Esim004383.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990105.1:1922808-1927457[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.035 3.5 9.2 6.4 1 23 157 180 157 180 0.95 2 18 0.00029 0.029 15.8 0.9 1 23 189 212 189 212 0.96 3 18 0.014 1.4 10.5 0.4 2 23 225 247 225 247 0.97 4 18 0.0011 0.11 13.9 1.0 1 23 256 279 256 279 0.97 5 18 0.00026 0.026 15.9 2.8 1 23 291 314 291 314 0.97 6 18 0.00022 0.022 16.1 1.0 2 23 342 364 341 364 0.97 7 18 0.0013 0.13 13.7 1.2 2 23 374 396 373 396 0.96 8 18 0.056 5.6 8.5 0.8 2 19 401 418 400 420 0.93 9 18 0.00055 0.055 14.9 0.3 2 21 426 445 425 448 0.94 10 18 0.022 2.2 9.8 0.3 3 23 458 479 456 479 0.95 11 18 0.00039 0.039 15.3 3.8 1 23 484 507 484 507 0.94 12 18 0.00069 0.069 14.6 1.3 2 23 519 541 518 541 0.95 13 18 0.0098 0.98 10.9 5.4 1 23 563 586 563 587 0.93 14 18 0.1 10 7.7 0.1 2 23 593 614 592 614 0.94 15 18 0.00054 0.054 14.9 1.7 2 23 620 641 619 641 0.97 16 18 2.8 2.8e+02 3.2 1.6 3 23 649 671 647 671 0.90 17 18 0.0096 0.96 11.0 0.2 1 23 707 729 707 729 0.97 18 18 0.31 31 6.2 2.8 1 23 735 758 735 758 0.97
Sequence Information
- Coding Sequence
- ATGTCAGATGCAGAAATAAATATGGCAGACAAAGATATAAAAgtagaaattaaaattgaaagaaAAGATCCTACCTCATTTTTACCTGAAGAACCTATgtgttatgaaataaaaaagaagaagaaaaagaaaaaaaagaaggaGTTACTAGAGGATCCACTTAAAGACTCTCAGGATAAACTGGATGTAAAATGTACTCTAACAGACTTAGTTCCAGTTAGTTTTGACCCTGAAGTGAATATCAAAGTGGAAAATATAGAAGTGGAATTAGATTTCAATGAtTTTACCGACAGCGCTGGTCTTATGCTGGAAACTCCGCATAGTGACGAGAGCCAGGAACCCGCAGTGAAGATAGAAAATCAAAATCACGAAGCAGTTATTCTCACCTTCGAAAATGTTAtcaatacaaaaacattgctaCCTCAATCAACTATCCAAGACGAATTGCCTCTTCCAAAAGCAGCTGGACACTTTTGTAAAATCTGCCACCTTGTCTTCCAGACAGTTAAAACACTTCGGATGCATCAGAAAAGAAAACACAAGGTTTTTAGGAAATCGTTTAAACACATCTGTGATTACTGTGGAATGTCATACGAAATGAAAAACAGCTTAGTAGCACATATAAAACGAAAACACGGTCCGGAATCCTTGCCAGATGACAGAGAAGAGAGAACTTGTGACATTTGTGCCCTGGTATTCAAGGGCATGGCAAGGTTACGAATGCACATGAGAAGGAAACATGGCTCTTTCCAAGAGTCCTTTAAACATGAATGTGCAGATTGCGGCCTGACTTACGACAAGTATAGAAGTTTGATGGTACACATACAACGTAAACATACAAATCAGAGAAAACCAGACCTCAATGAGTTTTACAAATGTGTATTTTGTCCCAAGATGTTCAATAGAAGAGAAACTTATTCAAGACATGTACAACGAAAGCACCTCGTTTCTGAAGACGATATAAAACAAGAAACCGACGACCTTAATTTGGAAAGTTGTAAAAATGAGCAAACCGGAGAAATTACTTGCAATCAATGTCCTTTAGTCTTTTCTTCAATGAATTTCTTAAAATTGCACATGAGACGGAAACACAATGCTCTGAGAGAAAACTTTAGATTAAAATGTAGGATTTGTAATTTATCTTACGAGAAGATTGAAAGTTTGAAGCGACATGTCCGGCGTAAACATGATAAAGGGTCATACTGTGAAGTATGCAACAAACAGTTTGATACAAGAGAAATGTATTTAAACCATTCACATGCGAAAATCATTAAAGAATGCCCAGTTTGTGGTCTCATATTTGCTTCGCAAGGTGGCTTAGCGAAACACTTGAGGTGTACTCATAAAATGGATTCACCTAAAACTATCTTTTGCAATTTGTGCAATGAAGGTTTCAATGAAAAACGTCAACTGAGACCGCATATCATGAAGGTGCATTTAAATGTTTGTTATACatgtaaattttgtaaaaaggtATTCAAAGCAAAGGAGAGTTACCGCCGTCACATTCTATTTAAACATCCCACAGGAGAAGTCATCAATACAGAGCAACAGAAATGTGAACAGTGCTCTGAAATGTTCAATGATGAGTTTGAGCTGTGCAGACATATAAACTTAATACACGGCCAGTTGGATAATAGTCTATCAAGTCTGATAAAGAGAGAAGATGAGGATGTCAAAAATAACTTCCATTGCATGAAATGTCCGGAAGTTTTTATTACATGGGAAGAATTAAAAGTGCATCACGAACAGTGCCATCATAATGTGGCGCAGACGCAATGTCAAGTATGTGGTGAAATATTGCCAAGCAATGAACTACAGAAACACATCAAAAATTTACATGTTGATAATGATATTCAGTGTAAATATTGTGAATTCAAAACTAATGTTAAAAGTAGTTTGACTCAACATATGTTGAGGCATAAGAATGCTGCGACTATACACTGTAATTATACAGGATGTagatataaaacattttatgaGGGTGCTAtggaaaaacatataaaaaaacatgCTGACCAAGGAGTCAAACTCCAATGTACTCAGTGTACCTTCCAAACtatgaataaatacatattgaaATATCACGAGGAAGCTCATGAGACGGGTGTTAAAAGGTATACATGCGACCAATGTGATTATGCTACAATATTACCAGCTAATTTAGTTCAACACAAATACAAGCATTCAACAGAGAAACGATTCAAATGTGATGTTTGTTCATTTGCAACAAAATACAACACCTCTCTCCGATTTCATGTTAGAAAAAAACATTGTGATCTCCCTACATTCAGCAAATAG
- Protein Sequence
- MSDAEINMADKDIKVEIKIERKDPTSFLPEEPMCYEIKKKKKKKKKKELLEDPLKDSQDKLDVKCTLTDLVPVSFDPEVNIKVENIEVELDFNDFTDSAGLMLETPHSDESQEPAVKIENQNHEAVILTFENVINTKTLLPQSTIQDELPLPKAAGHFCKICHLVFQTVKTLRMHQKRKHKVFRKSFKHICDYCGMSYEMKNSLVAHIKRKHGPESLPDDREERTCDICALVFKGMARLRMHMRRKHGSFQESFKHECADCGLTYDKYRSLMVHIQRKHTNQRKPDLNEFYKCVFCPKMFNRRETYSRHVQRKHLVSEDDIKQETDDLNLESCKNEQTGEITCNQCPLVFSSMNFLKLHMRRKHNALRENFRLKCRICNLSYEKIESLKRHVRRKHDKGSYCEVCNKQFDTREMYLNHSHAKIIKECPVCGLIFASQGGLAKHLRCTHKMDSPKTIFCNLCNEGFNEKRQLRPHIMKVHLNVCYTCKFCKKVFKAKESYRRHILFKHPTGEVINTEQQKCEQCSEMFNDEFELCRHINLIHGQLDNSLSSLIKREDEDVKNNFHCMKCPEVFITWEELKVHHEQCHHNVAQTQCQVCGEILPSNELQKHIKNLHVDNDIQCKYCEFKTNVKSSLTQHMLRHKNAATIHCNYTGCRYKTFYEGAMEKHIKKHADQGVKLQCTQCTFQTMNKYILKYHEEAHETGVKRYTCDQCDYATILPANLVQHKYKHSTEKRFKCDVCSFATKYNTSLRFHVRKKHCDLPTFSK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -