCTAATTGGATGAAACATATGCGCAAAACACACAAAATTGATGGCGAAGATTTGAAGAAACTcgctgaaaataataaaataccaaaTAAACAGATTGCTGCTATTGATAATCAAAATATAGAAAAGAATGATGGTGAAGTTAAAAGTGATTCTGGAATAGAATCCTTGAGCCCTGAAATGCCCATTCAGACATATAATTTTGTCAACAATGAATCTGATGATAGTAACGTAGAAAGCACTAAAAATTTAAAGATAGAAAATGATTGGTCCATTATTAACGAAACTACCTCACACAACAGTAGTCTTCATTATATGGATATGCTCCCCATAACGAATATTACGTTTGATTCAGATATAAAAGTGACTTCAGCTGAAAATTCAATCATACCACCAAGCACTGTATTGCCAGAGTATGGACCAGAATTGACTATTGACGACCAGGATCTGCCACACATTGACCCGTTGCTCACTATACGTCAAGACCCTTCCTTCACAGTCCCACAGCATTCCTGGGAGCCGTACATAACAAAGGTACACGATACTTACGATGCaaatgatatgaatataatttccTTTATGAACACTGATATTTACTaa
Protein Sequence: MESPILSNESGAEWQLDLDDIIAGCPRLTAIDFIGGIFCNLCHSTFINKKVFDRHYIEQHNKLIKDIVYTCVVCRREISPYPSFRNHCYLAHVNKNKFKCQYCNKQFSKQSILNNHVDSVHFFRCASCQKQFPTKSELHTHKSIHKRIQNKPPYPCKQCSKAIENVDMCELHIDEHSKILYPCPICNETASSKIETATHLTKHFNEVITSEIITTETSEYCSVDMLGGVLCCYCDELFKDRLDIDLHFINEHSDKEIVYTCNICGKQYNTYYLFANHCHFHASKNKFECVECGKFFARLSLLIVHTEAFHSNGTADEKPFTCMECGHAFGTEVRLRKHLRTVHTINSFTCQEKGCEMVFETPRDLIIHQRKHQICRDNWCRQCGLQFTTLSSCQVHLDTHRKKLYSCPICNKQYREKYLIMKHIPSHFEAILHVCKVCGKAFNARYRLVEHNKIHSEIRNHICTYCGKGFIKPHQLVQHLNIHTGLKPYKCAVCTKTFANYPNWMKHMRKTHKIDGEDLKKLAENNKIPNKQIAAIDNQNIEKNDGEVKSDSGIESLSPEMPIQTYNFVNNESDDSNVESTKNLKIENDWSIINETTSHNSSLHYMDMLPITNITFDSDIKVTSAENSIIPPSTVLPEYGPELTIDDQDLPHIDPLLTIRQDPSFTVPQHSWEPYITKVHDTYDANDMNIISFMNTDIY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -